Centre for Crop Health
Latest research outputs
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Integrated disease management tools to manage summer crop diseases in the northern region
Adorada, Dante. 2019. "Integrated disease management tools to manage summer crop diseases in the northern region." 2019 Hermitage Research Facility Staff Research Partnership Visit. Darling Heights, Toowoomba 09 Oct 2019Other
Contrasting effects of commercial and native arbuscular mycorrhizal fungal inoculants on plant biomass allocation, nutrients, and phenolics
Frew, Adam. 2021. "Contrasting effects of commercial and native arbuscular mycorrhizal fungal inoculants on plant biomass allocation, nutrients, and phenolics." Plants, People, Planet. 3 (5), pp. 536-540. https://doi.org/10.1002/ppp3.10128Article
Genome mining of the citrus pathogen Elsinoe fawcettii; prediction and prioritisation of candidate effectors, cell wall degrading enzymes and secondary metabolite gene clusters
Jeffress, Sarah, Arun-Chinnappa, Kiruba, Stodart, Ben, Vaghefi, Niloofar, Tan, Yu Pei and Ash, Gavin. 2020. "Genome mining of the citrus pathogen Elsinoe fawcettii; prediction and prioritisation of candidate effectors, cell wall degrading enzymes and secondary metabolite gene clusters." PLoS One. 15 (5). https://doi.org/10.1371/journal.pone.0227396Article
Resistance of Wheat Genotypes to Root-Lesion Nematode (Pratylenchus thornei) Can be Used to Predict Final Nematode Population Densities, Crop Greenness, and Grain Yield in the Field
Thompson, John P., Sheedy, Jason G. and Robinson, Neil A.. 2020. "Resistance of Wheat Genotypes to Root-Lesion Nematode (Pratylenchus thornei) Can be Used to Predict Final Nematode Population Densities, Crop Greenness, and Grain Yield in the Field." Phytopathology: International Journal of the American Phytopathological Society. 110 (2), pp. 505-516. https://doi.org/10.1094/PHYTO-06-0203-RArticle
A Short-Read Genome Assembly Resource for Leveillula taurica Causing Powdery Mildew Disease of Sweet Pepper (Capsicum annuum)
Kusch, Stefan, Nemeth, Mark Z., Vaghefi, Niloofar, Ibrahim, Heba M.M., Panstruga, Ralph and Kiss, Levente. 2020. "A Short-Read Genome Assembly Resource for Leveillula taurica Causing Powdery Mildew Disease of Sweet Pepper (Capsicum annuum)." Molecular Plant-Microbe Interactions. 33 (6), pp. 782-786. https://doi.org/10.1094/MPMI-02-20-0029-AArticle
Red root rot of Vicia sativa caused by Atractiella rhizophila
Allen, Robert N., Bransgrove, Kaylene and Shivas, Roger G.. 2020. "Red root rot of Vicia sativa caused by Atractiella rhizophila." European Journal of Plant Pathology. 157 (2), pp. 293-297. https://doi.org/10.1007/s10658-020-01985-zArticle
Phytophthora cinnamomi exhibits phenotypic plasticity in response to cold temperatures
Khaliq, Ihsanul, Hardy, Giles E. St. J. and Burgess, Treena I.. 2020. "Phytophthora cinnamomi exhibits phenotypic plasticity in response to cold temperatures." Mycological Progress: international journal of fungal sciences. 19, pp. 405-415. https://doi.org/10.1007/s11557-020-01578-4Article
Commelinaceomyces, gen. nov., for four clavicipitaceous species misplaced in Ustilago that infect Commelinaceae
Tanaka, Eiji, Shrestha, Bhushan and Shivas, Roger G.. 2020. "Commelinaceomyces, gen. nov., for four clavicipitaceous species misplaced in Ustilago that infect Commelinaceae." Mycologia. 112 (3), pp. 649-660. https://doi.org/10.1080/00275514.2020.1745524Article
Phomopsis husk rot of macadamia in Australia and South Africa caused by novel Diaporthe species
