Use of SSR markers to determine the genetic purity of a popular Australian wheat variety and consequences for stripe rust reactions

Article


Simpfendorfer, S., Martin, A. and Sutherland, M. W.. 2013. "Use of SSR markers to determine the genetic purity of a popular Australian wheat variety and consequences for stripe rust reactions." Seed Science and Technology. 41 (1), pp. 98-106. https://doi.org/10.15258/sst.2013.41.1.09
Article Title

Use of SSR markers to determine the genetic purity of a popular Australian wheat variety and consequences for stripe rust reactions

ERA Journal ID5326
Article CategoryArticle
AuthorsSimpfendorfer, S. (Author), Martin, A. (Author) and Sutherland, M. W. (Author)
Journal TitleSeed Science and Technology
Journal Citation41 (1), pp. 98-106
Number of Pages9
Year2013
Place of PublicationBassersdorf, Switzerland
ISSN0251-0952
1819-5717
Digital Object Identifier (DOI)https://doi.org/10.15258/sst.2013.41.1.09
Web Address (URL)https://www.ingentaconnect.com/content/ista/sst/2013/00000041/00000001/art00009
Abstract

Sunvale is a popular bread wheat variety grown throughout central and northern New South Wales in Australia which has moderate resistance to the fungal leaf disease stripe rust. However, significant levels of stripe rust have been reported in Sunvale crops over the past few seasons. Sunvale is a 17-year-old variety so genetic purity may also be involved in the numerous reports of increased disease susceptibility in grower crops. Twelve SSR markers were used to determine the genetic purity of 23 grower-retained seed lots of cv. Sunvale. Sixteen of the 23 grower-retained Sunvale seed lots (70%) contained at least 5% contamination from a different genotype, while seven samples (30%) contained > 10% contamination. The SSR analysis was complemented by field observations of the various seed lots in a replicated small plot trial. In 17 of the 19 grower-retained Sunvale seed lots that had some level of contamination with another genotype(s), at least one contaminant was very susceptible to stripe rust. The pure Sunvale plants in the plots showed a moderately resistant reaction. This is the first report of seed impurity being definitively determined as the cause of unexpected stripe rust responses within a wheat variety.

Keywordsbread; Australia; disease resistance; stripe rust; genetic makeup
ANZSRC Field of Research 2020310506. Gene mapping
300409. Crop and pasture protection (incl. pests, diseases and weeds)
300101. Agricultural biotechnology diagnostics (incl. biosensors)
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Byline AffiliationsDepartment of Industry and Investment, New South Wales
Centre for Systems Biology
Institution of OriginUniversity of Southern Queensland
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Yang, Ennian, Zou, Yuchun, Yang, Wuyun and Sutherland, Mark. 2006. "Inheritance of resistance to Chinese stripe rust on Australian wheat variety Sunco." Chinese Agricultural Science Bulletin. 22 (5), pp. 355-357.
Flour yield QTLs in three Australian doubled haploid wheat populations
Lehmensiek, A., Eckermann, P. J., Verbyla, A. P., Appels, R., Sutherland, M. W., Martin, D. and Daggard, G. E.. 2006. "Flour yield QTLs in three Australian doubled haploid wheat populations." Australian Journal of Agricultural Research. 57 (10), pp. 1115-1122. https://doi.org/10.1071/AR05375
Development of molecular markers for crown rot resistance in wheat: mapping of QTLs for seedling resistance in a '2-49' x 'Janz' population
Collard, B. C. Y., Grams, R. A., Bovill, W. D., Percy, C. D., Jolley, R., Lehmensiek, A., Wildermuth, G. B. and Sutherland, M. W.. 2005. "Development of molecular markers for crown rot resistance in wheat: mapping of QTLs for seedling resistance in a '2-49' x 'Janz' population." Plant Breeding. 124 (6), pp. 532-537. https://doi.org/10.1111/j.1439-0523.2005.01163.x
A QTL located on chromosome 4A associated with dormancy in white- and red-grained wheats of diverse origin
Mares, D., Mrva, K., Cheong, J., Williams, K., Watson, B., Storlie, E., Sutherland, M. and Zou, Y.. 2005. "A QTL located on chromosome 4A associated with dormancy in white- and red-grained wheats of diverse origin." Theoretical and Applied Genetics: international journal of plant breeding research. 111 (7), pp. 1357-1364. https://doi.org/10.1007/s00122-005-0065-5
Molecular characterization of a Triticum timopheevii introgression in a Wentworth/Lang population
Lehmensiek, A., Bovill, W. D., Banks, P. M. and Sutherland, M. W.. 2008. "Molecular characterization of a Triticum timopheevii introgression in a Wentworth/Lang population." Appels, Rudi (ed.) 11th International Wheat Genetics Symposium 2008 (IWGS 2008). Brisbane, Australia 24 - 29 Aug 2008 Sydney, Australia.
