31. Biological Sciences


Title31. Biological Sciences
ParentANZSRC Field of Research

Latest research outputs

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MiR-340-5p: a potential direct regulator of Nrf2 expression in post-exercise skeletal muscle of mice
Mei, Tao, Liu, Yujia, Wang, Jianxiong and Zhang, Ying. 2019. "MiR-340-5p: a potential direct regulator of Nrf2 expression in post-exercise skeletal muscle of mice." Molecular Medicine Reports. 19 (2), pp. 1340-1348. https://doi.org/10.3892/mmr.2018.9762

Article

Ray blight of pyrethrum in Australia: a review of the current status and future opportunities
Bhuiyan, M. A. H. B., Vaghefi, N. and Taylor, P. W. J.. 2019. "Ray blight of pyrethrum in Australia: a review of the current status and future opportunities." Plant Pathology. 68 (4), pp. 620-627. https://doi.org/10.1111/ppa.13000

Article

An international perspective on genetic structure and gene flow in Cercospora beticola populations
Knight, N. L., Vaghefi, N., Kikkert, J., Bolton, M. D., Secor, G. A., Hanson, L., Nelson, S. C. and Pethybridge, S. J.. 2018. "An international perspective on genetic structure and gene flow in Cercospora beticola populations." 11th International Congress of Plant Pathology (ICPP 2018): Plant Health in a Global Economy. Boston, United States 29 Jul - 03 Aug 2018 St Paul, United States. American Phytopathological Society.

Poster

Genetic structure of Phoma betae populations on Beta vulgaris in New York and Washington States, USA
Koenick, L., Knight, N. L., Vaghefi, N., du Toit, L. and Pethybridge, S. J.. 2018. "Genetic structure of Phoma betae populations on Beta vulgaris in New York and Washington States, USA." 11th International Congress of Plant Pathology (ICPP 2018): Plant Health in a Global Economy. Boston, United States 29 Jul - 03 Aug 2018 St Paul, United States.

Poster

A broad look at charcoal rot in the Northern Region broadacre crops through soil sampling and in-crop surveys
Adorada, D. L., Gonzales, P., McKay, A., Vaghefi, N. and Sparks, A. H.. 2018. "A broad look at charcoal rot in the Northern Region broadacre crops through soil sampling and in-crop surveys." 10th Australasian Soilborne Diseases Symposium. Adelaide, Australia 04 - 08 Sep 2018 Australia.

Presentation

Temporal shifts in genetic structure and differentiation of Cercospora beticola populations in table beet fields of New York
Knight, Noel L., Vaghefi, Niloofar, Hansen, Zachariah R., Kikkert, Julie R. and Pethybridge, Sarah J.. 2017. "Temporal shifts in genetic structure and differentiation of Cercospora beticola populations in table beet fields of New York." 2017 Annual Meeting of the Northeastern Division of the American Phytopathological Society. Quebec City, Canada 01 - 03 Nov 2017 St Paul, United States. American Phytopathological Society.

Presentation

Development of microsatellite markers for quantifying genetic diversity of Pleospora betae
Koenick, Lori, Vaghefi, Niloofar, Knight, Noel L., du Toit, Lindsey and Pethybridge, Sarah J.. 2017. "Development of microsatellite markers for quantifying genetic diversity of Pleospora betae." 2017 Annual Meeting of the Northeastern Division of the American Phytopathological Society. Quebec City, Canada 01 - 03 Nov 2017 St Paul, United States. American Phytopathological Society.

