Institute for Life Sciences and the Environment
| Type | School/Centre |
|---|---|
| Director of Research | Prof Gavin Ash |
| Parent | Institute for Life Sciences and the Environment |
| Head | Prof Gavin Ash |
Latest research outputs
399 results found
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Phenotypic and genotypic diversity of Puccinia sorghi in Eastern Australia: implications for maize breeding programs
Quade, Aurelie, Park, Robert F., Stodart, Benjamin, Ding, Yi, Zhang, Peng, Thang, Mike, Poudel, Barsha, Vaghefi, Niloofar and Ash, Gavin James. 2023. "Phenotypic and genotypic diversity of Puccinia sorghi in Eastern Australia: implications for maize breeding programs ." PhytoFrontiers. 3 (3), pp. 610-618. https://doi.org/10.1094/PHYTOFR-12-22-0151-RArticle
Factors affecting the occupancy of Chinese pangolins (Manis pentadactyla) suggest a highly specialized ecological niche
Dhami, Bijaya, Neupane, Bijaya, Devkota, Bishnu Prasad, Maraseni, Tek, Sadadev, Bipana Maiya, Bista, Shreyashi, Adhikari, Amit, Chhetri, Nar Bahadur, Panta, Melina and Stewart, Alyssa B.. 2023. "Factors affecting the occupancy of Chinese pangolins (Manis pentadactyla) suggest a highly specialized ecological niche." Ecosphere. 14 (1). https://doi.org/10.1002/ecs2.4356Article
Efficacy of Management Efforts to Reduce Food-Related Dingo–Human Interactions and Conflict on K’gari (Fraser Island), Australia
Behrendorff, Linda, King, Rachel and Allen, Benjamin. 2023. "Efficacy of Management Efforts to Reduce Food-Related Dingo–Human Interactions and Conflict on K’gari (Fraser Island), Australia." Animals. 13 (2). https://doi.org/10.3390/ani13020204Article
Deep learning U-Net classification of Sentinel-1 and 2 fusions effectively demarcates tropical montane forest's deforestation
Altarez, Richard Dein D., Apan, Armando and Maraseni, Tek. 2023. "Deep learning U-Net classification of Sentinel-1 and 2 fusions effectively demarcates tropical montane forest's deforestation." Remote Sensing Applications: Society and Environment. 29. https://doi.org/10.1016/j.rsase.2022.100887Article
Modelling Floodplain Vegetation Response to Groundwater Variability Using the ArcSWAT Hydrological Model, MODIS NDVI Data, and Machine Learning
Muhury, Newton, Apan, Armando A., Maraseni, Tek N. and Ayele, Gebiaw T.. 2022. "Modelling Floodplain Vegetation Response to Groundwater Variability Using the ArcSWAT Hydrological Model, MODIS NDVI Data, and Machine Learning." Land. 11 (12), pp. 1-23. https://doi.org/10.3390/land11122154Article
IMA Genome - F16 Draft genome assemblies of Fusarium marasasianum, Huntiella abstrusa, two Immersiporthe knoxdaviesiana isolates, Macrophomina pseudophaseolina, Macrophomina phaseolina, Naganishia randhawae, and Pseudocercospora cruenta
Wingfield, Brenda D., De Vos, Lieschen, Wilson, Andi M., Duong, Tuan A., Vaghefi, Niloofar, Botes, Angela, Kharwar, Ravindra Nath, Chand, Ramesh, Poudel, Barsha, Aliyu, Habibu, Barbetti, Martin J., Chen, ShuaiFei, de Maayer, Pieter, Liu, FeiFei, Navathe, Sudhir, Sinha, Shagun, Steenkamp, Emma T., Suzuki, Hiroyuki, Tshisekedi, Kalonji A., ..., Wingfield, Michael J.. 2022. "IMA Genome - F16 Draft genome assemblies of Fusarium marasasianum, Huntiella abstrusa, two Immersiporthe knoxdaviesiana isolates, Macrophomina pseudophaseolina, Macrophomina phaseolina, Naganishia randhawae, and Pseudocercospora cruenta." IMA Fungus: the global mycological journal. 13 (1), pp. 1-22. https://doi.org/10.1186/s43008-022-00089-zArticle
