Centre for Crop Health (Operations)


Latest research outputs

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A benzothiadiazole applied to foliage reduces development and egg deposition by Meloidogyne spp. in glasshouse-grown grapevine roots
Owen, K. J., Green, C.D. and Deverall, B.J.. 2002. "A benzothiadiazole applied to foliage reduces development and egg deposition by Meloidogyne spp. in glasshouse-grown grapevine roots ." Australasian Plant Pathology. 31 (1), pp. 47-53. https://doi.org/10.1071/AP01068

Article

A broad look at charcoal rot in the Northern Region broadacre crops through soil sampling and in-crop surveys
Adorada, D. L., Gonzales, P., McKay, A., Vaghefi, N. and Sparks, A. H.. 2018. "A broad look at charcoal rot in the Northern Region broadacre crops through soil sampling and in-crop surveys." 10th Australasian Soilborne Diseases Symposium: Paddock to Plates. Adelaide, Australia 04 - 08 Sep 2018 Australia.

Presentation

A case for re-inventory of Australia's plant pathogens
Hyde, K. D., Chomnunti, P., Crous, P. W., Groenewald, J. Z., Damm, U., Ko, T. W. Ko, Shivas, R. G., Summerell, B. A. and Tan, Y. P.. 2010. "A case for re-inventory of Australia's plant pathogens." Persoonia. 25, pp. 50-60. https://doi.org/10.3767/003158510X548668

Article

A co-evolutionary relationship exists between Endoraecium (Pucciniales) and its acacia hosts in Australia
McTaggart, A. R., Doungsa-Ard, C., Geering, A. D. W., Shivas, R. G. and Aime, M. C.. 2015. "A co-evolutionary relationship exists between Endoraecium (Pucciniales) and its acacia hosts in Australia." Persoonia. 35, pp. 50-62. https://doi.org/10.3767/003158515X687588

Article

A dynamic portal for a community-driven, continuously updated classification of Fungi and fungus-like organisms: outlineoffungi.org
Wijayawardene, N. N, Hyde, K. D, Dai, D. Q, Tang, L. Z, Aptroot, A, Castaneda-Ruiz, R. F, Druzhinina, I. S, Cai, F, Ekanayaka, A. H, Erdogdu, M, Fiuza, P. O, Gentekaki, E, Goto, B. T, Haelewaters, D, Hongsanan, S, Jeewon, R, Kirk, P. M, Jayalal, R. G. U, Karunarathna, S. C, ..., Thines, M. 2020. "A dynamic portal for a community-driven, continuously updated classification of Fungi and fungus-like organisms: outlineoffungi.org." Mycosphere Online: Journal of Fungal Biology. 11 (1), pp. 1514-1526. https://doi.org/10.5943/mycosphere/11/1/11

Article

A dynamic, web-based resource to identify rust fungi (Pucciniales) in southern Africa
McTaggart, Alistair R., Beasley, Dean R., Wingfield, Michael J., Wood, Alan R., Pretorius, Zakkie K., Drenth, Andre, Shivas, Roger G. and Roux, Jolanda. 2017. "A dynamic, web-based resource to identify rust fungi (Pucciniales) in southern Africa." MycoKeys. 26, pp. 77-83. https://doi.org/10.3897/mycokeys.26.14602

Article

A fresh look at grape powdery mildew (Erysiphe necator) A and B genotypes revealed frequent mixed infections and only B genotypes in flag shoot samples
Csikos, Anett, Nemeth, Mark Z., Frenkel, Omer, Kiss, Levente and Vaczy, Kalman Zoltan. 2020. "A fresh look at grape powdery mildew (Erysiphe necator) A and B genotypes revealed frequent mixed infections and only B genotypes in flag shoot samples." Plants. 9 (9), pp. 1-12. https://doi.org/10.3390/plants9091156

Article

A global-temporal analysis on Phytophthora sojae resistance-gene efficacy
McCoy, Austin G., Belanger, Richard R., Bradley, Carl A., Cerritos-Garcia, Daniel G., Garnica, Vinicius C., Giesler, Loren J., Grijalba, Pablo E., Guillin, Eduardo, Henriquez, Maria A., Kim, Yong Min, Malvick, Dean K., Matthiesen, Rashelle L., Mideros, Santiago X., Noel, Zachary A., Robertson, Alison E., Roth, Mitchell G., Schmidt, Clarice L., Smith, Damon L., Sparks, Adam H., ..., Chilvers, Martin I.. 2023. "A global-temporal analysis on Phytophthora sojae resistance-gene efficacy." Nature Communications. 14 (1). https://doi.org/10.1038/s41467-023-41321-7

