Establishment and characterisation of wheat genetic mapping populations

Article

Kammholz, S. J., Campbell, A. W., Sutherland, M. W., Hollamby, G. J., Martin, P. J., Eastwood, R. F., Barclay, I., Wilson, R. E., Brennan, P. S. and Sheppard, J. A.. 2001. "Establishment and characterisation of wheat genetic mapping populations ." Australian Journal of Agricultural Research. 52 (11/12), pp. 1079-1088. https://doi.org/10.1071/AR01043
Article Title

Establishment and characterisation of wheat genetic mapping populations

ERA Journal ID5177
Article CategoryArticle
AuthorsKammholz, S. J. (Author), Campbell, A. W. (Author), Sutherland, M. W. (Author), Hollamby, G. J. (Author), Martin, P. J. (Author), Eastwood, R. F. (Author), Barclay, I. (Author), Wilson, R. E. (Author), Brennan, P. S. (Author) and Sheppard, J. A. (Author)
Journal TitleAustralian Journal of Agricultural Research
Journal Citation52 (11/12), pp. 1079-1088
Number of Pages10
Year2001
PublisherCSIRO Publishing
Place of PublicationAustralia
ISSN0004-9409
1444-9838
Digital Object Identifier (DOI)https://doi.org/10.1071/AR01043
Web Address (URL)https://www.publish.csiro.au/cp/AR01043
Abstract

Doubled haploid populations from 5 carefully selected wheat (Triticum aestivum L.) crosses were established in order to produce genetic maps. The characterisation of the parental material included pedigree analyses to define the extent of the genetic relationships among the lines and to determine the occurrence of alien chromosome segments that may contribute to segregation distortion. The characterisation of the parents also defined the range of grain quality traits that could be examined in the lines derived from each cross. Populations of up to 321 lines were produced using wide cross-mediated doubled haploid production from F1 plants. Assessment of the lines for heterogeneity was carried out using readily identifiable phenotypic markers and electrophoresis of seed storage proteins, with 2.3–11.6% of the lines being removed from further analysis. Segregation distortion was estimated in several populations where sufficient information from genetic markers was available. In a Sunco/Tasman doubled haploid population, heterogeneity was detected between the first 51 lines and the remainder of the mapping population and this could be traced to F1 plants that were produced from an earlier set of crosses. χ2 tests on the mapping data available for the Cranbrook/Halberd, CD87/Katepwa, and Sunco/Tasman doubled haploid populations revealed segregation distortion at rates of 1.8%, 5.1%, and 12.5% respectively. Whereas the wide-cross doubled haploid protocol does not appear responsible for the bulk of the non-Mendelian segregation observed, several potential sources were identified. In particular, clustering of distorted loci at specific chromosome regions appeared to be associated with the presence of alien introgressions in one of the parents. This was especially marked in the Sunco/Tasman population. Providing such distortions are recognised in the models used, these populations provide powerful tools for extensive mapping studies to determine the genetic factors controlling grain quality traits and other wheat characters of interest.

Keywordsdoubled haploid; wheat; maize; gene segregation; segregation distortion
ANZSRC Field of Research 2020310506. Gene mapping
300406. Crop and pasture improvement (incl. selection and breeding)
310599. Genetics not elsewhere classified
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Byline AffiliationsCentre for Rural and Environmental Biotechnology
Department of Biological and Physical Sciences
University of Adelaide
Charles Sturt University
Department of Natural Resources and Environment, Victoria
Department of Agriculture, Western Australia
Grains Research and Development Corporation, Australia
Department of Primary Industries and Fisheries, Queensland
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Nicol, J. M., Sahin, E., Wallwork, H., Chakraborty, S., Lu, M., O'Brien, L., Sutherland, M., Horne, M., Simpfendorfer, S., Herde, D., Ogbonnaya, F., Duvellier, E., Bolat, N., Yahyaoui, A., Buerstmayr, H., Lewis, J., Crossa, J., Singh, A. K., Bishnoi, S. P., ..., Gargouri, S.. 2008. "Identification of multiple root disease resistant wheat germplasm against cereal nematodes and dryland root rot and their validation in regions of economic importance." Appels, Rudi (ed.) 11th International Wheat Genetics Symposium 2008 (IWGS 2008). Brisbane, Australia 24 - 29 Aug 2008 Sydney, Australia.