Presentation

Molecular mechanisms of growth responses to elevated atmospheric carbon dioxide in wheat (Triticum aestivum L.)
Gamage, Dananjali Mekhala. 2018. Molecular mechanisms of growth responses to elevated atmospheric carbon dioxide in wheat (Triticum aestivum L.). PhD Thesis Doctor of Philosophy. University of southern Queensland. https://doi.org/10.26192/5f69868cdccdf

PhD Thesis

Mechanisms of the decline in grain protein concentration in wheat under elevated atmospheric CO2 concentration
Thompson, Michael. 2018. Mechanisms of the decline in grain protein concentration in wheat under elevated atmospheric CO2 concentration. PhD Thesis Doctor of Philosophy. University of Southern Queensland. https://doi.org/10.26192/5f698219dccdc

PhD Thesis

Asexual and sexual morphs of Moesziomyces revisited
Kruse, Julia, Doehlemann, Gunther, Kemen, Eric and Thines, Marco. 2017. "Asexual and sexual morphs of Moesziomyces revisited." IMA Fungus: the global mycological journal. 8 (1), pp. 117-129. https://doi.org/10.5598/imafungus.2017.08.01.09

Article

(2507) Proposal to reject the name Ramularia gibba (Ustilaginomycotina: Entylomatales)
Kruse, Julia and Thines, Marco. 2017. "(2507) Proposal to reject the name Ramularia gibba (Ustilaginomycotina: Entylomatales)." Taxon: international journal of plant taxonomy, phylogeny and evolution. 66 (2), pp. 515-516. https://doi.org/10.12705/662.19

Article

Ustilago species causing leaf-stripe smut revisited
Kruse, Julia, Dietrich, Wolfgang, Zimmermann, Horst, Klenke, Friedemann, Richter, Udo, Richter, Heidrun and Thines, Marco. 2018. "Ustilago species causing leaf-stripe smut revisited." IMA Fungus: the global mycological journal. 9 (1), pp. 49-73. https://doi.org/10.5598/imafungus.2018.09.01.05

Article

Advanced biological, physical and chemical treatment of waste activated sludge
Trzcinski, Antoine Prandota. 2019. Advanced biological, physical and chemical treatment of waste activated sludge. Boca Raton, FL, United States. CRC Press.

Authored book

Low oxygen post conditioning prevents thalamic secondary neuronal loss caused by excitotoxicity after cortical stroke
Pietrogrande, Giovanni, Zalewska, Katarzyna, Zhao, Zidan, Abdolhoseini, Mahmoud, Chow, Wei Zhen, Sanchez-Bezanilla, Sonia, Ong, Lin Kooi, Johnson, Sarah J., Nilsson, Michael and Walker, Frederick R.. 2019. "Low oxygen post conditioning prevents thalamic secondary neuronal loss caused by excitotoxicity after cortical stroke." Scientific Reports. 9, pp. 1-9. https://doi.org/10.1038/s41598-019-39493-8

Article

Broad host range species in specialised pathogen groups should be treated with suspicion – a case study on Entyloma infecting Ranunculus
Kruse, J., Piatek, M., Lutz, M. and Thines, M.. 2018. "Broad host range species in specialised pathogen groups should be treated with suspicion – a case study on Entyloma infecting Ranunculus." Persoonia. 41, pp. 175-201. https://doi.org/10.3767/persoonia.2018.41.09

Article

New insights into the cellular mechanisms of plant growth at elevated atmospheric carbon dioxide concentrations
Gamage, Dananjali, Thompson, Michael, Sutherland, Mark, Hirotsu, Naoki, Makino, Amane and Seneweera, Saman. 2018. "New insights into the cellular mechanisms of plant growth at elevated atmospheric carbon dioxide concentrations." Plant, Cell and Environment. 41 (6), pp. 1233-1246. https://doi.org/10.1111/pce.13206

Article

Temporal genetic differentiation of Cercospora beticola populations in New York Table beet fields
Knight, Noel L., Vaghefi, Niloofar, Hansen, Zachariah R., Kikkert, Julie R. and Pethybridge, Sarah J.. 2018. "Temporal genetic differentiation of Cercospora beticola populations in New York Table beet fields." Plant Disease: an international journal of applied plant pathology. 102 (11), pp. 2074-2082. https://doi.org/10.1094/PDIS-01-18-0175-RE

