3105. Genetics


Title3105. Genetics
Parent31. Biological Sciences

Latest research outputs

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Respiratory eukaryotic virome expansion and bacteriophage deficiency characterize childhood asthma
Megremis, Spyridon, Constantinides, Bede, Xepapadaki, Paraskevi, Yap, Chuan Fu, Sotiropoulos, Alexandros G., Bachert, Claus, Finotto, Susetta, Jartti, Tuomas, Tapinos, Avraam, Vuorinen, Tytti, Andreakos, Evangelos, Robertson, David L. and Papadopoulos, Nikolaos G.. 2023. "Respiratory eukaryotic virome expansion and bacteriophage deficiency characterize childhood asthma." Scientific Reports. 13 (1). https://doi.org/10.1038/s41598-023-34730-7

Article

A survey of lineage‐specific genes in Triticeae reveals de novo gene evolution from genomic raw material
Poretti, Manuel, Praz, Coraline R, Sotiropoulos, Alexandros G. and Wicker, Thomas. 2023. "A survey of lineage‐specific genes in Triticeae reveals de novo gene evolution from genomic raw material." Plant Direct. 7 (3), p. e484. https://doi.org/10.1002/pld3.484

Article

The broad use of the Pm8 resistance gene in wheat resulted in hypermutation of the AvrPm8 gene in the powdery mildew pathogen
Kunz, Lukas, Sotiropoulos, Alexandros G., Graf, Johannes, Razavi, Mohammad, Keller, Beat and Müller, Marion C.. 2023. "The broad use of the Pm8 resistance gene in wheat resulted in hypermutation of the AvrPm8 gene in the powdery mildew pathogen." BMC Biology. 21 (1), p. 29. https://doi.org/10.1186/s12915-023-01513-5

Article

Mutagenesis of wheat powdery mildew reveals a single gene controlling both NLR and tandem kinase-mediated immunity
Bernasconi, Zoe, Stirnemann, Ursin, Heuberger, Matthias, Sotiropoulos, Alexandros, Graf, Johannes, Wicker, Thomas, Keller, Beat and Sánchez-Martín, Javier. 2023. "Mutagenesis of wheat powdery mildew reveals a single gene controlling both NLR and tandem kinase-mediated immunity." Molecular Plant-Microbe Interactions. https://doi.org/10.1094/MPMI-09-23-0136-FI

Article

The Good, the Bad, and the Misleading: How to Improve the Quality of 'Genome Announcements'?
Kusch, Stefan, Vaghefi, Niloofar and Kiss, Levente. 2023. "The Good, the Bad, and the Misleading: How to Improve the Quality of 'Genome Announcements'?" Molecular Plant-Microbe Interactions. 36 (7), pp. 393-396. https://doi.org/10.1094/MPMI-01-23-0009-LE

Letter

Zinc biofortification of rice using carbon nanodots
Wijerathna, Peella Kankanamage Chamika Buddhinie. 2023. Zinc biofortification of rice using carbon nanodots. PhD Thesis Doctor of Philosophy. University of Southern Queensland. https://doi.org/10.26192/yzww3

PhD Thesis

Canonical and extra-telomeric functions of telomerase: Implications for healthy ageing conferred by endurance training
Denham, Josh. 2023. "Canonical and extra-telomeric functions of telomerase: Implications for healthy ageing conferred by endurance training." Aging Cell. 22 (6). https://doi.org/10.1111/acel.13836

Article

The influence of goat genotype on the production of Capretto and Chevon carcasses. 1. Growth and carcass characteristics
Dhanda, J. S., Taylor, D. G., McCosker, J. E. and Murray, P. J.. 1999. "The influence of goat genotype on the production of Capretto and Chevon carcasses. 1. Growth and carcass characteristics." Meat Science. 52 (4), pp. 355-361. https://doi.org/10.1016/S0309-1740(99)00016-9

Article

Meat quality of first and second cross capretto goat carcasses
Husain, M. H., Murray, P. J. and Taylor, D. G.. 2000. "Meat quality of first and second cross capretto goat carcasses." Asian-Australasian Journal of Animal Sciences. 13 (Supp. 1), pp. 174-177.

