310410. Phylogeny and comparative analysis


Title310410. Phylogeny and comparative analysis
Parent3104. Evolutionary biology

Latest research outputs

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Fungal diversity notes 1387–1511: taxonomic and phylogenetic contributions on genera and species of fungal taxa
Boonmee, Saranyaphat, Wanasinghe, Dhanushka N., Calabon, Mark S., Huanraluek, Naruemon, Chandrasiri, Sajini K. U., Jones, Gareth E. B., Rossi, Walter, Leonardi, Marco, Singh, Sanjay K., Rana, Shiwali, Singh, Paras N., Maurya, Deepak K., Lagashetti, Ajay C., Choudhary, Deepika, Dai, Yu‑Cheng, Zhao, Chang‑Lin, Mu, Yan‑Hong, Yuan, Hai‑Sheng, He, Shuang‑Hui, ..., Hyde, Kevin D.. 2021. "Fungal diversity notes 1387–1511: taxonomic and phylogenetic contributions on genera and species of fungal taxa." Fungal Diversity. 111 (1), pp. 1-335. https://doi.org/10.1007/s13225-021-00489-3

Article

Global genomic analyses of wheat powdery mildew reveal association of pathogen spread with historical human migration and trade
Sotiropoulos, Alexandros G, Arango-Isaza, Epifanía, Ban, Tomohiro, Barbieri, Chiara, Bourras, Salim, Cowger, Christina, Czembor, Paweł C., Ben-David, Roi, Dinoor, Amos, Ellwood, Simon R., Graf, Johannes, Hatta, Koichi, Helguera, Marcelo, Sánchez-Martín, Javier, McDonald, Bruce A., Morgounov, Alexey I., Müller, Marion C., Shamanin, Vladimir, Shimizu, Kentaro K., ..., Wicker, Thomas. 2022. "Global genomic analyses of wheat powdery mildew reveal association of pathogen spread with historical human migration and trade." Nature Communications. 13 (1). https://doi.org/10.1038/s41467-022-31975-0

Article

Population Structure of Pyrenophora teres f. teres Barley Pathogens From Different Continents
Dahanayaka, Buddhika A., Vaghefi, Niloofar, Knight, Noel L., Bakonyi, Jozsef, Prins, Renee, Seress, Diana, Snyman, Lisle and Martin, Anke. 2021. "Population Structure of Pyrenophora teres f. teres Barley Pathogens From Different Continents." Phytopathology: International Journal of the American Phytopathological Society. 111 (11), pp. 2118-2129. https://doi.org/10.1094/phyto-09-20-0390-r

Article

The role of internal transcribed spacer 2 secondary structures in classifying mycoparasitic Ampelomyces
Prahl, Rosa E., Khan, Shahjahan and Deo, Ravinesh C.. 2021. "The role of internal transcribed spacer 2 secondary structures in classifying mycoparasitic Ampelomyces." PLoS One. 16 (6), pp. 1-28. https://doi.org/10.1371/journal.pone.0253772

Article

Systematics and enzymatic activity of Foliar ascomycetes (Fungi) on Lepidozamia peroffskyana and Macrozamia lucida in Eastern Australia
Bartrop, Lachlan D.. 2021. Systematics and enzymatic activity of Foliar ascomycetes (Fungi) on Lepidozamia peroffskyana and Macrozamia lucida in Eastern Australia. Masters Thesis Master of Science (Research). University of Southern Queensland. https://doi.org/10.26192/q73yw

Masters Thesis

Phytophthora species isolated from alpine and sub-alpine regions of Australia, including the description of two new species; Phytophthora cacuminis sp. nov and Phytophthora oreophila sp. nov
Khaliq, Ihsanul, Hardy, Giles E. St. J., McDougall, Keith L. and Burgess, Treena I.. 2019. "Phytophthora species isolated from alpine and sub-alpine regions of Australia, including the description of two new species; Phytophthora cacuminis sp. nov and Phytophthora oreophila sp. nov." Fungal Biology. 123, pp. 29-41. https://doi.org/10.1016/j.funbio.2018.10.006