Article

Concepts, approaches, and avenues for modelling crop health and crop losses
Savary, Serge, Nelson, Andrew D., Djurle, Annika, Esker, Paul D., Sparks, Adam H., Amorim, Lilian, Filho, Armamando Bergamin, Caffi, Tito, Castilla, Nancy, Garrett, Karen, McRoberts, Neil, Rossi, Vitorrio, Yuen, Jonathan and Willocquet, Laetitia. 2018. "Concepts, approaches, and avenues for modelling crop health and crop losses." European Journal of Agronomy. 100, pp. 4-18. https://doi.org/10.1016/j.eja.2018.04.003

Article

The origin and diversification of the Entorrhizales: deep evolutionary roots but recent speciation with a phylogenetic and phenotypic split between associates of the Cyperaceae and Juncaceae
Riess, Kai, Schon, Max E., Ziegler, Rebekka, Lutz, Matthias, Shivas, Roger G., Piatek, Marcin and Garnica, Sigisfredo. 2019. "The origin and diversification of the Entorrhizales: deep evolutionary roots but recent speciation with a phylogenetic and phenotypic split between associates of the Cyperaceae and Juncaceae." Organisms Diversity and Evolution. 19 (1), pp. 13-30. https://doi.org/10.1007/s13127-018-0384-4

Article

Environmental effects are stronger than human effects on mammalian predator-prey relationships in arid Australian ecosystems
Allen, Benjamin L., Fawcett, Alana, Anker, Alison, Engeman, Richard M., Lisle, Allan and Leung, Luke K.-P.. 2018. "Environmental effects are stronger than human effects on mammalian predator-prey relationships in arid Australian ecosystems." Science of the Total Environment. 610-611, pp. 451-461. https://doi.org/10.1016/j.scitotenv.2017.08.051

Article

Linear modelling of soil temperature effects on root lesion nematode population densities in R [Blog post]
Sparks, Adam H. and Thompson, John P.. 2018. "Linear modelling of soil temperature effects on root lesion nematode population densities in R [Blog post]." Open Plant Pathology Notes. February 2018, pp. 1-24. https://doi.org/10.5281/zenodo.1173391

Letter

The first smut fungus, Thecaphora anthemidis sp. nov. (Glomosporiaceae), described from Anthemis (Asteraceae)
Kruse, Julia, Kummer, Volker, Shivas, Roger G. and Thines, Marco. 2018. "The first smut fungus, Thecaphora anthemidis sp. nov. (Glomosporiaceae), described from Anthemis (Asteraceae)." MycoKeys. 41, pp. 39-50. https://doi.org/10.3897/mycokeys.41.28454

Article

First report of powdery mildew on goji berry (Lycium barbarum) caused by arthrocladiella mougeotii in Queensland, Australia
Kiss, L., Stuart, K., Grigg, J., Calvert, J. and Dearnaley, J. D. W.. 2018. "First report of powdery mildew on goji berry (Lycium barbarum) caused by arthrocladiella mougeotii in Queensland, Australia." Plant Disease: an international journal of applied plant pathology. 102 (2), p. 446. https://doi.org/10.1094/PDIS-07-17-1055-PDN

Article

Effects of acute hypoxia exposure with different durations on activation of Nrf2-ARE pathway in mouse skeletal muscle
Ji, Weixiu, Wang, Linjia, He, Shiyi, Yan, Lu, Li, Tieying, Wang, Jianxiong, Kong, Ah-Ng Tony, Yu, Siwang and Zhang, Ying. 2018. "Effects of acute hypoxia exposure with different durations on activation of Nrf2-ARE pathway in mouse skeletal muscle." PLoS One. 13 (12), pp. 1-15. https://doi.org/10.1371/journal.pone.0208474