Wrona, Christopher J., Mohankumar, Vheena, Schoeman, Maritha H., Tan, Yu P., Shivas, Roger G.S., Jeff-Ego, Olumide S. and Akinsanmi, Olufemi A.. 2020. "Phomopsis husk rot of macadamia in Australia and South Africa caused by novel Diaporthe species." Plant Pathology. 69 (5), pp. 911-921. https://doi.org/10.1111/ppa.13170Article
Phylogeny and pathogenicity of Stemphylium species associated with Fabaceae in Australia
Vaghefi, Niloofar, Thompson, Susan M., Kimber, Rohan B.E., Thomas, Geoff J., Kant, Pragya, Barbetti, Martin J. and van Leur, Joop A.G.. 2020. "Phylogeny and pathogenicity of Stemphylium species associated with Fabaceae in Australia." Mycological Progress: international journal of fungal sciences. 19, pp. 381-396. https://doi.org/10.1007/s11557-020-01566-8Article
Living with the cereal killers of New South Wales: a four-year journey with NSW-DPI Wagga Wagga
Adorada, Dante L.. 2016. "Living with the cereal killers of New South Wales: a four-year journey with NSW-DPI Wagga Wagga." Centre for Crop Health Seminar 2016. Toowoomba, Australia 01 Dec 2016Other
GRDC milestone updates for BACI 2.0
Adorada, Dante. 2019. GRDC milestone updates for BACI 2.0. Unpublished.Project report
Upscaling models, downscaling data or the right model for the right scale of application?
Sparks, Adam H., Garrett, Karen A., Gilligan, Christopher A., Nelson, Andrew and Pembleton, Keith. 2018. "Upscaling models, downscaling data or the right model for the right scale of application?" 11th International Congress of Plant Pathology (ICPP 2018): Plant Health in a Global Economy. Boston, United States 29 Jul - 03 Aug 2018 United States.Keynote
Occurrence and diversity of entomopathogenic fungi (Beauveria spp. and Metarhizium spp.) in Australian vineyard soils
Korosi, Gyongyver A., Wilson, Bree A. L., Powell, Kevin S., Ash, Gavin J., Reineke, Annette and Savocchia, Sandra. 2019. "Occurrence and diversity of entomopathogenic fungi (Beauveria spp. and Metarhizium spp.) in Australian vineyard soils." Journal of Invertebrate Pathology. 164, pp. 69-77. https://doi.org/10.1016/j.jip.2019.05.002Article
Genomic Regions Associated with Virulence in Pyrenophora teres f. teres Identified by Genome-Wide Association Analysis and Bi-parental Mapping
Martin, Anke, Moolhuijzen, Paula, Tao, Yongfu, McIlroy, Judy, Ellwood, Simon, Fowler, Ryan A., Platz, Gregory J., Kilian, Andrzej and Snyman, Lisle. 2020. "Genomic Regions Associated with Virulence in Pyrenophora teres f. teres Identified by Genome-Wide Association Analysis and Bi-parental Mapping." Phytopathology: International Journal of the American Phytopathological Society. 110 (4), pp. 881-891. https://doi.org/10.1094/PHYTO-10-19-0372-RArticle
Exploring natural variation of photosynthesis in a site-specific manner: evolution, progress, and prospects
Dehigaspitiya, Prabuddha, Milham, Paul, Ash, Gavin J., Arun-Chinnappa, Kiruba, Gamage, Dananjali, Martin, Anke, Nagasaka, Seiji and Seneweera, Saman. 2019. "Exploring natural variation of photosynthesis in a site-specific manner: evolution, progress, and prospects." Planta: an international journal of plant biology. 250, pp. 1033-1050. https://doi.org/10.1007/s00425-019-03223-1Article
Fungal planet description sheets: 951–1041
Crous, P. W., Wingfield, M. J., Lombard, L., Roets, F., Swart, W. J., Alvarado, P., Carnegie, A. J., Moreno, G., Luangsa-ard, J., Thangavel, R., Alexandrova, A. V., Baseia, I. G., Bellanger, J. -M., Bessette, A. E., Bessette, A. R., De la Pena-Lastra, S., Garcia, D., Gene, J., Pham, T. H. G., ..., Groenewald, J. Z.. 2019. "Fungal planet description sheets: 951–1041." Persoonia. 43, pp. 223-425. https://doi.org/10.3767/persoonia.2019.43.06Article