Progress in comparing fusarium pseudograminearum infection levels and crown rot symptoms in stem internodes of cereals
Petrisko, J. E., Knight, N. and Sutherland, M. W.. 2010. "Progress in comparing fusarium pseudograminearum infection levels and crown rot symptoms in stem internodes of cereals." Stirling, Graham R. (ed.) ASDS 2010: 6th Australasian Soilborne Diseases Symposium. Twin Waters, Australia 09 - 11 Aug 2010 Australia.
Infection of wheat tissues by fusarium pseudograminearum
Knight, N. L., Percy, C., Lehmensiek, A., Herde, D. J. and Sutherland, M. W.. 2008. "Infection of wheat tissues by fusarium pseudograminearum." Appels, Rudi (ed.) 11th International Wheat Genetics Symposium 2008 (IWGS 2008). Brisbane, Australia 24 - 29 Aug 2008 Sydney, Australia.
Identification of multiple root disease resistant wheat germplasm against cereal nematodes and dryland root rot and their validation in regions of economic importance
Nicol, J. M., Sahin, E., Wallwork, H., Chakraborty, S., Lu, M., O'Brien, L., Sutherland, M., Horne, M., Simpfendorfer, S., Herde, D., Ogbonnaya, F., Duvellier, E., Bolat, N., Yahyaoui, A., Buerstmayr, H., Lewis, J., Crossa, J., Singh, A. K., Bishnoi, S. P., ..., Gargouri, S.. 2008. "Identification of multiple root disease resistant wheat germplasm against cereal nematodes and dryland root rot and their validation in regions of economic importance." Appels, Rudi (ed.) 11th International Wheat Genetics Symposium 2008 (IWGS 2008). Brisbane, Australia 24 - 29 Aug 2008 Sydney, Australia.
