Translational genomics for achieving higher genetic gains in groundnut

Article


Pandey, Manish K., Pandey, Arun K., Kumar, Rakesh, Nwosu, Chogozie Victor, Guo, Baozhu, Wright, Graeme C., Bhat, Ramesh S., Chen, Xiaoping, Bera, Sandip K., Yuan, Mei, Jiang, Huifang, Faye, Issa, Radhakrishnan, Thankappan, Wang, Xingjun, Liang, Xuanquiang, Liao, Boshou, Zhang, Xinyou, Varshney, Rajeev K. and Zhuang, Weijian. 2020. "Translational genomics for achieving higher genetic gains in groundnut." Theoretical and Applied Genetics: international journal of plant breeding research. 133, pp. 1679-1702. https://doi.org/10.1007/s00122-020-03592-2
Article Title

Translational genomics for achieving higher genetic gains in groundnut

ERA Journal ID2411
Article CategoryArticle
AuthorsPandey, Manish K. (Author), Pandey, Arun K. (Author), Kumar, Rakesh (Author), Nwosu, Chogozie Victor (Author), Guo, Baozhu (Author), Wright, Graeme C. (Author), Bhat, Ramesh S. (Author), Chen, Xiaoping (Author), Bera, Sandip K. (Author), Yuan, Mei (Author), Jiang, Huifang (Author), Faye, Issa (Author), Radhakrishnan, Thankappan (Author), Wang, Xingjun (Author), Liang, Xuanquiang (Author), Liao, Boshou (Author), Zhang, Xinyou (Author), Varshney, Rajeev K. (Author) and Zhuang, Weijian (Author)
Journal TitleTheoretical and Applied Genetics: international journal of plant breeding research
Journal Citation133, pp. 1679-1702
Number of Pages24
Year2020
PublisherSpringer
Place of PublicationGermany
ISSN0040-5752
1432-2242
Digital Object Identifier (DOI)https://doi.org/10.1007/s00122-020-03592-2
Web Address (URL)https://link.springer.com/article/10.1007/s00122-020-03592-2
Abstract

Cultivated groundnut or peanut (Arachis hypogaea), an allopolyploid oilseed crop with a large and complex genome, is one of the most nutritious food. This crop is grown in more than 100 countries, and the low productivity has remained the biggest challenge in the semiarid tropics. Recently, the groundnut research community has witnessed fast progress and achieved several key milestones in genomics research including genome sequence assemblies of wild diploid progenitors, wild tetraploid and both the subspecies of cultivated tetraploids, resequencing of diverse germplasm lines, genome-wide transcriptome atlas and cost-effective high and low-density genotyping assays. These genomic resources have enabled high-resolution trait mapping by using germplasm diversity panels and multi-parent genetic populations leading to precise gene discovery and diagnostic marker development. Furthermore, development and deployment of diagnostic markers have facilitated screening early generation populations as well as marker-assisted backcrossing breeding leading to development and commercialization of some molecular breeding products in groundnut. Several new genomics applications/technologies such as genomic selection, speed breeding, mid-density genotyping assay and genome editing are in pipeline. The integration of these new technologies hold great promise for developing climate-smart, high yielding and more nutritious groundnut varieties in the post-genome era.

KeywordsCultivated tetraploid; Diagnostic markers; Genetic improvements; Genetic population; Genetic resources; Genotyping assays; Molecular breeding; Research communities
ANZSRC Field of Research 2020300404. Crop and pasture biochemistry and physiology
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Institution of OriginUniversity of Southern Queensland
Byline AffiliationsUniversity of Southern Queensland
International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), India
Mars Wrigley, United States
Department of Agriculture, United States
Peanut Company of Australia, Australia
University of Agricultural Sciences Bangalore, India
Guangdong Academy of Agricultural Sciences, China
Central Plantation Crops Research Institute, India
Shandong Peanut Research Institute, China
Chinese Academy of Agricultural Sciences, China
Senegalese Institute for Agronomic Research, Senegal
Fujian Agriculture and Forestry University, China
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