Composite yarns of multi-walled carbon nanotubes with metallic electrical conductivity
Randeniya, Lakshman K., Bendavid, Avi, Martin, Philip J. and Tran, Canh-Dung. 2010. "Composite yarns of multi-walled carbon nanotubes with metallic electrical conductivity." Small. 6 (16), pp. 1806-1811. https://doi.org/10.1002/smll.201000493
Mapping spot blotch resistance genes in four barley populations
Bovill, Jessica, Lehmensiek, Anke, Sutherland, Mark W., Platz, Greg. J., Usher, Terry, Franckowiak, Jerome and Mace, Emma. 2010. "Mapping spot blotch resistance genes in four barley populations." Molecular Breeding: new strategies in plant improvement. 26 (4), pp. 653-666. https://doi.org/10.1007/s11032-010-9401-9
Chromosome composition of an F2 Triticum aestivum × T. turgidum spp. durum cross analysed by DArT markers and MCFISH
Eberhard, Friederike S., Zhang, Peng, Lehmensiek, Anke, Hare, Ray A., Simpfendorfer, Steven and Sutherland, Mark W.. 2010. "Chromosome composition of an F2 Triticum aestivum × T. turgidum spp. durum cross analysed by DArT markers and MCFISH." Crop and Pasture Science. 61 (8), pp. 619-624. https://doi.org/10.1071/CP10131
An investigation of genetic variation among Australian isolates of Bipolaris sorokiniana from different cereal tissues and comparison of their abilities to cause spot blotch on barley
Knight, N. L., Platz, G. J., Lehmensiek, A. and Sutherland, M. W.. 2010. "An investigation of genetic variation among Australian isolates of Bipolaris sorokiniana from different cereal tissues and comparison of their abilities to cause spot blotch on barley." Australasian Plant Pathology. 39 (3), pp. 207-216. https://doi.org/10.1071/AP09082
Genomic regions associated with common root rot resistance in the barley variety Delta
Lehmensiek, A., Bovill, J., Sutherland, M. W. and McNamara, R. B.. 2010. "Genomic regions associated with common root rot resistance in the barley variety Delta." Australasian Plant Pathology. 39 (3), pp. 241-246. https://doi.org/10.1071/AP09089
Population structure of South African and Australian Pyrenophora teres isolates
Lehmensiek, A., Bester-van der Merwe, A. E., Sutherland, M. W., Platz, G., Kriel, W. M., Potgieter, G. F. and Prins, R.. 2010. "Population structure of South African and Australian Pyrenophora teres isolates." Plant Pathology. 59 (3), pp. 504-515. https://doi.org/10.1111/j.1365-3059.2009.02231.x
Pyramiding QTL increases seedling resistance to crown rot (Fusarium pseudograminearum) of wheat (Triticum aestivum)
Bovill, W. D., Horne, M., Herde, D., Davis, M., Wildermuth, G. B. and Sutherland, M. W.. 2010. "Pyramiding QTL increases seedling resistance to crown rot (Fusarium pseudograminearum) of wheat (Triticum aestivum)." Theoretical and Applied Genetics: international journal of plant breeding research. 121 (1), pp. 127-136. https://doi.org/10.1007/s00122-010-1296-7
The generation of oxygen radicals during host plant responses to infection
Sutherland, Mark W.. 1991. "The generation of oxygen radicals during host plant responses to infection." Physiological and Molecular Plant Pathology. 39 (1), pp. 71-93.
Genes involved in hypersensitive cell death responses during fusarium crown rot infection in wheat
Petrisko, Jill E., Sutherland, Mark W. and Windes, Juliet M.. 2009. "Genes involved in hypersensitive cell death responses during fusarium crown rot infection in wheat." Guest, David (ed.) 17th Biennial Australasian Plant Pathology Society Conference (APPS 2009): Plant Health Management: An Integrated Approach. Newcastle, Australia 29 Sep - 01 Oct 2009 Toowoomba, Australia.
Bipolaris sorokiniana resistance loci identified on chromosomes 3HS and 7HS in three related barley
Sutherland, M. W., Lehmensiek, A., Leist, C., Platz, G. and Usher, T. R.. 2009. "Bipolaris sorokiniana resistance loci identified on chromosomes 3HS and 7HS in three related barley." Poulsen, David (ed.) ABTS 2009: Barley - The Grain for Gain. Sunshine Coast, Australia 13 - 16 Sep 2009 Indooroopilly, Australia.
