31. Biological Sciences


Title31. Biological Sciences
ParentANZSRC Field of Research

Latest research outputs

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Draft genome sequences of Chrysoporthe austroafricana, Diplodia scrobiculata, Fusarium nygamai, Leptographium lundbergii, Limonomyces culmigenus, Stagonosporopsis tanaceti, and Thielaviopsis punctulata
Wingfield, Brenda D., Ades, Peter K., Al-Naemi, Fatima A., Beirn, Lisa A., Bihon, Wubetu, Crouch, Jo Anne, de Beer, Z. Wilhelm, De Vos, Lieschen, Duong, Tuan A., Fields, Christopher J., Fourie, Gerda, Kanzi, Aquillah M., Malapi-Wight, Martha, Pethybridge, Sarah J., Radwan, Osman, Rendon, Gloria, Slippers, Bernard, Santana, Quentin C., Steenkamp, Emma T., ..., Wingfield, Michael J.. 2015. "Draft genome sequences of Chrysoporthe austroafricana, Diplodia scrobiculata, Fusarium nygamai, Leptographium lundbergii, Limonomyces culmigenus, Stagonosporopsis tanaceti, and Thielaviopsis punctulata." IMA Fungus: the global mycological journal. 6 (1), pp. 233-248. https://doi.org/10.5598/imafungus.2015.06.01.15

Article

Rapid changes in the genetic composition of Stagonosporopsis tanaceti population in Australian pyrethrum fields
Vaghefi, Niloofar, Hay, Frank S., Ades, Peter K., Pethybridge, Sarah Jane, Ford, Rebecca and Taylor, Paul W. J.. 2015. "Rapid changes in the genetic composition of Stagonosporopsis tanaceti population in Australian pyrethrum fields." Phytopathology: International Journal of the American Phytopathological Society. 105 (3), pp. 358-369. https://doi.org/10.1094/PHYTO-08-14-0212-R

Article

Curvularia tsudae comb. nov. et nom. nov., formerly Pseudocochliobolus australiensis, and a revised synonymy for Curvularia australiensis
Deng, Hui, Tan, Yu Pei, Shivas, Roger G. and Niu, Yong Chun. 2015. "Curvularia tsudae comb. nov. et nom. nov., formerly Pseudocochliobolus australiensis, and a revised synonymy for Curvularia australiensis." Mycoscience. 56 (1), pp. 24-28. https://doi.org/10.1016/j.myc.2014.02.002

Article

Johnalcornia gen. et. comb. nov., and nine new combinations in Curvularia based on molecular phylogenetic analysis
Tan, Yu Pei, Madrid, Hugo, Crous, Pedro W. and Shivas, Roger G.. 2014. "Johnalcornia gen. et. comb. nov., and nine new combinations in Curvularia based on molecular phylogenetic analysis." Australasian Plant Pathology. 43 (6), pp. 589-603. https://doi.org/10.1007/s13313-014-0315-6

Article

Ravenelia acaciae-arabicae and Ravenelia evansii are distinct species on Acacia nilotica subsp. indica in India
Shivas, R. G., Balu, A., Singh, S., Ahmed, S. I. and Dhileepan, K.. 2013. "Ravenelia acaciae-arabicae and Ravenelia evansii are distinct species on Acacia nilotica subsp. indica in India." Australasian Mycologist. 31, pp. 31-37.

Article

The Amsterdam Declaration on Fungal Nomenclature
Hawksworth, David L., Crous, Pedro W., Redhead, Scott A., Reynolds, Don R., Samson, Robert A., Seifert, Keith A., Taylor, John W., Wingfield, Michael J., Abaci, Ozlem, Aime, Catherine, Asan, Ahmet, Bai, Feng-Yan, de Beer, Z. Wilhelm, Begerow, Dominik, Berikten, Derya, Boekhout, Teun, Buchanan, Peter K., Burgess, Treena, Buzina, Walter, ..., Zhang, Ning. 2011. "The Amsterdam Declaration on Fungal Nomenclature." IMA Fungus: the global mycological journal. 2 (1), pp. 105-112. https://doi.org/10.5598/imafungus.2011.02.01.14