Assessment of grain quality in terms of functional group response to elevated [CO2], water, and nitrogen using a meta‐analysis: grain protein, zinc, and iron under future climate
Al‐Hadeethi, Ikhlas, Li, Yan, Odhafa, Abdul Kareem H., Seneweera, Saman and Lam, Shu K.. 2019. "Assessment of grain quality in terms of functional group response to elevated [CO2], water, and nitrogen using a meta‐analysis: grain protein, zinc, and iron under future climate." Ecology and Evolution. 9 (13), pp. 7425-7437. https://doi.org/10.1002/ece3.5210Article
The Parauncinula polyspora Draft Genome Provides Insights into Patterns of Gene Erosion and Genome Expansion in Powdery Mildew Fungi
Frantzeskakis, Lamprinos, Nemeth, Mark Z., Barsoum, Mirna, Kusch, Stefan, Kiss, Levente, Takamatsu, Susumu and Panstruga, Ralph. 2019. "The Parauncinula polyspora Draft Genome Provides Insights into Patterns of Gene Erosion and Genome Expansion in Powdery Mildew Fungi." mBio. 10 (5), pp. 1-17. https://doi.org/10.1128/mBio.01692-19Article
Genetic structure of a Pyrenophora teres f. teres population over time in an Australian barley field as revealed by Diversity Arrays Technology markers
Poudel, B., Vaghefi, N., McLean, M. S., Platz, G. J., Sutherland, M. W. and Martin, Anke. 2019. "Genetic structure of a Pyrenophora teres f. teres population over time in an Australian barley field as revealed by Diversity Arrays Technology markers." Plant Pathology. 68 (7), pp. 1331-1336. https://doi.org/10.1111/ppa.13035Article
Evaluation of the ‘Irish Rules’: The Potato Late Blight Forecasting Model and Its Operational Use in the Republic of Ireland
Cucak, Mladen, Sparks, Adam, de Andrade Moral, Rafael, Kildea, Stephen, Lambkin, Keith and Fealy, Rowan. 2019. "Evaluation of the ‘Irish Rules’: The Potato Late Blight Forecasting Model and Its Operational Use in the Republic of Ireland." Agronomy. 9 (9), pp. 515-539. https://doi.org/10.3390/agronomy9090515Article
hagis, an R Package Resource for Pathotype Analysis of Phytophthora sojae Populations Causing Stem and Root Rot of Soybean
McCoy, Austin G., Noel, Zachary, Sparks, Adam H. and Chilvers, Martin. 2019. "hagis, an R Package Resource for Pathotype Analysis of Phytophthora sojae Populations Causing Stem and Root Rot of Soybean." Molecular Plant-Microbe Interactions. 32 (12), pp. 1574-1576. https://doi.org/10.1094/MPMI-07-19-0180-AArticle
Genera of phytopathogenic fungi: GOPHY 3
Marin-Felix, Y., Hernandez-Restrepo, M., Iturrieta-Gonzalez, I., Garcia, D., Gene, J., Groenewald, J. Z., Cai, L., Chen, Q., Quaedvlieg, W., Schumacher, R. K., Taylor, P. W. J., Ambers, C., Bonthond, G., Edwards, J., Krueger-Hadfield, S. A., Luangsa-ard, J. J., Morton, L., Moslemi, A., Sandoval-Denis, M., ..., Crous, P. W.. 2019. "Genera of phytopathogenic fungi: GOPHY 3." Studies in Mycology. 94, pp. 1-124. https://doi.org/10.1016/j.simyco.2019.05.001Article
Resistance to plant-parasitic nematodes in chickpea: current status and future perspectives
Zwart, Rebecca S., Thudi, Mahendar, Channale, Sonal, Manchikatla, Praveen K., Varshney, Rajeev K. and Thompson, John P.. 2019. "Resistance to plant-parasitic nematodes in chickpea: current status and future perspectives." Frontiers in Plant Science. 10, pp. 1-14. https://doi.org/10.3389/fpls.2019.00966Article
Diversity of Moesziomyces (Ustilaginales, Ustilaginomycotina) on Echinochloa and Leersia (Poaceae)
Li, Ying-Ming, Shivas, Roger G., Li, Bao-Ju and Cai, Lei. 2019. "Diversity of Moesziomyces (Ustilaginales, Ustilaginomycotina) on Echinochloa and Leersia (Poaceae)." MycoKeys. 52, pp. 1-16. https://doi.org/10.3897/mycokeys.52.30461Article