Article

Part 2. Carcass composition and fatty acid profiles of adipose tissue of male goats: effects of genotype and liveweight at slaughter
Dhanda, J. S., Taylor, D. G. and Murray, P. J.. 2003. "Part 2. Carcass composition and fatty acid profiles of adipose tissue of male goats: effects of genotype and liveweight at slaughter." Small Ruminant Research. 50 (1-2), pp. 67-74. https://doi.org/10.1016/S0921-4488(03)00113-5

Article

Exercise regulates shelterin genes and microRNAs implicated in ageing in Thoroughbred horses
Mandal, Shama, Denham, Michele M., Spencer, Sarah J. and Denham, Joshua. 2022. "Exercise regulates shelterin genes and microRNAs implicated in ageing in Thoroughbred horses." Pfugers Archiv: European journal of physiology. 474 (11), p. 1159–1169. https://doi.org/10.1007/s00424-022-02745-0

Article

Meta-Data Analysis to Explore the Hub of the Hub-Genes That Influence SARS-CoV-2 Infections Highlighting Their Pathogenetic Processes and Drugs Repurposing
Mosharaf, Md. Parvez, Kibria, Md. Kaderi, Hossen, Md. Bayazid, Islam, Md. Ariful, Reza, Md. Selim, Mahumud, Rashidul Alam, Alam, Khorshed, Gow, Jeffrey and Mollah, Md. Nurul Haque. 2022. "Meta-Data Analysis to Explore the Hub of the Hub-Genes That Influence SARS-CoV-2 Infections Highlighting Their Pathogenetic Processes and Drugs Repurposing." Vaccines. 10 (8), pp. 1-22. https://doi.org/10.3390/vaccines10081248

Article

Whole-Genome Data from Curtobacterium flaccumfaciens pv. flaccumfaciens Strains Associated with Tan Spot of Mungbean and Soybean Reveal Diverse Plasmid Profiles
Vaghefi, Niloofar, Adorada, Dante L., Huth, Lauren, Kelly, Lisa A., Poudel, Barsha, Young, Anthony and Sparks, Adam H.. 2021. "Whole-Genome Data from Curtobacterium flaccumfaciens pv. flaccumfaciens Strains Associated with Tan Spot of Mungbean and Soybean Reveal Diverse Plasmid Profiles." Molecular Plant-Microbe Interactions. 34 (10), pp. 1216-1222. https://doi.org/10.1094/MPMI-05-21-0116-A

Article

A QTL on the Ca7 chromosome of chickpea affects resistance to the root‑lesion nematode Pratylenchus thornei
Khoo, Kelvin H. P., Sheedy, Jason G., Taylor, Julian D., Croser, Janine S., Hayes, Julie E., Sutton, Tim, Thompson, John P. and Mather, Diane E.. 2021. "A QTL on the Ca7 chromosome of chickpea affects resistance to the root‑lesion nematode Pratylenchus thornei." Molecular Breeding: new strategies in plant improvement. 41 (12), pp. 1-13. https://doi.org/10.1007/s11032-021-01271-8

Article

Transposable element populations shed light on the evolutionary history of wheat and the complex co‐evolution of autonomous and non‐autonomous retrotransposons
Wicker, Thomas, Stritt, Christoph, Sotiropoulos, Alexandros G, Poretti, Manuel, Pozniak, Curtis, Walkowiak, Sean, Gundlach, Heidrun and Stein, Nils. 2022. "Transposable element populations shed light on the evolutionary history of wheat and the complex co‐evolution of autonomous and non‐autonomous retrotransposons." Advanced Genetics. 3 (1). https://doi.org/10.1002/ggn2.202100022