Article

Survey of Botryosphaeriaceae associated with grapevine decline in the Hunter Valley and Mudgee grape growing regions of New South Wales
Qiu, Y., Steel, C. C., Ash, G. J. and Savocchia, S.. 2011. "Survey of Botryosphaeriaceae associated with grapevine decline in the Hunter Valley and Mudgee grape growing regions of New South Wales." Australasian Plant Pathology. 40 (1), pp. 1-11. https://doi.org/10.1007/s13313-010-0007-9

Article

The first genetic map of pigeon pea based on diversity arrays technology (DArT) markers
Yang, Shi Ying, Saxena, Rachit K., Kulwal, Pawan L., Ash, Gavin J., Dubey, Anuja, Harper, John D. I., Upadhyaya, Hari D., Gothalwal, Ragini, Kilian, Andrzej and Varshney, Rajeev K.. 2011. "The first genetic map of pigeon pea based on diversity arrays technology (DArT) markers." Journal of Genetics. 90 (1), pp. 103-109. https://doi.org/10.1007/s12041-011-0050-5

Article

Black scab of jojoba (simmondsia chinensis) in Australia caused by a putative new pathotype of elsinoë Australis
Ash, G. J., Stodart, B. and Hyun, J. W.. 2012. "Black scab of jojoba (simmondsia chinensis) in Australia caused by a putative new pathotype of elsinoë Australis." Plant Disease: an international journal of applied plant pathology. 96 (5), pp. 629-634. https://doi.org/10.1094/PDIS-06-11-0465

Article

Evaluation of resistance to Phomopsis stem blight (caused by Diaporthe toxica) in Lupinus albus
Cowley, Raymond B., Ash, Gavin J., Harper, John D. I. and Luckett, David J.. 2012. "Evaluation of resistance to Phomopsis stem blight (caused by Diaporthe toxica) in Lupinus albus." European Journal of Plant Pathology. 133 (3), pp. 631-644. https://doi.org/10.1007/s10658-012-9942-3

Article

Development of a reliable and rapid detached leaf assay to detect resistance to the fungal disease phomopsis leaf blight, caused by Diaporthe toxica, in Lupinus albus
Cowley, Raymond B., Luckett, David J., Harper, John D. I. and Ash, Gavin J.. 2012. "Development of a reliable and rapid detached leaf assay to detect resistance to the fungal disease phomopsis leaf blight, caused by Diaporthe toxica, in Lupinus albus." Canadian Journal of Plant Pathology. 34 (3), pp. 401-409. https://doi.org/10.1080/07060661.2012.705327

Article

Application of multi-phase experiments in plant pathology to identify genetic resistance to Diaporthe toxica in Lupinus albus
Cowley, R. B., Ash, G. J., Harper, J. D I, Smith, A. B., Cullis, B. R. and Luckett, D. J.. 2012. "Application of multi-phase experiments in plant pathology to identify genetic resistance to Diaporthe toxica in Lupinus albus." Euphytica: international journal on plant breeding. 186 (3), pp. 655-669. https://doi.org/10.1007/s10681-011-0529-4

Article

No indication of strict host associations in a widespread mycoparasite: Grapevine Powdery Mildew (Erysiphe necator) is attacked by phylogenetically distant Ampelomyces strains in the field
Pintye, Alexandra, Bereczky, Zsolt, Kovacs, Gabor M., Nagy, Laszlo G., Xu, Xiangming, Legler, Sara Elisabetta, Vaczy, Zsuzsanna, Vaczy, Kalman Zoltan, Caffi, Tito, Rossi, Vittorio and Kiss, Levente. 2012. "No indication of strict host associations in a widespread mycoparasite: Grapevine Powdery Mildew (Erysiphe necator) is attacked by phylogenetically distant Ampelomyces strains in the field." Phytopathology: International Journal of the American Phytopathological Society. 102 (7), pp. 707-716. https://doi.org/10.1094/PHYTO-10-11-0270

Article

Detection and quantification of Leveillula taurica growth in pepper leaves
Zheng, Zheng, Nonomura, Teruo, Boka, Karoly, Matsuda, Yoshinori, Visser, Richard G. F., Toyoda, Hideyoshi, Kiss, Levente and Bai, Yuling. 2013. "Detection and quantification of Leveillula taurica growth in pepper leaves." Phytopathology: International Journal of the American Phytopathological Society. 103 (6), pp. 623-632. https://doi.org/10.1094/PHYTO-08-12-0198-R