Article

A hyperparasite affects the population dynamics of a wild plant pathogen
Tollenaere, C., Pernechele, B., Makinen, H. S., Parratt, S. R., Nemeth, M. Z., Kovacs, G. M., Kiss, L., Tack, A. J. M. and Laine, A.-L.. 2014. "A hyperparasite affects the population dynamics of a wild plant pathogen." Molecular Ecology. 23 (23), pp. 5877-5887. https://doi.org/10.1111/mec.12908

Article

A metamodeling framework for extending the application domain of process-based ecological models
Sparks, Adam H., Forbes, Gregory A., Hijmans, Robert and Garrett, Karen A.. 2011. "A metamodeling framework for extending the application domain of process-based ecological models." Ecosphere. 2 (8). https://doi.org/10.1890/ES11-00128.1

Article

A new host genus and species (Afzelia xylocarpa) for Phakopsora pachyrhizi found in Thailand
Seemadua, Suneerat, Bhasabutra, Tharntip, Beasley, Dean R., Tan, Yu Pei and Shivas, Roger G.. 2012. "A new host genus and species (Afzelia xylocarpa) for Phakopsora pachyrhizi found in Thailand." Australasian Plant Disease Notes. 7 (1), pp. 125-126. https://doi.org/10.1007/s13314-012-0064-8

Article

A Novel Approach to the Design and Analysis of Field Experiments to Study Variation in the Tolerance and Resistance of Cultivars to Root Lesion Nematodes (Pratylenchus spp.)
Reeves, Karyn L., Forknall, Clayton R., Kelly, Alison M., Owen, Kirsty J., Fanning, Joshua, Hollaway, Grant J. and Loughman, Robert. 2020. "A Novel Approach to the Design and Analysis of Field Experiments to Study Variation in the Tolerance and Resistance of Cultivars to Root Lesion Nematodes (Pratylenchus spp.)." Phytopathology: International Journal of the American Phytopathological Society. 110 (10), pp. 1623-1631. https://doi.org/10.1094/PHYTO-03-20-0077-R

Article

A phylogenetic and taxonomic re-evaluation of the Bipolaris - Cochliobolus - Curvularia Complex
Manamgoda, Dimuthu S., Cai, Lei, McKenzie, Eric H. C., Crous, Pedro W., Madrid, Hugo, Chukeatirote, Ekachai, Shivas, Roger G., Tan, Yu Pei and Hyde, Kevin D.. 2012. "A phylogenetic and taxonomic re-evaluation of the Bipolaris - Cochliobolus - Curvularia Complex." Fungal Diversity. 56 (1), pp. 131-144. https://doi.org/10.1007/s13225-012-0189-2

Article

A re-appraisal of Harknessia (Diaporthales), and the introduction of Harknessiaceae fam. nov
Crous, P. W., Summerell, B. A., Shivas, R. G., Carnegie, A. J. and Groenewald, J. Z.. 2012. "A re-appraisal of Harknessia (Diaporthales), and the introduction of Harknessiaceae fam. nov." Persoonia. 28, pp. 49-65. https://doi.org/10.3767/003158512X639791

Article

A review of the Ustilago-Sporisorium-Macalpinomyces complex
McTaggart, A. R., Shivas, R. G., Geering, A. D. W., Vanky, K. and Scharaschkin, T.. 2012. "A review of the Ustilago-Sporisorium-Macalpinomyces complex." Persoonia. 29, pp. 55-62. https://doi.org/10.3767/003158512X660283

Article

A review on common root rot of wheat and barley in Australia
Xiong, Yiyi, McCarthy, Cheryl, Humpal, Jacob and Percy, Cassandra. 2023. "A review on common root rot of wheat and barley in Australia." Plant Pathology. 72 (8), pp. 1347-1364. https://doi.org/10.1111/ppa.13777

Article

A review on crop losses, epidemiology and disease management of rice brown spot to identify research priorities and knowledge gaps
Barnwal, M. K., Kotasthane, A., Magculia, N., Mukherjee, P. K., Savary, S., Sharma, A. K., Singh, H. B., Singh, U. S., Sparks, A. H., Variar, M. and Zaidi, N.. 2013. "A review on crop losses, epidemiology and disease management of rice brown spot to identify research priorities and knowledge gaps." European Journal of Plant Pathology. 136 (3), pp. 443-457. https://doi.org/10.1007/s10658-013-0195-6