Article

A fictional field case study to understand the genetic basis of host-fungal pathogen interactions using the wheat powdery mildew-wheat pathosystem
Sotiropoulos, Alexandros G., Sánchez-Martín, Javier, Widrig, Victoria, Isaksson, Jonatan, Bernasconi, Zoe, Koller, Teresa, Bearth, Giulia, Herren, Gerhard, Wicker, Thomas and Keller, Beat. 2022. "A fictional field case study to understand the genetic basis of host-fungal pathogen interactions using the wheat powdery mildew-wheat pathosystem." Journal of Biological Education. https://doi.org/10.1080/00219266.2022.2147574

Article

Ancient variation of the AvrPm17 gene in powdery mildew limits the effectiveness of the introgressed rye Pm17 resistance gene in wheat
Müller, Marion C., Kunz, Lukas, Schudel, Seraina, Lawson, Aaron W., Kammerecker, Sandrine, Isaksson, Jonatan, Wyler, Michele, Graf, Johannes, Sotiropoulos, Alexandro G.s, Praz, Coraline R., Manser, Beatrice, Wicker, Thomas, Bourras, Salim and Keller, Beat. 2022. "Ancient variation of the AvrPm17 gene in powdery mildew limits the effectiveness of the introgressed rye Pm17 resistance gene in wheat." Proceedings of the National Academy of Sciences (PNAS). 119 (30). https://doi.org/10.1073/pnas.2108808119

Article

A global analysis of matches and mismatches between human genetic and linguistic histories
Barbieri, Chiara, Blasi, Damian E., Arango-Isaza, Epifania, Sotiropoulos, Alexandros G., Hammarstrom, Harald, Wichmann, Soren, Greenhill, Simon J., Gray, Russell D., Forkel, Robert, Bickel, Balthasar and Shimizu, Kentaro K.. 2022. "A global analysis of matches and mismatches between human genetic and linguistic histories." Proceedings of the National Academy of Sciences (PNAS). 119 (47), p. e2122084119. https://doi.org/10.1073/pnas.2122084119

Article

Prediction of Fly-rock using Gene Expression Programming and Teaching– learning-based Optimization Algorithm
Shamsi, R., Amin, Mohammad Saeed, Dehghani, Hesam, Bascompta, Marc, Jodeiri Shokri, Behshad and Entezam, Shima. 2022. "Prediction of Fly-rock using Gene Expression Programming and Teaching– learning-based Optimization Algorithm." Journal of Mining and Environment. 13 (2), pp. 391-406. https://doi.org/10.22044/jme.2022.11825.2171

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Determination of ozone concentration using gene expression programming algorithm (GEP)- Zrenjanin, Serbia
Dehghani, Hesam, Velicković, Milica, Jodeiri Shokri, Behshad, Mihajlovic, Ivan, Nikolic, Djordje and Panic, Marija. 2022. "Determination of ozone concentration using gene expression programming algorithm (GEP)- Zrenjanin, Serbia." International Journal of Mining and Geo-Engineering. 56 (1), pp. 1-9. https://doi.org/10.22059/IJMGE.2021.313278.594874

Article

Telomere Length Maintenance and Cardio-Metabolic Disease Prevention Through Exercise Training
Denham, Joshua, O'Brien, Brendan J. and Charchar, Fadi J.. 2016. "Telomere Length Maintenance and Cardio-Metabolic Disease Prevention Through Exercise Training." Sports Medicine. 46 (9), pp. 1213-1237. https://doi.org/10.1007/s40279-016-0482-4

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Muscle-Enriched MicroRNAs Isolated from Whole Blood Are Regulated by Exercise and Are Potential Biomarkers of Cardiorespiratory Fitness
Denham, Joshua and Prestes, Priscilla R.. 2016. "Muscle-Enriched MicroRNAs Isolated from Whole Blood Are Regulated by Exercise and Are Potential Biomarkers of Cardiorespiratory Fitness." Frontiers in Genetics. 7, pp. 1-8. https://doi.org/10.3389/fgene.2016.00196