Article

Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata
Wingfield, Brenda D., Bills, Gerald F., Dong, Yang, Huang, Wenli, Nel, Wilma J., Swalarsk-Parry, Benedicta S., Vaghefi, Niloofar, Wilken, Markus P., An, Zhiqiang, de Beer, Z. Wilhelm, De Vos, Lieschen, Chen, Li, Duong, Tuan A., Gao, Yun, Hammerbacher, Almuth, Kikkert, Julie R., Li, Yan, Li, Huiying, Li, Kuan, ..., Zhang, Xiaoling. 2018. "Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata." IMA Fungus: the global mycological journal. 9 (1), pp. 199-223. https://doi.org/10.5598/imafungus.2018.09.01.13

Article

Summer paddock survey finds fungal and bacterial diseases decreased but not eliminated [GRDC Field Crop Diseases Community of Practice, 1 October 2018 - Online community]
Adorada, Dante, Kelly, Lisa, Vaghefi, Niloofar and Sparks, Adam H,. 2018. "Summer paddock survey finds fungal and bacterial diseases decreased but not eliminated [GRDC Field Crop Diseases Community of Practice, 1 October 2018 - Online community]." GRDC Field Crop Diseases Community of Practice. 1 October 2018, pp. 1-8.

Letter

DAQ00186 2017 progress report: improving grower surveillance, management, epidemiology, knowledge and tools to manage crop disease
Sparks, Adam H., Adorada, Dante L., Adorada, Encar, Gonzales, Precila, Kelly, Lisa, Sharman, Murray and Grams, Raechelle. 2017. DAQ00186 2017 progress report: improving grower surveillance, management, epidemiology, knowledge and tools to manage crop disease. Australia. Grains Research and Development Corporation.

Project report

DAQ00186 2016 progress report: improving grower surveillance, management, epidemiology, knowledge and tools to manage crop disease
Sparks, Adam H., Adorada, Dante, Kelly, Lisa, Sharman, Murray, Thompson, Sue, Wenham, Kylie, White, Jodie and Grams, Raechelle. 2017. DAQ00186 2016 progress report: improving grower surveillance, management, epidemiology, knowledge and tools to manage crop disease. Australia. Grains Research and Development Corporation.

Project report

Diagnosing plant diseases: what do we ask and why do we ask for it? [Online community]
Adorada, Dante L., Sigel, Louise, Kelly, Lisa and Sparks, Adam. 2017. "Diagnosing plant diseases: what do we ask and why do we ask for it? [Online community]." GRDC Communities.

Article

Mungbean powdery mildew management with fungicide [Online community]
Sparks, Adam and Kelly, Lisa. 2017. "Mungbean powdery mildew management with fungicide [Online community]." GRDC Communities. 15 December 2017.

Article

Utilisation of stranded marine fauna washed ashore on K’gari (Fraser Island), Australia, by dingoes
Behrendorff, Linda, Leung, Luke K.-P. and Allen, Benjamin L.. 2018. "Utilisation of stranded marine fauna washed ashore on K’gari (Fraser Island), Australia, by dingoes." Australian Journal of Zoology. 66 (2), pp. 128-138. https://doi.org/10.1071/ZO18022

Article

We built a network of greenhouses and rain shelters to simulate what climate change will do to soils
Hopkins, Anna, Birnbaum, Christina, Fontaine, Joe and Enright, Neal. 2019. "We built a network of greenhouses and rain shelters to simulate what climate change will do to soils." The Conversation.

Blog

Using crop growth model stress covariates and AMMI decomposition to better predict genotype by environment interactions
Rincent, R., Malosetti, M., Collins, B., Ababaei, B., Touzy, G., Mini, A., Bogard, M., Martre, P., Le Gouis, J. and van Eeuwijk, F.. 2019. "Using crop growth model stress covariates and AMMI decomposition to better predict genotype by environment interactions." Theoretical and Applied Genetics: international journal of plant breeding research. 132 (12), pp. 3399-3411. https://doi.org/10.1007/s00122-019-03432-y