Article

New insights into the life cycle of the wheat powdery mildew: direct observation of ascosporic infection in Blumeria graminis f. sp. tritici
Jankovics, Tünde, Komaromi, Judit, Fabian, Attila, Jager, Katalin, Vida, Gyula and Kiss, Levente. 2015. "New insights into the life cycle of the wheat powdery mildew: direct observation of ascosporic infection in Blumeria graminis f. sp. tritici." Phytopathology: International Journal of the American Phytopathological Society. 105 (6), pp. 797-804. https://doi.org/10.1094/PHYTO-10-14-0268-R

Article

Fungal planet description sheets: 69-91
Crous, P. W., Groenewald, J. Z., Shivas, R. G., Edwards, J., Seifert, K. A., Alfenas, A. C., Alfenas, R. F., Burgess, T. I., Carnegie, A. J., Hardy, G. E. St J., Quaedvlieg, W., Young, A. J., McTaggart, A. R., Pascoe, I. G., Porter, I. J., Louis-Seize, G., Pereira, O. L., Hüberli, D., Jung, T., ..., White, G. P.. 2011. "Fungal planet description sheets: 69-91." Persoonia. 26, pp. 108-156. https://doi.org/10.3767/003158511X581723

Article

Endophytic and pathogenic Phyllosticta species, with reference to those associated with Citrus Black spot
Glienke, C., Pereira, O. L., Stringari, D., Fabris, J., Kava-Cordeiro, V., Galli-Terasawa, L., Cunnington, J., Shivas, R. G., Groenewald, J. Z. and Crous, P. W.. 2011. "Endophytic and pathogenic Phyllosticta species, with reference to those associated with Citrus Black spot." Persoonia. 26, pp. 47-56. https://doi.org/10.3767/003158511X569169

Article

Fungal planet description sheets: 107-127
Crous, P. W., Summerell, B. A., Shivas, R. G., Burgess, T. I., Lombard, L., Groenewald, J. Z., Liew, E. C Y, McTaggart, A. R., Hardy, G. E S J, Huberli, D., De cock, C. A., Dreyer, L. L., Granke, L. L., Hausbeck, M. K., Guest, D. I., Shuttleworth, L. A., Jung, T., Koukol, O., Lennox, C. L., ..., Windstam, S. T.. 2012. "Fungal planet description sheets: 107-127." Persoonia. 28, pp. 138-182. https://doi.org/10.3767/003158512X652633

Article

Fungal planet description sheets: 320–370
Crous, P. W., Wingfield, M. J., Guarro, J., Hernandez-Restrep, M., Sutton, D. A., Acharya, K., Barber, P. A., Boekhout, T., Dimitrov, R. A., Duenas, M., Dutta, A. K., Gene, J., Gouliamova, D. E., Groenewald, M., Lombard, L., Morozova, O. V., Sarkar, J., Smith, M. Th., Stchigel, A. M., ..., Groenewald, J. Z.. 2015. "Fungal planet description sheets: 320–370." Persoonia. 34, pp. 167-266. https://doi.org/10.3767/003158515X688433

Article

Novel species of Cercospora and Pseudocercospora (Capnodiales, Mycosphaerellaceae) from Australia
Shivas, Roger Graham, Marney, Thomas Stephen, Tan, Yu Pei and McTaggart, Alistair Ross. 2015. "Novel species of Cercospora and Pseudocercospora (Capnodiales, Mycosphaerellaceae) from Australia." Fungal Biology. 119 (5), pp. 362-369. https://doi.org/10.1016/j.funbio.2014.09.004

Article

Wongia gen. nov. (Papulosaceae, Sordariomycetes), a new generic name for two root-infecting fungi from Australia
Khemmuk, Wanporn, Geering, Andrew D. W. and Shivas, Roger G.. 2016. "Wongia gen. nov. (Papulosaceae, Sordariomycetes), a new generic name for two root-infecting fungi from Australia." IMA Fungus: the global mycological journal. 7 (2), pp. 247-252. https://doi.org/10.5598/imafungus.2016.07.02.04

Article

A phylogenetic and taxonomic re-evaluation of the Bipolaris - Cochliobolus - Curvularia Complex
Manamgoda, Dimuthu S., Cai, Lei, McKenzie, Eric H. C., Crous, Pedro W., Madrid, Hugo, Chukeatirote, Ekachai, Shivas, Roger G., Tan, Yu Pei and Hyde, Kevin D.. 2012. "A phylogenetic and taxonomic re-evaluation of the Bipolaris - Cochliobolus - Curvularia Complex." Fungal Diversity. 56 (1), pp. 131-144. https://doi.org/10.1007/s13225-012-0189-2