Varietal diversity of Sri Lankan traditional rice based on sensitivity to temperature and photoperiod at vegetative stage
Rathnathunga, Elpitiya Udari Uvindhya, Senanayake, Gamini, Seneweera, Saman and Geekiyanage, Sudarshanee. 2019. "Varietal diversity of Sri Lankan traditional rice based on sensitivity to temperature and photoperiod at vegetative stage." Journal of the National Science Foundation of Sri Lanka. 47 (1), pp. 51-68. https://doi.org/10.4038/jnsfsr.v47i1.8928Article
Fungal planet description sheets: 868–950
Crous, P. W., Carnegie, A. J., Wingfield, M. J., Sharma, R., Mughini, G., Noordeloos, M. E., Santini, A., Shouche, Y. S., Bezerra, J. D. P., Dima, B., Guarnaccia, V., Imrefi, I., Jurjevic, Z., Knapp, D. G., Kovacs, G. M., Magista, D., Perrone, G., Rama, T., Rebriev, Y. A., ..., Groenewald, J. Z.. 2019. "Fungal planet description sheets: 868–950." Persoonia. 42, pp. 291-473. https://doi.org/10.3767/persoonia.2019.42.11Article
Elevated temperature reduces survival of peak populations of root-lesion nematodes (Pratylenchus thornei) after wheat growth in a vertisol
Thompson, J. P., Rostad, H. E., Macdonald, B. J. and Whish, J. P. M.. 2018. "Elevated temperature reduces survival of peak populations of root-lesion nematodes (Pratylenchus thornei) after wheat growth in a vertisol." Biology and Fertility of Soils. 54 (2), pp. 243-257. https://doi.org/10.1007/s00374-017-1256-3Article
Australian cultures of Botryosphaeriaceae held in Queensland and Victoria plant pathology herbaria revisited
Tan, Yu Pei, Shivas, Roger G., Marney, Thomas S., Edwards, Jacqueline, Dearnaley, John, Jami, Fahimeh and Burgess, Treena I.. 2019. "Australian cultures of Botryosphaeriaceae held in Queensland and Victoria plant pathology herbaria revisited." Australasian Plant Pathology. 48 (1), pp. 25-34. https://doi.org/10.1007/s13313-018-0559-7Article
Chronic effects and horizontal transmission of Metarhizium anisopliae strain QS155 infection in the sweet potato weevil, Cylas formicarius (Coleoptera: Brentidae)
Dotaona, Ronnie, Wilson, Bree A. L., Stevens, Mark M., Holloway, Joanne and Ash, Gavin J.. 2017. "Chronic effects and horizontal transmission of Metarhizium anisopliae strain QS155 infection in the sweet potato weevil, Cylas formicarius (Coleoptera: Brentidae)." Biological Control. 114, pp. 24-29. https://doi.org/10.1016/j.biocontrol.2017.07.008Article
Identification of low phytic acid and high Zn bioavailable rice (Oryza sativa L.) from 69 accessions of the world rice core collection
Perera, Ishara, Fukushima, Ayaka, Arai, Mako, Yamada, Kenta, Nagasaka, Seiji, Seneweera, Saman and Hirotsu, Naoki. 2019. "Identification of low phytic acid and high Zn bioavailable rice (Oryza sativa L.) from 69 accessions of the world rice core collection." Journal of Cereal Science. 85, pp. 206-213. https://doi.org/10.1016/j.jcs.2018.12.010Article
Elevated carbon dioxide and nitrogen supply affect photosynthesis and nitrogen partitioning of two wheat varieties
Li, Ping, Hao, Xingyu, Aryal, Mela, Thompson, Michael and Seneweera, Saman. 2019. "Elevated carbon dioxide and nitrogen supply affect photosynthesis and nitrogen partitioning of two wheat varieties." Journal of Plant Nutrition. 42 (11-12), pp. 1290-1300. https://doi.org/10.1080/01904167.2019.1616758Article
One stop shop II: taxonomic update with molecular phylogeny for important phytopathogenic genera: 26–50 (2019)