Article

A Scintillating Journey of Genomics in Simplifying Complex Traits and Development of Abiotic Stress Resilient Chickpeas
Jaganathan, Deepa, Mallikarjuna, Bingi Pujari, Palakurthi, Ramesh, Samineni, Srinivasan, Laxuman, C., Bharadwaj, Chellapilla, Zwart, Rebecca, Fikre, Asnake, Gaur, Pooran, Varshney, Rajeev K. and Thudi, Mahendar. 2022. "A Scintillating Journey of Genomics in Simplifying Complex Traits and Development of Abiotic Stress Resilient Chickpeas." Kole, Chittaranjan (ed.) Genomic Designing for Abiotic Stress Resistant Pulse Crops. Cham, Switzerland. Springer. pp. 15-43

Edited book (chapter)

A Short-Read Genome Assembly Resource for Leveillula taurica Causing Powdery Mildew Disease of Sweet Pepper (Capsicum annuum)
Kusch, Stefan, Nemeth, Mark Z., Vaghefi, Niloofar, Ibrahim, Heba M.M., Panstruga, Ralph and Kiss, Levente. 2020. "A Short-Read Genome Assembly Resource for Leveillula taurica Causing Powdery Mildew Disease of Sweet Pepper (Capsicum annuum)." Molecular Plant-Microbe Interactions. 33 (6), pp. 782-786. https://doi.org/10.1094/MPMI-02-20-0029-A

Article

A systematic review of the effects of arbuscular mycorrhizal fungi on root-lesion nematodes Pratylenchus spp.
Gough, Elaine C., Owen, Kirsty J., Zwart, Rebecca S. and Thompson, John P.. 2020. "A systematic review of the effects of arbuscular mycorrhizal fungi on root-lesion nematodes Pratylenchus spp." Frontiers in Plant Science. 11, pp. 1-14. https://doi.org/10.3389/fpls.2020.00923

Article

A triumph of tolerance: managing the threat to wheat production by the root lesion nematode Pratylenchus thornei in the subtropical grain region of eastern Australia
Owen, Kirsty J.. 2022. "A triumph of tolerance: managing the threat to wheat production by the root lesion nematode Pratylenchus thornei in the subtropical grain region of eastern Australia." Sikora, Richard A., Desaeger, Johan and Molendijk, Leendert (ed.) Integrated nematode management: state-of-the-art and visions for the future. Boston, United States. CABI. pp. 13-19

Edited book (chapter)

Aboveground herbivory suppresses the arbuscular mycorrhizal symbiosis, reducing plant phosphorus uptake
Frew, Adam. 2021. "Aboveground herbivory suppresses the arbuscular mycorrhizal symbiosis, reducing plant phosphorus uptake." Applied Soil Ecology. 168. https://doi.org/10.1016/j.apsoil.2021.104133

Article

Aboveground resource allocation in response to root herbivory as affected by the arbuscular mycorrhizal symbiosis
Frew, Adam, Powell, Jeff R. and Johnson, Scott N.. 2020. "Aboveground resource allocation in response to root herbivory as affected by the arbuscular mycorrhizal symbiosis." Plant and Soil: international journal on plant-soil relationships. 447 (1-2), pp. 463-473. https://doi.org/10.1007/s11104-019-04399-x

Article

Aizoago, a new genus, and two new species of smut fungi (Ustilaginales) on Tetragonia (Aizoaceae) in Australia
Vanky, Kalman and Shivas, Roger G.. 2013. "Aizoago, a new genus, and two new species of smut fungi (Ustilaginales) on Tetragonia (Aizoaceae) in Australia." Mycobiota. 1, pp. 1-7. https://doi.org/10.12664/mycobiota.2013.01.01