Article

Molecular phylogenetic analysis reveals six new species of Diaporthe from Australia
Tan, Y. P., Edwards, J., Grice, K. R E and Shivas, R. G.. 2013. "Molecular phylogenetic analysis reveals six new species of Diaporthe from Australia." Fungal Diversity. 61 (1), pp. 251-260. https://doi.org/10.1007/s13225-013-0242-9

Article

Online identification guides for Australian smut fungi (Ustilaginomycotina) and rust fungi (Pucciniales)
Shivas, Roger G., Beasley, Dean R. and McTaggart, Alistair R.. 2014. "Online identification guides for Australian smut fungi (Ustilaginomycotina) and rust fungi (Pucciniales)." IMA Fungus: the global mycological journal. 5 (2), pp. 195-202. https://doi.org/10.5598/imafungus.2014.05.02.03

Article

Baobabopsis, a new genus of graminicolous downy mildews from tropical Australia, with an updated key to the genera of downy mildews
Thines, Marco, Telle, Sabine, Choi, Young Joon, Tan, Yu Pei and Shivas, Roger G.. 2015. "Baobabopsis, a new genus of graminicolous downy mildews from tropical Australia, with an updated key to the genera of downy mildews." IMA Fungus: the global mycological journal. 6 (2), pp. 483-491. https://doi.org/10.5598/imafungus.2015.06.02.12

Article

Novel Pathotypes of Elsinoë australis Associated with Citrus australasica and Simmondsia chinensis in Australia
Miles, Andrew K., Tan, Yu Pei, Shivas, Roger G. and Drenth, André. 2015. "Novel Pathotypes of Elsinoë australis Associated with Citrus australasica and Simmondsia chinensis in Australia." Tropical Plant Pathology. 40 (1), pp. 26-34. https://doi.org/10.1007/s40858-015-0005-0

Article

Mycosarcoma (Ustilaginaceae), a resurrected generic name for corn smut (Ustilago maydis) and its close relatives with hypertrophied, tubular sori
McTaggart, Alistair R., Shivas, Roger G., Boekhout, Teun, Oberwinkler, Franz, Vanky, Kalman, Pennycook, Shaun R. and Begerow, Dominik. 2016. "Mycosarcoma (Ustilaginaceae), a resurrected generic name for corn smut (Ustilago maydis) and its close relatives with hypertrophied, tubular sori." IMA Fungus: the global mycological journal. 7 (2), pp. 309-315. https://doi.org/10.5598/imafungus.2016.07.02.10

Article

Eight novel Bipolaris species identified from John L. Alcorn’s collections at the Queensland Plant Pathology Herbarium (BRIP)
Tan, Yu Pei, Shivas, Roger G. and Crous, Pedro W.. 2016. "Eight novel Bipolaris species identified from John L. Alcorn’s collections at the Queensland Plant Pathology Herbarium (BRIP)." Mycological Progress: international journal of fungal sciences. 15 (10-11), pp. 1203-1214. https://doi.org/10.1007/s11557-016-1240-6

Article

Phyllosticta species on orchids (Orchidaceae), introducing Phyllosticta speewahensis sp. nov. (Phyllostictaceae, Ascomycota) from northern Australia
Shivas, Roger Graham, Tan, Yu Pei and Grice, Kathy R. E.. 2013. "Phyllosticta species on orchids (Orchidaceae), introducing Phyllosticta speewahensis sp. nov. (Phyllostictaceae, Ascomycota) from northern Australia." Sydowia: an international journal of mycology. 65 (1), pp. 139-146.

Article

The variable region of the pneumococcal pathogenicity island 1 is responsible for the unusually high virulence of a serotype 1 isolate
Harvey, Richard M., Trappetti, Claudia, Mahdi, Layla K., Wang, Hui, McAllister, Lauren J., Scalvini, Alexandra, Paton, Adrienne W. and Paton, James C.. 2016. "The variable region of the pneumococcal pathogenicity island 1 is responsible for the unusually high virulence of a serotype 1 isolate." Infection and Immunity. 84 (3), pp. 822-832. https://doi.org/10.1128/IAI.01454-15