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Epigenetic changes in leukocytes after 8 weeks of resistance exercise training
Denham, Joshua, Marques, Francine Z., Bruns, Emma L., O'Brien, Brendan J. and Charchar, Fadi J.. 2016. "Epigenetic changes in leukocytes after 8 weeks of resistance exercise training." European Journal of Applied Physiology. 116 (6), pp. 1245-1253. https://doi.org/10.1007/s00421-016-3382-2

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Increased expression of telomere-regulating genes in endurance athletes with long leukocyte telomeres
Denham, Joshua, O'Brien, Brendan J., Prestes, Priscilla R., Brown, Nicholas J. and Charchar, Fadi J.. 2016. "Increased expression of telomere-regulating genes in endurance athletes with long leukocyte telomeres." Journal of Applied Physiology. 120 (2), pp. 148-158. https://doi.org/10.1152/japplphysiol.00587.2015

Article

Lack of association between PBMC telomere length and endurance exercise
Denham, Joshua. 2017. "Lack of association between PBMC telomere length and endurance exercise." Journal of Applied Biomedicine. 15 (1), pp. 9-13. https://doi.org/10.1016/j.jab.2016.09.004

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Exercise and epigenetic inheritance of disease risk
Denham, Joshua. 2018. "Exercise and epigenetic inheritance of disease risk." Acta Physiologica. 222 (1), pp. 1-20. https://doi.org/10.1111/apha.12881

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Sprint Interval Training Decreases Circulating MicroRNAs Important for Muscle Development
Denham, Joshua, Gray, Adrian, Scott-Hamilton, John and Hagstrom, Amanda D.. 2018. "Sprint Interval Training Decreases Circulating MicroRNAs Important for Muscle Development." International Journal of Sports Medicine. 39 (1), pp. 67-72. https://doi.org/10.1055/s-0043-120763

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microRNAs in High and Low Responders to Resistance Training in Breast Cancer Survivors
Hagstrom, Amanda D. and Denham, Joshua. 2018. "microRNAs in High and Low Responders to Resistance Training in Breast Cancer Survivors." International Journal of Sports Medicine. 39 (6), pp. 482-489. https://doi.org/10.1055/a-0592-7691

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The Effect of Resistance Training on Telomere Length in Women Recovering from Breast Cancer
Hagstrom, Amanda D. and Denham, Joshua. 2018. "The Effect of Resistance Training on Telomere Length in Women Recovering from Breast Cancer." Journal of Functional Morphology and Kinesiology. 3 (1), pp. 1-7. https://doi.org/10.3390/jfmk3010009

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Small non-coding RNAs are altered by short-term sprint interval training in men
Denham, Joshua, Gray, Adrian J., Scott-Hamilton, John, Hagstrom, Amanda D. and Murphy, Aron J.. 2018. "Small non-coding RNAs are altered by short-term sprint interval training in men." Physiological Reports. 6 (7), pp. 1-10. https://doi.org/10.14814/phy2.13653

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Leukocyte telomere length in the Thoroughbred racehorse
Denham, Josh and Denham, Michele M.. 2018. "Leukocyte telomere length in the Thoroughbred racehorse." Animal Genetics. 49 (5), pp. 452-456. https://doi.org/10.1111/age.12681

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Age-associated telomere shortening in Thoroughbred horses
Denham, Joshua, Stevenson, Kim and Denham, Michele M.. 2019. "Age-associated telomere shortening in Thoroughbred horses." Experimental Gerontology. 127, pp. 1-3. https://doi.org/10.1016/j.exger.2019.110718