Article

Ampelomyces strains isolated from diverse powdery mildew hosts in Japan: Their phylogeny and mycoparasitic activity, including timing and quantifying mycoparasitism of Pseudoidium neolycopersici on tomato
Nemeth, Mark Z., Mizuno, Yuusaku, Kobayashi, Hiroki, Seress, Diana, Shishido, Naruki, Kimura, Yutaka, Takamatsu, Susumu, Suzuki, Tomoko, Takikawa, Yoshihiro, Kakutani, Koji, Matsuda, Yoshinori, Kiss, Levente and Nonomura, Teruo. 2021. "Ampelomyces strains isolated from diverse powdery mildew hosts in Japan: Their phylogeny and mycoparasitic activity, including timing and quantifying mycoparasitism of Pseudoidium neolycopersici on tomato." PLoS One. 16 (5), pp. 1-20. https://doi.org/10.1371/journal.pone.0251444

Article

An economic assessment of the impact of mango pulp weevil on the agricultural sector of Palawan, Philippines
McKinley, Justin D., Sparks, Adam H., Pede, Valerien O. and Duff, Bart. 2012. "An economic assessment of the impact of mango pulp weevil on the agricultural sector of Palawan, Philippines." The Philippine Agricultural Scientist: an international journal of tropical agriculture and related sciences. 95 (3), pp. 286-292.

Article

An improved method for selection of wheat genotypes for tolerance to crown rot caused by Fusarium pseudograminearum
Kelly, Alison, Macdonald, Bethany, Percy, Cassandra and Davies, Philip. 2021. "An improved method for selection of wheat genotypes for tolerance to crown rot caused by Fusarium pseudograminearum." Journal of Phytopathology. 169 (6), pp. 339-349. https://doi.org/10.1111/jph.12970

Article

An integrated approach of rice hull biochar-alternative water management as a promising tool to decrease inorganic arsenic levels and to sustain essential element contents in rice
Kumarathilaka, Prasanna, Bundschuh, Jochen, Seneweera, Saman and Ok, Yong Sik. 2021. "An integrated approach of rice hull biochar-alternative water management as a promising tool to decrease inorganic arsenic levels and to sustain essential element contents in rice." Journal of Hazardous Materials. 405, pp. 1-9. https://doi.org/10.1016/j.jhazmat.2020.124188

Article

An international perspective on genetic structure and gene flow in Cercospora beticola populations
Knight, N. L., Vaghefi, N., Kikkert, J., Bolton, M. D., Secor, G. A., Hanson, L., Nelson, S. C. and Pethybridge, S. J.. 2018. "An international perspective on genetic structure and gene flow in Cercospora beticola populations." 11th International Congress of Plant Pathology (ICPP 2018): Plant Health in a Global Economy. Boston, United States 29 Jul - 03 Aug 2018 St Paul, United States. American Phytopathological Society.

Poster

An introduction to key distributions and models in epidemiology using R
Garrett, Karen A., Esker, Paul D. and Sparks, Adam H.. 2015. "An introduction to key distributions and models in epidemiology using R." Stevenson, Katherine L. and Jeger, Michael J. (ed.) Exercises in plant disease epidemiology. St. Paul, Minnesota. American Phytopathological Society. pp. 3-14

Textbook (chapter)

Arbuscular mycorrhizal fungal diversity increases growth and phosphorus uptake in C3 and C4 crop plants
Frew, Adam. 2019. "Arbuscular mycorrhizal fungal diversity increases growth and phosphorus uptake in C3 and C4 crop plants." Soil Biology and Biochemistry. 135, pp. 248-250. https://doi.org/10.1016/j.soilbio.2019.05.015

Article

Arbuscular mycorrhizal fungi acted synergistically with Bradyrhizobium sp. to improve nodulation, nitrogen fixation, plant growth and seed yield of mung bean (Vigna radiata) but increased the population density of the root‑lesion nematode Pratylenchus thornei
Gough, Elaine C., Owen, Kirsty J., Zwart, Rebecca S. and Thompson, John P.. 2021. "Arbuscular mycorrhizal fungi acted synergistically with Bradyrhizobium sp. to improve nodulation, nitrogen fixation, plant growth and seed yield of mung bean (Vigna radiata) but increased the population density of the root‑lesion nematode Pratylenchus thornei." Plant and Soil: international journal on plant-soil relationships. 465 (1-2), pp. 431-452. https://doi.org/10.1007/s11104-021-05007-7

Article

Arbuscular mycorrhizal fungi promote silicon accumulation in plant roots, reducing the impacts of root herbivory
Frew, Adam, Powell, Jeff R., Allsopp, Peter G., Sallam, Nader and Johnson, Scott N.. 2017. "Arbuscular mycorrhizal fungi promote silicon accumulation in plant roots, reducing the impacts of root herbivory." Plant and Soil: international journal on plant-soil relationships. 419 (1-2), pp. 423-433. https://doi.org/10.1007/s11104-017-3357-z