Chromosome composition in an F2 hexaploid x durum cross analysed by DArT markers and MCFISH
Eberhard, F. S., Zhang, P., Lehmensiek, A., Sutherland, M. W., Hare, R. and Simpfendorfer, S.. 2008. "Chromosome composition in an F2 hexaploid x durum cross analysed by DArT markers and MCFISH." Appels, Rudi, Eastwood, Russell, Lagudah, Evans, Mackay, Michael, McIntyre, Lynne, Sharp, Peter and Langridge, Peter (ed.) 11th International Wheat Genetics Sympoium (IWGS 2008). Brisbane, Australia 24 - 29 Aug 2008 Sydney, Australia.
The application of molecular markers for partial resistance against fusarium crown rot in hexaploid and tetraploid wheats
Sutherland, Mark, Bovill, W. D., Horne, M., Lehmensiek, A., Eberhard, F., Percy, C., Wildermuth, G. B., Simpfendorfer, S. and Hare, R.. 2008. "The application of molecular markers for partial resistance against fusarium crown rot in hexaploid and tetraploid wheats." 10th International Fusarium and Fusarium Genomics Workshop 2008. Sardinia, Italy 30 Aug - 02 Sep 2008 Sardinia,Italy.
Segregation of glutenins in wheatxmaize-derived doubled haploid wheat populations
Kammholz, Stephen J., Grams, Raechelle A., Banks, Phillip and Sutherland, Mark W.. 1998. "Segregation of glutenins in wheatxmaize-derived doubled haploid wheat populations." Australian Journal of Agricultural Research. 49 (8), pp. 1253-1259. https://doi.org/10.1071/A98032
Use of a new tetrazolium-based assay to study the production of superoxide radicals by tobacco cell cultures challenged with avirulent zoospores of Phytopthora parasitica var nicotianae
Able, Amanda J., Guest, David I. and Sutherland, Mark W.. 1998. "Use of a new tetrazolium-based assay to study the production of superoxide radicals by tobacco cell cultures challenged with avirulent zoospores of Phytopthora parasitica var nicotianae." Plant Physiology. 117 (2), pp. 491-499.
The tetrazolium dyes MTS and XTT provide new quantitative assays for superoxide and superoxide dismutase
Sutherland, Mark W. and Learmonth, Barbara A.. 1997. "The tetrazolium dyes MTS and XTT provide new quantitative assays for superoxide and superoxide dismutase." Free Radical Research. 27 (3), pp. 283-289. https://doi.org/10.3109/10715769709065766
Improving the efficiency of haploid wheat production mediated by wide crossing
Kammholz, Stephen J., Sutherland, Mark W. and Banks, Phillip. 1996. "Improving the efficiency of haploid wheat production mediated by wide crossing." Sabrao Journal. 28, pp. 37-46.
Hydrogen peroxide yields during the incompatible interaction of tobacco suspension cells inoculated with Phytophthora nicotiannae
Able, Amanda J., Guest, David I. and Sutherland, Mark W.. 2000. "Hydrogen peroxide yields during the incompatible interaction of tobacco suspension cells inoculated with Phytophthora nicotiannae." Plant Physiology. 124 (2), pp. 899-910.
Relationship between transembrane ion movements, production of reactive oxygen species and the hypersensitive response during the challenge of tobacco suspension cells by zoospores of Phytophthora nicotianae
Able, Amanda J., Guest, David I. and Sutherland, Mark W.. 2001. "Relationship between transembrane ion movements, production of reactive oxygen species and the hypersensitive response during the challenge of tobacco suspension cells by zoospores of Phytophthora nicotianae." Physiological and Molecular Plant Pathology. 58 (5), pp. 189-198. https://doi.org/10.1006/pmpp.2001.0328
High and low pre-inoculation temperatures decrease the effectiveness of the Lr20 and Sr15 rust resistance genes in wheat
Ramage, R. A and Sutherland, Mark W.. 1995. "High and low pre-inoculation temperatures decrease the effectiveness of the Lr20 and Sr15 rust resistance genes in wheat." Plant Pathology. 44 (5), pp. 772-778. https://doi.org/10.1111/j.1365-3059.1995.tb02734.x
Mapping QTLs for polyphenol oxidase activity in a DH population from common wheat
Zhang, Li-Ping, Ge, Xiu-Xiu, He, Zhong-Hu, Wang, De-Sen, Yan, Jun, Xia, Xian-Chun and Sutherland, Mark W.. 2005. "Mapping QTLs for polyphenol oxidase activity in a DH population from common wheat." Zuowu Xuebao. 31 (1), pp. 7-10.