Mapping spot blotch resistance genes in four barley populations
Bovill, Jessica, Lehmensiek, Anke, Sutherland, Mark W., Platz, Greg. J., Usher, Terry, Franckowiak, Jerome and Mace, Emma. 2010. "Mapping spot blotch resistance genes in four barley populations." Molecular Breeding: new strategies in plant improvement. 26 (4), pp. 653-666. https://doi.org/10.1007/s11032-010-9401-9
Chromosome composition of an F2 Triticum aestivum × T. turgidum spp. durum cross analysed by DArT markers and MCFISH
Eberhard, Friederike S., Zhang, Peng, Lehmensiek, Anke, Hare, Ray A., Simpfendorfer, Steven and Sutherland, Mark W.. 2010. "Chromosome composition of an F2 Triticum aestivum × T. turgidum spp. durum cross analysed by DArT markers and MCFISH." Crop and Pasture Science. 61 (8), pp. 619-624. https://doi.org/10.1071/CP10131
An investigation of genetic variation among Australian isolates of Bipolaris sorokiniana from different cereal tissues and comparison of their abilities to cause spot blotch on barley
Knight, N. L., Platz, G. J., Lehmensiek, A. and Sutherland, M. W.. 2010. "An investigation of genetic variation among Australian isolates of Bipolaris sorokiniana from different cereal tissues and comparison of their abilities to cause spot blotch on barley." Australasian Plant Pathology. 39 (3), pp. 207-216. https://doi.org/10.1071/AP09082
Genomic regions associated with common root rot resistance in the barley variety Delta
Lehmensiek, A., Bovill, J., Sutherland, M. W. and McNamara, R. B.. 2010. "Genomic regions associated with common root rot resistance in the barley variety Delta." Australasian Plant Pathology. 39 (3), pp. 241-246. https://doi.org/10.1071/AP09089
Population structure of South African and Australian Pyrenophora teres isolates
Lehmensiek, A., Bester-van der Merwe, A. E., Sutherland, M. W., Platz, G., Kriel, W. M., Potgieter, G. F. and Prins, R.. 2010. "Population structure of South African and Australian Pyrenophora teres isolates." Plant Pathology. 59 (3), pp. 504-515. https://doi.org/10.1111/j.1365-3059.2009.02231.x
Pyramiding QTL increases seedling resistance to crown rot (Fusarium pseudograminearum) of wheat (Triticum aestivum)
Bovill, W. D., Horne, M., Herde, D., Davis, M., Wildermuth, G. B. and Sutherland, M. W.. 2010. "Pyramiding QTL increases seedling resistance to crown rot (Fusarium pseudograminearum) of wheat (Triticum aestivum)." Theoretical and Applied Genetics: international journal of plant breeding research. 121 (1), pp. 127-136. https://doi.org/10.1007/s00122-010-1296-7
The generation of oxygen radicals during host plant responses to infection
Sutherland, Mark W.. 1991. "The generation of oxygen radicals during host plant responses to infection." Physiological and Molecular Plant Pathology. 39 (1), pp. 71-93.
Genes involved in hypersensitive cell death responses during fusarium crown rot infection in wheat
Petrisko, Jill E., Sutherland, Mark W. and Windes, Juliet M.. 2009. "Genes involved in hypersensitive cell death responses during fusarium crown rot infection in wheat." Guest, David (ed.) 17th Biennial Australasian Plant Pathology Society Conference (APPS 2009): Plant Health Management: An Integrated Approach. Newcastle, Australia 29 Sep - 01 Oct 2009 Toowoomba, Australia.
Bipolaris sorokiniana resistance loci identified on chromosomes 3HS and 7HS in three related barley
Sutherland, M. W., Lehmensiek, A., Leist, C., Platz, G. and Usher, T. R.. 2009. "Bipolaris sorokiniana resistance loci identified on chromosomes 3HS and 7HS in three related barley." Poulsen, David (ed.) ABTS 2009: Barley - The Grain for Gain. Sunshine Coast, Australia 13 - 16 Sep 2009 Indooroopilly, Australia.
Chromosome composition in an F2 hexaploid x durum cross analysed by DArT markers and MCFISH
Eberhard, F. S., Zhang, P., Lehmensiek, A., Sutherland, M. W., Hare, R. and Simpfendorfer, S.. 2008. "Chromosome composition in an F2 hexaploid x durum cross analysed by DArT markers and MCFISH." Appels, Rudi, Eastwood, Russell, Lagudah, Evans, Mackay, Michael, McIntyre, Lynne, Sharp, Peter and Langridge, Peter (ed.) 11th International Wheat Genetics Sympoium (IWGS 2008). Brisbane, Australia 24 - 29 Aug 2008 Sydney, Australia.
The application of molecular markers for partial resistance against fusarium crown rot in hexaploid and tetraploid wheats
Sutherland, Mark, Bovill, W. D., Horne, M., Lehmensiek, A., Eberhard, F., Percy, C., Wildermuth, G. B., Simpfendorfer, S. and Hare, R.. 2008. "The application of molecular markers for partial resistance against fusarium crown rot in hexaploid and tetraploid wheats." 10th International Fusarium and Fusarium Genomics Workshop 2008. Sardinia, Italy 30 Aug - 02 Sep 2008 Sardinia,Italy.