Article

Arsenic accumulation in rice (Oryza sativa L.) is influenced by environment and genetic factors
Kumarathilaka, Prasanna, Seneweera, Saman, Meharg, Andrew and Bundschuh, Jochen. 2018. "Arsenic accumulation in rice (Oryza sativa L.) is influenced by environment and genetic factors." Science of the Total Environment. 642, pp. 485-496. https://doi.org/10.1016/j.scitotenv.2018.06.030

Article

Arsenic in cooked rice foods: assessing health risks and mitigation options
Kumarathilaka, Prasanna, Seneweera, Saman, Ok, Yong Sik, Meharg, Andrew and Bundschuh, Jochen. 2019. "Arsenic in cooked rice foods: assessing health risks and mitigation options." Environment International. 127, pp. 584-591. https://doi.org/10.1016/j.envint.2019.04.004

Article

Arsenic speciation dynamics in paddy rice soil-water environment: sources, physico-chemical, and biological factors - a review
Kumarathilaka, Prasanna, Seneweera, Saman, Meharg, Andrew and Bundschuh, Jochen. 2018. "Arsenic speciation dynamics in paddy rice soil-water environment: sources, physico-chemical, and biological factors - a review." Water Research. 140, pp. 403-414. https://doi.org/10.1016/j.watres.2018.04.034

Article

ascotraceR: An R Package Resource to Simulate the Spatiotemporal Spread of Ascochyta Blight in a Chickpea Field Over a Growing Season
Khaliq, Ihsanul, Melloy Paul and Sparks, Adam H.. 2022. "ascotraceR: An R Package Resource to Simulate the Spatiotemporal Spread of Ascochyta Blight in a Chickpea Field Over a Growing Season ." Phytopathology: International Journal of the American Phytopathological Society. 112 (9), pp. 2032-2035. https://doi.org/10.1094/PHYTO-01-22-0016-A

Notes or commentaries

Assessment of grain quality in terms of functional group response to elevated [CO2], water, and nitrogen using a meta‐analysis: grain protein, zinc, and iron under future climate
Al‐Hadeethi, Ikhlas, Li, Yan, Odhafa, Abdul Kareem H., Seneweera, Saman and Lam, Shu K.. 2019. "Assessment of grain quality in terms of functional group response to elevated [CO2], water, and nitrogen using a meta‐analysis: grain protein, zinc, and iron under future climate." Ecology and Evolution. 9 (13), pp. 7425-7437. https://doi.org/10.1002/ece3.5210

Article

Australia offers unique insight into the ecology of arbuscular mycorrhizal fungi: An opportunity not to be lost
Frew, Adam and Aguilar-Trigueros, Carlos A.. 2023. "Australia offers unique insight into the ecology of arbuscular mycorrhizal fungi: An opportunity not to be lost." Austral Ecology: a journal of ecology in the Southern Hemisphere. 48 (8), pp. 1713-1720. https://doi.org/10.1111/aec.13451

Article

Australia: A Continent Without Native Powdery Mildews? The First Comprehensive Catalog Indicates Recent Introductions and Multiple Host Range Expansion Events, and Leads to the Re-discovery of Salmonomyces as a New Lineage of the Erysiphales
Kiss, Levente, Vaghefi, Niloofar, Bransgrove, Kaylene, Dearnaley, John D. W., Takamatsu, Susumu, Tan, Yu Pei, Marston, Craig, Liu, Shu-Yan, Jin, Dan-Ni, Adorada, Dante L., Bailey, Jordan, Cabrera de Alvarez, Maria Graciela, Daly, Andrew, Dirchwolf, Pamela Maia, Jones, Lynne, Nguyen, Thuan Dat, Edwards, Jacqueline, Ho, Wellcome, Kelly, Lisa, ..., Braun, Uwe. 2020. "Australia: A Continent Without Native Powdery Mildews? The First Comprehensive Catalog Indicates Recent Introductions and Multiple Host Range Expansion Events, and Leads to the Re-discovery of Salmonomyces as a New Lineage of the Erysiphales." Frontiers in Microbiology. 11, pp. 1-31. https://doi.org/10.3389/fmicb.2020.01571

Article

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