Winter Cereal Reactions to Common Root Rot and Crown Rot Pathogens in the Field
Saad, Ahmed, Macdonald, Bethany, Martin, Anke, Knight, Noel L. and Percy, Cassandra. 2022. "Winter Cereal Reactions to Common Root Rot and Crown Rot Pathogens in the Field." Agronomy. 12 (10), pp. 1-18. https://doi.org/10.3390/agronomy12102571Article
Fungal Planet description sheets: 1383–1435
Crous, P. W., Boers, J., Holdom, D., Osieck, E. R., Steinrucken, T. V., Tan, Y. P., Vitelli, J. S., Shivas, R. G., Barrett, M., Broadbridge, J., Larsson, E., Lebel, T., Pinruan, U., Sommai, S., Alvarado, P., Bonito, G., Decock, C. A., De la Pena-Lastra, S., Delgado, G., ..., Groenewald, J. Z.. 2022. "Fungal Planet description sheets: 1383–1435." Persoonia. 48, pp. 1-153. https://doi.org/10.3767/persoonia.2022.48.08Article
Novel nested patch-based feature extraction model for automated Parkinson’s Disease symptom classification using MRI images
Kaplan, Ela, Altunisik, Erman, Firat, Yasemin Ekmekyapar, Barua, Prabal Datta, Dogan, Sengul, Baygin, Mehmet, Demir, Fahrettin Burak, Tuncer, Turker, Palmer, Elizabeth, Tan, Ru-San, Yu, Ping, Soar, Jeffrey, Fujita, Hamido and Acharya, U. Rajendra. 2022. "Novel nested patch-based feature extraction model for automated Parkinson’s Disease symptom classification using MRI images." Computer Methods and Programs in Biomedicine. 224, pp. 1-11. https://doi.org/10.1016/j.cmpb.2022.107030Article
Resporulation of Metarhizium anisopliae granules on soil and mortality of Tenebrio molitor: Implications for wireworm management in sweetpotato
Shah, Sudhan, Ash, Gavin J. and Wilson, Bree A. L.. 2023. "Resporulation of Metarhizium anisopliae granules on soil and mortality of Tenebrio molitor: Implications for wireworm management in sweetpotato." Annals of Applied Biology. 182 (1), pp. 65-76. https://doi.org/10.1111/aab.12797Article
Resistance to root-lesion nematode Pratylenchus neglectus identified in a new collection of two wild chickpea species (Cicer reticulatum and C. echinospermum) from Turkey
Rostad, Hannah E., Reen, Roslyn A., Mumford, Michael H., Zwart, Rebecca S. and Thompson, John P.. 2022. "Resistance to root-lesion nematode Pratylenchus neglectus identified in a new collection of two wild chickpea species (Cicer reticulatum and C. echinospermum) from Turkey." Plant Pathology. 71 (5), pp. 1205-1219. https://doi.org/10.1111/ppa.13544Article
Incorporating solution alkalinity into a hydraulic reduction model to account for disaggregation and dispersion
Ali, Aram, Bennett, John McL., Biggs, Andrew J. W. and Marchuk, Alla. 2022. "Incorporating solution alkalinity into a hydraulic reduction model to account for disaggregation and dispersion." Geoderma. 413, pp. 1-11. https://doi.org/10.1016/j.geoderma.2022.115742Article
Summer crop disease breakthroughs
Kelly, Lisa, Owen, Kirsty, Sharman, Murray, Vukovic, Peter and Adorada, Dante L.. 2021. "Summer crop disease breakthroughs." GroundCover.Article
Can bacterial plant pathogens be written off from grain discolourations observed on rice in northern Queensland?