Segregation of glutenins in wheatxmaize-derived doubled haploid wheat populations
Kammholz, Stephen J., Grams, Raechelle A., Banks, Phillip and Sutherland, Mark W.. 1998. "Segregation of glutenins in wheatxmaize-derived doubled haploid wheat populations." Australian Journal of Agricultural Research. 49 (8), pp. 1253-1259. https://doi.org/10.1071/A98032
Use of a new tetrazolium-based assay to study the production of superoxide radicals by tobacco cell cultures challenged with avirulent zoospores of Phytopthora parasitica var nicotianae
Able, Amanda J., Guest, David I. and Sutherland, Mark W.. 1998. "Use of a new tetrazolium-based assay to study the production of superoxide radicals by tobacco cell cultures challenged with avirulent zoospores of Phytopthora parasitica var nicotianae." Plant Physiology. 117 (2), pp. 491-499.
The tetrazolium dyes MTS and XTT provide new quantitative assays for superoxide and superoxide dismutase
Sutherland, Mark W. and Learmonth, Barbara A.. 1997. "The tetrazolium dyes MTS and XTT provide new quantitative assays for superoxide and superoxide dismutase." Free Radical Research. 27 (3), pp. 283-289. https://doi.org/10.3109/10715769709065766
Improving the efficiency of haploid wheat production mediated by wide crossing
Kammholz, Stephen J., Sutherland, Mark W. and Banks, Phillip. 1996. "Improving the efficiency of haploid wheat production mediated by wide crossing." Sabrao Journal. 28, pp. 37-46.
Hydrogen peroxide yields during the incompatible interaction of tobacco suspension cells inoculated with Phytophthora nicotiannae
Able, Amanda J., Guest, David I. and Sutherland, Mark W.. 2000. "Hydrogen peroxide yields during the incompatible interaction of tobacco suspension cells inoculated with Phytophthora nicotiannae." Plant Physiology. 124 (2), pp. 899-910.
Relationship between transembrane ion movements, production of reactive oxygen species and the hypersensitive response during the challenge of tobacco suspension cells by zoospores of Phytophthora nicotianae
Able, Amanda J., Guest, David I. and Sutherland, Mark W.. 2001. "Relationship between transembrane ion movements, production of reactive oxygen species and the hypersensitive response during the challenge of tobacco suspension cells by zoospores of Phytophthora nicotianae." Physiological and Molecular Plant Pathology. 58 (5), pp. 189-198. https://doi.org/10.1006/pmpp.2001.0328
High and low pre-inoculation temperatures decrease the effectiveness of the Lr20 and Sr15 rust resistance genes in wheat
Ramage, R. A and Sutherland, Mark W.. 1995. "High and low pre-inoculation temperatures decrease the effectiveness of the Lr20 and Sr15 rust resistance genes in wheat." Plant Pathology. 44 (5), pp. 772-778. https://doi.org/10.1111/j.1365-3059.1995.tb02734.x
Effect of the puroindoline locus and environment on Chinese fresh noodle texture
Storlie, E., Yang, E. N., Zou, Y. C., Chen, D. S., Sheppard, J., Martin, D., Huang, S., Mares, D. and Sutherland, M. W.. 2006. "Effect of the puroindoline locus and environment on Chinese fresh noodle texture." Australian Journal of Agricultural Research. 57 (5), pp. 537-542. https://doi.org/10.1071/AR05248
Mapping QTLs for polyphenol oxidase activity in a DH population from common wheat
Zhang, Li-Ping, Ge, Xiu-Xiu, He, Zhong-Hu, Wang, De-Sen, Yan, Jun, Xia, Xian-Chun and Sutherland, Mark W.. 2005. "Mapping QTLs for polyphenol oxidase activity in a DH population from common wheat." Zuowu Xuebao. 31 (1), pp. 7-10.