Article

A chromosome‐scale genome assembly reveals a highly dynamic effector repertoire of wheat powdery mildew
Müller, Marion C., Praz, Coraline R., Sotiropoulos, Alexandros G., Menardo, Fabrizio, Kunz, Lukas, Schudel, Seraina, Oberhänsli, Simone, Poretti, Manuel, Wehrli, Andreas and Bourras, Salim. 2019. "A chromosome‐scale genome assembly reveals a highly dynamic effector repertoire of wheat powdery mildew." New Phytologist. 221 (4), pp. 2176-2189. https://doi.org/10.1111/nph.15529

Article

Acute exposure to diesel exhaust induces central nervous system stress and altered learning and memory in honey bees
Reitmayer, Christine M., Ryalls, James M. W., Farthing, Emily, Jackson, Christopher W., Girling, Robbie D. and Newman, Tracey A.. 2019. "Acute exposure to diesel exhaust induces central nervous system stress and altered learning and memory in honey bees." Scientific Reports. 9 (1), p. 5793. https://doi.org/10.1038/s41598-019-41876-w

Article

Field assessments of the effects of elevated ozone and diesel exhaust emissions on insect pollination services
Girling, R., Ryalls, J., Mullinger, N., Langford, B., Nemitz, E. and Pfrang, C.. 2019. "Field assessments of the effects of elevated ozone and diesel exhaust emissions on insect pollination services." International Society of Chemical Ecology Annual Meeting 2019. Atlanta, Georgia, USA 02 - 06 Jun 2019

Presentation

Ecology and distribution of cabbage stem flea beetle and its parasitoids in UK oilseed rape crops: steps towards Integrated Pest Management
Ortega-Ramos, Patricia, Girling, Robbie, Mauchline, Alice, Collins, Larissa and Cook, Sam. 2019. "Ecology and distribution of cabbage stem flea beetle and its parasitoids in UK oilseed rape crops: steps towards Integrated Pest Management." Cook, Samantha M, Jedryczka, Malgorzata, Juran, Ivan and Truman, William (ed.) Integrated Control in Oilseed Crops. Zagreb, Croatia 18 - 20 Sep 2018 Croatia.

Paper

Current status of the Botryosphaeriaceae in Australia
Burgess, Treena I., Tan, Yu Pei, Garnas, Jeff, Edwards, Jacqueline, Scarlett, Kelly A., Shuttleworth, Lucas A., Daniel, Rosalie, Dann, Elizabeth K., Parkinson, Louisamarie E., Dinh, Quang, Shivas, Roger G. and Jami, Fahimeh. 2019. "Current status of the Botryosphaeriaceae in Australia." Australasian Plant Pathology. 48 (1), pp. 35-44. https://doi.org/10.1007/s13313-018-0577-5

Article

Breaking free: The genomics of allopolyploidy-facilitated niche expansion in white clover
Griffiths, Andrew G., Moraga, Roger, Tausen, Marni, Gupta, Vikas, Bilton, Timothy P., Campbell, Matthew A., Ashby, Rachael, Nagy, Istvan, Khan, Anar, Larking, Anna, Anderson, Craig, Franzmayr, Benjamin, Hancock Kerry, Scott, Alicia, Ellison,Nick W., Cox, Murray P., Asp, Torben, Mailund, Thomas, Schierup, Mikkel H. and Andersen, Stig Uggerhøj. 2019. "Breaking free: The genomics of allopolyploidy-facilitated niche expansion in white clover." The Plant Cell. 31 (7), pp. 1466-1487. https://doi.org/10.1105/tpc.18.00606

Article

Achacha (Garcinia humilis) Rind Improves Cardiovascular Function in Rats with Diet-Induced Metabolic Syndrome
John, Oliver D., Wanyonyi, Stephen, Mouatt, Peter, Panchal, Sunil K. and Brown, Lindsay. 2018. "Achacha (Garcinia humilis) Rind Improves Cardiovascular Function in Rats with Diet-Induced Metabolic Syndrome." Nutrients. 10 (10), pp. 1-15. https://doi.org/10.3390/nu10101425

Article