Buyoyu, Peter, Weeraratne, Nirodha, Adorada, Dante L. and Ash, Gavin J.. 2019. "Can bacterial plant pathogens be written off from grain discolourations observed on rice in northern Queensland?" 22nd Biennial Australasian Plant Pathology Society Conference (APPS 2019): Strong Foundations, Future Innovations. Melbourne, Australia 25 - 28 Nov 2019 Australia.Poster
Botryosphaeriaceae in Australian cereal grains: An overview
Adorada, Dante L.. 2017. "Botryosphaeriaceae in Australian cereal grains: An overview." Science Protecting Plant Health Conference (2017). Brisbane, Australia 25 Aug 2017 Australia.Presentation
Final Report Project 39: Root Diseases of Sesame in Australia
Adorada, Dante. 2021. Final Report Project 39: Root Diseases of Sesame in Australia. Australia. University of Southern Queensland.Project report
Final Report: Soilborne Pathogens of Sesame
Adorada, Dante L.. 2021. Final Report: Soilborne Pathogens of Sesame. Australia. University of Southern Queensland.Project report
Integrated disease management tools to manage summer crop diseases in the northern region
Adorada, Dante L. and Ryan, Juanita. 2020. Integrated disease management tools to manage summer crop diseases in the northern region. Australia. Grains Research and Development Corporation.Technical report
Extent, distribution and cause of peanut kernel shrivel (PKS) syndrome in the Bundaberg and Northern Queensland regions
Adorada, Dante L. and Neary, Liz. 2018. Extent, distribution and cause of peanut kernel shrivel (PKS) syndrome in the Bundaberg and Northern Queensland regions. Australia. Grains Research and Development Corporation.Technical report
The First Annotated Genome Assembly of Macrophomina tecta Associated with Charcoal Rot of Sorghum
Poudel, Barsha, Purushotham, Neeraj, Jones, Ashley, Nasim, Jamila, Adorada, Dante L., Sparks, Adam H., Schwessinger, Benjamin and Vaghefi, Niloofar. 2022. "The First Annotated Genome Assembly of Macrophomina tecta Associated with Charcoal Rot of Sorghum." Genome Biology and Evolution. 14 (6), pp. 1-7. https://doi.org/10.1093/gbe/evac081Article
Automated variety trial plot growth and flowering detection for maize and soybean using machine vision
McCarthy, Alison and Raine, Steven. 2022. "Automated variety trial plot growth and flowering detection for maize and soybean using machine vision." Computers and Electronics in Agriculture. 194, pp. 1-21. https://doi.org/10.1016/j.compag.2022.106727Article
First Report of Powdery Mildew Caused by Erysiphe cruciferarum on Brassica campestris var. pekinensis, B. carinata, Eruca sativa, E. vesicaria in Australia and on B. rapa and B. oleracea var. capitata in Western Australia
Gunasinghe, Niroshini, You, M. P., Lanoiselet, V., Eyres, N. and Barbetti, M. J.. 2013. "First Report of Powdery Mildew Caused by Erysiphe cruciferarum on Brassica campestris var. pekinensis, B. carinata, Eruca sativa, E. vesicaria in Australia and on B. rapa and B. oleracea var. capitata in Western Australia." Plant Disease: an international journal of applied plant pathology. 97 (9), pp. 1256-1256. https://doi.org/10.1094/PDIS-03-13-0299-PDNArticle
The impact of clay dispersion and migration on soil hydraulic conductivity and pore networks
Awedat, Awedat Musbah, Zhu, Yingcan, Bennett, John McLean and Raine, Steven R.. 2021. "The impact of clay dispersion and migration on soil hydraulic conductivity and pore networks." Geoderma. 404, pp. 1-12. https://doi.org/10.1016/j.geoderma.2021.115297Article
Resistance in maize (Zea mays) to isolates of Puccinia sorghi from Eastern Australia
Quade, Aurelie, Ash, Gavin J., Park, Robert F. and Stodart, Benjamin. 2021. "Resistance in maize (Zea mays) to isolates of Puccinia sorghi from Eastern Australia." Phytopathology: International Journal of the American Phytopathological Society. 111 (10), pp. 1751-1757. https://doi.org/10.1094/PHYTO-11-20-0524-RArticle