Article

Diversity of Moesziomyces (Ustilaginales, Ustilaginomycotina) on Echinochloa and Leersia (Poaceae)
Li, Ying-Ming, Shivas, Roger G., Li, Bao-Ju and Cai, Lei. 2019. "Diversity of Moesziomyces (Ustilaginales, Ustilaginomycotina) on Echinochloa and Leersia (Poaceae)." MycoKeys. 52, pp. 1-16. https://doi.org/10.3897/mycokeys.52.30461

Article

The origin and diversification of the Entorrhizales: deep evolutionary roots but recent speciation with a phylogenetic and phenotypic split between associates of the Cyperaceae and Juncaceae
Riess, Kai, Schon, Max E., Ziegler, Rebekka, Lutz, Matthias, Shivas, Roger G., Piatek, Marcin and Garnica, Sigisfredo. 2019. "The origin and diversification of the Entorrhizales: deep evolutionary roots but recent speciation with a phylogenetic and phenotypic split between associates of the Cyperaceae and Juncaceae." Organisms Diversity and Evolution. 19 (1), pp. 13-30. https://doi.org/10.1007/s13127-018-0384-4

Article

Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata
Wingfield, Brenda D., Bills, Gerald F., Dong, Yang, Huang, Wenli, Nel, Wilma J., Swalarsk-Parry, Benedicta S., Vaghefi, Niloofar, Wilken, Markus P., An, Zhiqiang, de Beer, Z. Wilhelm, De Vos, Lieschen, Chen, Li, Duong, Tuan A., Gao, Yun, Hammerbacher, Almuth, Kikkert, Julie R., Li, Yan, Li, Huiying, Li, Kuan, ..., Zhang, Xiaoling. 2018. "Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata." IMA Fungus: the global mycological journal. 9 (1), pp. 199-223. https://doi.org/10.5598/imafungus.2018.09.01.13

Article

Cryptic species of Curvularia in the culture collection of the Queensland Plant Pathology Herbarium
Tan, Yu Pei, Crous, Pedro W. and Shivas, Roger G.. 2018. "Cryptic species of Curvularia in the culture collection of the Queensland Plant Pathology Herbarium." MycoKeys. 35, pp. 1-25. https://doi.org/10.3897/mycokeys.35.25665

Article

Diversity of gall-forming rusts (Uromycladium, Pucciniales) on Acacia in Australia
Doungsa-ard, C., McTaggart, A. R., Geering, A. D. W. and Shivas, R. G.. 2018. "Diversity of gall-forming rusts (Uromycladium, Pucciniales) on Acacia in Australia." Persoonia. 40, pp. 221-238. https://doi.org/10.3767/persoonia.2018.40.09

Article

Cryptic diversity, pathogenicity, and evolutionary species boundaries in Cercospora populations associated with Cercospora leaf spot of Beta vulgaris
Vaghefi, Niloofar, Kikkert, Julie R., Hay, Frank S., Carver, Gavriela D., Koenick, Lori B., Bolton, Melvin D., Hanson, Linda E., Secor, Gary A. and Pethybridge, Sarah J.. 2018. "Cryptic diversity, pathogenicity, and evolutionary species boundaries in Cercospora populations associated with Cercospora leaf spot of Beta vulgaris." Fungal Biology. 122 (4), pp. 264-282. https://doi.org/10.1016/j.funbio.2018.01.008

Article

Structural and functional evolution of the TLR genes: a cross-species phylogenetic study and comparison with human oncogenes
Liu, Guang Bin. 2007. "Structural and functional evolution of the TLR genes: a cross-species phylogenetic study and comparison with human oncogenes." 2007 Bioinformatics Australia Conference. Brisbane, Australia 22 - 23 Oct 2007 Brisbane.

Poster

Phylogenetic relationships of graminicolous downy mildews based on cox2 sequence data
Thines, Marco, Goker, Markus, Telle, Sabine, Ryley, Malcolm, Mathur, Kusum, Narayana, Yaladabagi D., Spring, Otmar and Thakur, Ram P.. 2008. "Phylogenetic relationships of graminicolous downy mildews based on cox2 sequence data." Mycological Research. 112 (3), pp. 345-351. https://doi.org/10.1016/j.mycres.2007.10.010

Article