Biological methods: a novel course in undergraduate biology
Kotiw, Michael, Learmonth, Robert P. and Sutherland, Mark W.. 1999. "Biological methods: a novel course in undergraduate biology." Biochemical Education. 27 (3), pp. 131-134. https://doi.org/10.1016/S0307-4412(99)00002-3
Mapping markers for priority traits in the northern grains region of Australia
Mace, E., Sutherland, Mark, Lehmensiek, Anke, Bovill, Bill, Bovill, Jessica, Collard, Bert, Daggard, Grant and Christopher, M. J.. 2006. "Mapping markers for priority traits in the northern grains region of Australia." ITMI Workshop and ACPFG Genomics Symposium (2006). Victor Harbour, Australia 27 - 31 Aug 2006
Genetic control of dormancy in white-grained wheats of diverse origin
Mares, Daryl, Mrva, Kolumbina, Cheong, Judy, Williams, Kevin, Cavallaro, Benedette, Storlie, Eric, Sutherland, Mark and Zou, Y.. 2004. "Genetic control of dormancy in white-grained wheats of diverse origin." Black, C. K., Panozzo, J. F. and Rebetzke, G. J. (ed.) 54th Australian Cereal Chemistry Conference (CEREALS 2004). Canberra, Australia 21 - 24 Sep 2004 Melbourne, Australia.
Identification of novel QTL for resistance to crown rot in the doubled haploid wheat population 'W21MMT70' x 'Mendos'
Bovill, W. D., Ma, W., Ritter, K., Collard, B. C. Y., Davis, M., Wildermuth, G. B. and Sutherland, M. W.. 2006. "Identification of novel QTL for resistance to crown rot in the doubled haploid wheat population 'W21MMT70' x 'Mendos' ." Plant Breeding. 125 (6), pp. 538-543. https://doi.org/10.1111/j.1439-0523.2006.01251.x
Effectiveness of partial resistance sources in hexaploid wheats against fusarium pseudograminearum isolates
Percy, C. D., Wildermuth, G. B. and Sutherland, Mark W.. 2005. "Effectiveness of partial resistance sources in hexaploid wheats against fusarium pseudograminearum isolates." Cahill, David (ed.) 15th Biennial Australasian Plant Pathology Society Conference. Geelong, Australia 26 - 29 Sep 2005 Geelong, Australia.
Strategies for fine mapping QTLs for crown rot resistance in wheats
Bovill, W. D., Collard, B. C. Y., Lehmensiek, Anke, Wildermuth, G. B. and Sutherland, Mark W.. 2005. "Strategies for fine mapping QTLs for crown rot resistance in wheats." Cahill, David (ed.) 15th Biennial Australasian Plant Pathology Society Conference. Geelong, Australia 26 - 29 Sep 2005 Geelong.
Targetting AFLP-DNA markers to specific traits and chromosome regions
Campbell, A. W., Daggard, G., Békés, F., Pedler, A., Sutherland, M. W and Appels, R.. 2001. "Targetting AFLP-DNA markers to specific traits and chromosome regions ." Australian Journal of Agricultural Research. 52 (11-12), pp. 1153-1160. https://doi.org/10.1071/ar01028
The statistical analysis of quality traits in plant improvement programs with application to the mapping of milling yield in wheat
Smith, A. B., Cullis, B. R., Appels, R., Campbell, A. W., Cornish, G. B., Martin, D. and Allen, H. M.. 2001. "The statistical analysis of quality traits in plant improvement programs with application to the mapping of milling yield in wheat." Australian Journal of Agricultural Research. 52 (12), pp. 1207-1219. https://doi.org/10.1071/AR01058
Mapping components of flour and noodle colour in Australian wheat
Mares, D. J. and Campbell, A. W.. 2001. "Mapping components of flour and noodle colour in Australian wheat." Australian Journal of Agricultural Research. 52 (11/12), pp. 1297-1309. https://doi.org/10.1071/AR01048