Biological methods: a novel course in undergraduate biology
Kotiw, Michael, Learmonth, Robert P. and Sutherland, Mark W.. 1999. "Biological methods: a novel course in undergraduate biology." Biochemical Education. 27 (3), pp. 131-134. https://doi.org/10.1016/S0307-4412(99)00002-3
Mapping markers for priority traits in the northern grains region of Australia
Mace, E., Sutherland, Mark, Lehmensiek, Anke, Bovill, Bill, Bovill, Jessica, Collard, Bert, Daggard, Grant and Christopher, M. J.. 2006. "Mapping markers for priority traits in the northern grains region of Australia." ITMI Workshop and ACPFG Genomics Symposium (2006). Victor Harbour, Australia 27 - 31 Aug 2006
Genetic control of dormancy in white-grained wheats of diverse origin
Mares, Daryl, Mrva, Kolumbina, Cheong, Judy, Williams, Kevin, Cavallaro, Benedette, Storlie, Eric, Sutherland, Mark and Zou, Y.. 2004. "Genetic control of dormancy in white-grained wheats of diverse origin." Black, C. K., Panozzo, J. F. and Rebetzke, G. J. (ed.) 54th Australian Cereal Chemistry Conference (CEREALS 2004). Canberra, Australia 21 - 24 Sep 2004 Melbourne, Australia.
Establishment and characterisation of wheat genetic mapping populations
Kammholz, S. J., Campbell, A. W., Sutherland, M. W., Hollamby, G. J., Martin, P. J., Eastwood, R. F., Barclay, I., Wilson, R. E., Brennan, P. S. and Sheppard, J. A.. 2001. "Establishment and characterisation of wheat genetic mapping populations ." Australian Journal of Agricultural Research. 52 (11/12), pp. 1079-1088. https://doi.org/10.1071/AR01043
Identification of novel QTL for resistance to crown rot in the doubled haploid wheat population 'W21MMT70' x 'Mendos'
Bovill, W. D., Ma, W., Ritter, K., Collard, B. C. Y., Davis, M., Wildermuth, G. B. and Sutherland, M. W.. 2006. "Identification of novel QTL for resistance to crown rot in the doubled haploid wheat population 'W21MMT70' x 'Mendos' ." Plant Breeding. 125 (6), pp. 538-543. https://doi.org/10.1111/j.1439-0523.2006.01251.x
Confirmation of QTL mapping and marker validation for partial seedling resistance to crown rot in wheat line '2-49'
Collard, B. C. Y., Jolley, R., Bovill, W. D., Grams, R. A., Wildermuth, G. B. and Sutherland, M. W.. 2006. "Confirmation of QTL mapping and marker validation for partial seedling resistance to crown rot in wheat line '2-49'." Australian Journal of Agricultural Research. 57 (9), pp. 967-973. https://doi.org/10.1071/AR05419
Effectiveness of partial resistance sources in hexaploid wheats against fusarium pseudograminearum isolates
Percy, C. D., Wildermuth, G. B. and Sutherland, Mark W.. 2005. "Effectiveness of partial resistance sources in hexaploid wheats against fusarium pseudograminearum isolates." Cahill, David (ed.) 15th Biennial Australasian Plant Pathology Society Conference. Geelong, Australia 26 - 29 Sep 2005 Geelong, Australia.
Strategies for fine mapping QTLs for crown rot resistance in wheats
Bovill, W. D., Collard, B. C. Y., Lehmensiek, Anke, Wildermuth, G. B. and Sutherland, Mark W.. 2005. "Strategies for fine mapping QTLs for crown rot resistance in wheats." Cahill, David (ed.) 15th Biennial Australasian Plant Pathology Society Conference. Geelong, Australia 26 - 29 Sep 2005 Geelong.