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The association between sperm telomere length, cardiorespiratory fitness and exercise training in humans
Denham, Joshua. 2019. "The association between sperm telomere length, cardiorespiratory fitness and exercise training in humans." Biomedical journal. 42 (6), pp. 430-433. https://doi.org/10.1016/j.bj.2019.07.003

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Aerobic capacity and telomere length in human skeletal muscle and leukocytes across the lifespan
Hiam, Danielle, Smith, Cassandra, Voisin, Sarah, Denham, Josh, Yan, Xu, Landen, Shanie, Jacques, Macsue, Alvarez-Romero, Javier, Garnham, Andrew, Woessner, Mary N., Herrmann, Markus, Duque, Gustavo, Levinger, Itamar and Eynon, Nir. 2020. "Aerobic capacity and telomere length in human skeletal muscle and leukocytes across the lifespan." Aging. 12 (1), pp. 359-369. https://doi.org/10.18632/aging.102627

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Telomere regulation: lessons learnt from mice and men, potential opportunities in horses
Denham, Josh. 2020. "Telomere regulation: lessons learnt from mice and men, potential opportunities in horses." Animal Genetics. 51 (1), pp. 3-13. https://doi.org/10.1111/age.12870

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Emerging roles of extracellular vesicles in the intercellular communication for exercise-induced adaptations
Denham, Josh and Spencer, Sarah J.. 2020. "Emerging roles of extracellular vesicles in the intercellular communication for exercise-induced adaptations." American Journal of Physiology: Endocrinology and Metabolism. 319 (2), pp. E320-E329. https://doi.org/10.1152/ajpendo.00215.2020

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Transcriptome analysis reveals key genes associated with root‑lesion nematode Pratylenchus thornei resistance in chickpea
Channale, Sonal, Kalavikatte, Danamma, Thompson, John P., Kudapa, Himabindu, Bajaj, Prasad, Varshney, Rajeev K., Zwart, Rebecca S. and Thudi, Manhendar. 2021. "Transcriptome analysis reveals key genes associated with root‑lesion nematode Pratylenchus thornei resistance in chickpea." Scientific Reports. 11 (1), pp. 1-11. https://doi.org/10.1038/s41598-021-96906-3

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Genome-Wide Association and Selective Sweep Studies Reveal the Complex Genetic Architecture of DMI Fungicide Resistance in Cercospora beticola
Spanner, Rebecca, Taliadoros, Demetris, Richards, Jonathan, Rivera-Varas, Viviana, Neubauer, Jonathan, Natwick, Mari, Hamilton, Olivia, Vaghefi, Niloofar, Pethybridge, Sarah, Secor, Gary A., Friesen, Timothy L., Stukenbrock, Eva H. and Bolton, Melvin D.. 2021. "Genome-Wide Association and Selective Sweep Studies Reveal the Complex Genetic Architecture of DMI Fungicide Resistance in Cercospora beticola." Genome Biology and Evolution. 13 (9), pp. 1-17. https://doi.org/10.1093/gbe/evab209

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Regular, intense exercise training as a healthy aging lifestyle strategy: preventing DNA damage, telomere shortening and adverse DNA methylation changes over a lifetime
Sellami, Maha, Bragazzi, Nicola, Prince, Mohammad Shoaib, Denham, Joshua and Elrayess, Mohamed. 2021. "Regular, intense exercise training as a healthy aging lifestyle strategy: preventing DNA damage, telomere shortening and adverse DNA methylation changes over a lifetime." Frontiers in Genetics. 12, pp. 1-12. https://doi.org/10.3389/fgene.2021.652497

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Epigenetic control of exercise adaptations in the equine athlete: current evidence and future directions
Denham, Joshua, McCluskey, Michael, Denham, Michele M., Sellami, Maha and Davie, Alan J.. 2021. "Epigenetic control of exercise adaptations in the equine athlete: current evidence and future directions." Equine Veterinary Journal. 53 (3), pp. 431-450. https://doi.org/10.1111/evj.13320

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