Article

A functional genomics catalogue of activated transcription factors during pathogenesis of pneumococcal disease
Mahdi, Layla K., Deihim, Tahereh, Zamansani, Fatemeh, Fruzangohar, Mario, Adelson, David L., Paton, James C., Ogunniyi, Abiodun D. and Ebrahimie, Esmaeil. 2014. "A functional genomics catalogue of activated transcription factors during pathogenesis of pneumococcal disease." BMC Genomics. 15 (1), pp. 1-15. https://doi.org/10.1186/1471-2164-15-769

Article

Groundwater decline and climatic variability: Implications for groundwater linked agro-ecosystems
Le Brocque, Andrew F., Kath, Jarrod, Reardon-Smith, Kate and Apan, Armando. 2016. "Groundwater decline and climatic variability: Implications for groundwater linked agro-ecosystems." 2016 Conference of the Ecological Society of Australia (ESA 2016). Fremantle, Australia 29 Nov - 02 Dec 2016 Australia.

Poster

Dry flower disease of Macadamia in Australia caused by Neopestalotiopsis macadamiae sp. nov. and Pestalotiopsis macadamiae sp. nov
Akinsanmi, Olufemi A., Nisa, Shaheen, Jeff-Ego, Olumdie S., Shivas, Roger G. and Drenth, Andre. 2017. "Dry flower disease of Macadamia in Australia caused by Neopestalotiopsis macadamiae sp. nov. and Pestalotiopsis macadamiae sp. nov." Plant Disease: an international journal of applied plant pathology. 101 (1), pp. 45-53. https://doi.org/10.1094/PDIS-05-16-0630-RE

Article

Genome sequences of Pseudomonas spp. isolated from cereal crops
Gardiner, Donald M., Stiller, Jiri, Covarelli, Lorenzo, Lindeberg, Magdalen, Shivas, Roger G. and Manners, John M.. 2013. "Genome sequences of Pseudomonas spp. isolated from cereal crops." Genome Announcements. 1 (3), pp. 1-2. https://doi.org/10.1128/genomeA.00209-13

Article

Functional hemispheric asynchrony: an optical imaging study
Liu, Guang Bin and Pettigrew, John. 2002. "Functional hemispheric asynchrony: an optical imaging study." 22nd Annual Meeting of the Australian Neuroscience Society (ANS 2002). Sydney, Australia Mar 2002 Sydney.

Poster

Structural and functional evolution of the TLR genes: a cross-species phylogenetic study and comparison with human oncogenes
Liu, Guang Bin. 2007. "Structural and functional evolution of the TLR genes: a cross-species phylogenetic study and comparison with human oncogenes." 2007 Bioinformatics Australia Conference. Brisbane, Australia 22 - 23 Oct 2007 Brisbane.

Poster

Comparison of epigenetic changes that have predisposed protein kinase genes to become oncogenes
Liu, Guang Bin, Pioth, Gabriel and Zheng, Qing Yin. 2009. "Comparison of epigenetic changes that have predisposed protein kinase genes to become oncogenes." Case Comprehensive Cancer Center Breast Cancer Retreat 2009. Cleveland, United States 05 - 06 Oct 2009 Cleveland, Ohio, United States.

Poster

Development of auditory function in the tammar wallaby Macropus eugenii
Hill, Kenneth G., Cone-Wesson, Barbara and Liu, Guang-Bin. 1998. "Development of auditory function in the tammar wallaby Macropus eugenii." Hearing Research. 117 (1-2), pp. 97-106. https://doi.org/10.1016/S0378-5955(97)00211-6

Article

Global genotype flow in Cercospora beticola populations confirmed through genotyping-by-sequencing
Vaghefi, Niloofar, Kikkert, Julie R., Bolton, Melvin D., Hanson, Linda E., Secor, Gary A., Nelson, Scot C. and Pethybridge, Sarah J.. 2017. "Global genotype flow in Cercospora beticola populations confirmed through genotyping-by-sequencing." PLoS One. 12 (10). https://doi.org/10.1371/journal.pone.0186488

Article

Abscisic acid activates pathogenesis-related defense gene signaling in lentils
Ford, Rebecca, Tan, David, Vaghefi, Niloofar and Mustafa, Barkat. 2017. "Abscisic acid activates pathogenesis-related defense gene signaling in lentils." Pandey, Girdhar K. (ed.) Mechanism of plant hormone signaling under stress. United States. John Wiley & Sons. pp. 243-270

Edited book (chapter)