Jayawardena, Ruvishika S., Hyde, Kevin D., Jeewon, Rajesh, Ghobad-Nejhad, Masoomeh, Wanasinghe, Dhanushka N., Liu, NingGuo, Phillips, Alan J. L., Oliveira-Filho, Jose Ribamar C., da Silva, Gladstone A., Gibertoni, Tatiana B., Abeywikrama, P., Carris, L. M., Chethana, K. W. T., Dissanayake, A. J., Hongsanan, S., Jayasiri, S. C., McTaggart, A. R., Perera, R. H., Phutthacharoen, K., ..., Kang, Ji-Chuan. 2019. "One stop shop II: taxonomic update with molecular phylogeny for important phytopathogenic genera: 26–50 (2019)." Fungal Diversity. 94 (1), pp. 41-129. https://doi.org/10.1007/s13225-019-00418-5Article
Encapsulation of flutriafol fungicide into electrospun biodegredable poly (L-lactide) nanofibers
Javazmi, Leila, Low, Tobias, Ash, Gavin and Young, Anthony. 2018. "Encapsulation of flutriafol fungicide into electrospun biodegredable poly (L-lactide) nanofibers." 2018 Applied Nanotechnology and Nanoscience International Conference (ANNIC 2018). Berlin, Germany 22 - 24 Oct 2018Poster
Phylogeny and taxonomy of Golovinomyces orontii revisited
Braun, U., Shin, H. D., Takamatsu, S., Meeboon, J., Kiss, L., Lebeda, A., Kitner, M. and Gotz, M.. 2019. "Phylogeny and taxonomy of Golovinomyces orontii revisited." Mycological Progress: international journal of fungal sciences. 18 (3), pp. 335-357. https://doi.org/10.1007/s11557-018-1453-yArticle
Diaporthe novem isolated from sunflower (Helianthus annuus) and other crop and weed hosts in Australia
Thompson, S. M., Tan, Y. P., Neate, S. M., Grams, R. M., Shivas, R. G., Lindbeck, K. and Aitken, E. A. B.. 2018. "Diaporthe novem isolated from sunflower (Helianthus annuus) and other crop and weed hosts in Australia." European Journal of Plant Pathology. 152 (3), pp. 823-831. https://doi.org/10.1007/s10658-018-1515-7Article
Investigating hybridisation between the forms of Pyrenophora teres based on Australian barley field experiments and cultural collections
Poudel, B., McLean, M. S., Platz, G. J., McIlroy, J. A., Sutherland, M. W. and Martin, A.. 2019. "Investigating hybridisation between the forms of Pyrenophora teres based on Australian barley field experiments and cultural collections." European Journal of Plant Pathology. 153 (2), pp. 465-473. https://doi.org/10.1007/s10658-018-1574-9Article
Green fluorescent protein transformation sheds more light on a widespread mycoparasitic interaction
Nemeth, Mark Z., Pintye, Alexandra, Horvath, Aron N., Vagi, Pal, Kovacs, Gabor M., Gorfer, Markus and Kiss, Levente. 2019. "Green fluorescent protein transformation sheds more light on a widespread mycoparasitic interaction." Phytopathology: International Journal of the American Phytopathological Society. 109 (8), pp. 1404-1416. https://doi.org/10.1094/PHYTO-01-19-0013-RArticle
Effect of elevated carbon dioxide on plant biomass and grain protein concentration differs across bread, durum and synthetic hexaploid wheat genotypes
Thompson, Michael, Gamage, Dananjali, Ratnasekera, Disna, Perera, Anton, Martin, Anke and Seneweera, Saman. 2019. "Effect of elevated carbon dioxide on plant biomass and grain protein concentration differs across bread, durum and synthetic hexaploid wheat genotypes." Journal of Cereal Science. 87, pp. 103-110. https://doi.org/10.1016/j.jcs.2019.03.007Article
Impacts of rice diseases in tropical Asia
Castilla, Nancy P., Macasero, John Bethany, Villa, Joselito, Sparks, Adam H., Willocquet, Laetitia and Savary, Serge. 2018. "Impacts of rice diseases in tropical Asia." 11th International Congress of Plant Pathology (ICPP 2018): Plant Health in a Global Economy. Boston, United States 29 Jul - 03 Aug 2018 United States.Presentation
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