Site-specific, genotypic and temporal variation in photosynthesis and its related biochemistry in wheat (Triticum aestivum)
Dehigaspitiya, Prabuddha, Milham, Paul, Martin, Anke, Ash, Gavin, Gamage, Dananjali, Holford, Paul and Seneweera, Saman. 2021. "Site-specific, genotypic and temporal variation in photosynthesis and its related biochemistry in wheat (Triticum aestivum)." Functional Plant Biology: an international journal of plant function. 49 (2), pp. 115-131. https://doi.org/10.1071/FP21111Article
Whole-Genome Data from Curtobacterium flaccumfaciens pv. flaccumfaciens Strains Associated with Tan Spot of Mungbean and Soybean Reveal Diverse Plasmid Profiles
Vaghefi, Niloofar, Adorada, Dante L., Huth, Lauren, Kelly, Lisa A., Poudel, Barsha, Young, Anthony and Sparks, Adam H.. 2021. "Whole-Genome Data from Curtobacterium flaccumfaciens pv. flaccumfaciens Strains Associated with Tan Spot of Mungbean and Soybean Reveal Diverse Plasmid Profiles." Molecular Plant-Microbe Interactions. 34 (10), pp. 1216-1222. https://doi.org/10.1094/MPMI-05-21-0116-AArticle
Genetic biofortification of wheat with zinc: Opportunities to fine-tune zinc uptake, transport and grain loading
Kamaral, Chandima, Neate, Stephen M., Gunasinghe, Niroshini, Milham, Paul J., Paterson, David J., Kopittke, Peter M. and Seneweera, Saman. 2021. "Genetic biofortification of wheat with zinc: Opportunities to fine-tune zinc uptake, transport and grain loading." Physiologia Plantarum. 174 (1), pp. 1-18. https://doi.org/10.1111/ppl.13612Article
Dimorphism in Neopseudocercosporella capsellae, an Emerging Pathogen Causing White Leaf Spot Disease of Brassicas
Gunasinghe, Niroshini, Barbetti, Martin J., You, Ming Pei, Dehigaspitiya, Prabuddha and Neate, Stephen. 2021. "Dimorphism in Neopseudocercosporella capsellae, an Emerging Pathogen Causing White Leaf Spot Disease of Brassicas." Frontiers in Cellular and Infection Microbiology. 11, pp. 1-15. https://doi.org/10.3389/fcimb.2021.678231Article
The use of Pantoea agglomerans and Flavobacterium sp. to control banana pathogens
Gunasinghe, R. Niroshini, Ikiriwatte, Chamari J. and Karunaratne, Anjani M.. 2004. "The use of Pantoea agglomerans and Flavobacterium sp. to control banana pathogens." Journal of Horticultural Science and Biotechnology. 79 (6), pp. 1002-1006. https://doi.org/10.1080/14620316.2004.11511852Article
Interactions of Colletotrichum musae and Lasiodiplodia theobromae and their biocontrol by Pantoea agglomerans and Flavobacterium sp. in expression of crown rot of 'Embul' banana
Gunasinghe, W. K. R. Niroshini and Karunaratne, Anjani M.. 2009. "Interactions of Colletotrichum musae and Lasiodiplodia theobromae and their biocontrol by Pantoea agglomerans and Flavobacterium sp. in expression of crown rot of 'Embul' banana." BioControl: journal of the International Organisation for Biological Control. 54 (4), pp. 587-596. https://doi.org/10.1007/s10526-009-9210-4Article
The “Bipartite” Structure of the First Genome of Ampelomyces quisqualis, a Common Hyperparasite and Biocontrol Agent of Powdery Mildews, May Point to Its Evolutionary Origin from Plant Pathogenic Fungi
Huth, Lauren, Ash, Gavin J., Idnurm, Alexander, Kiss, Levente and Vaghefi, Niloofar. 2021. "The “Bipartite” Structure of the First Genome of Ampelomyces quisqualis, a Common Hyperparasite and Biocontrol Agent of Powdery Mildews, May Point to Its Evolutionary Origin from Plant Pathogenic Fungi." Genome Biology and Evolution. 13 (8), pp. 1-7. https://doi.org/10.1093/gbe/evab182Article
Frequency of compound hot–dry weather extremes has significantly increased in Australia since 1889
Collins, Brian. 2022. "Frequency of compound hot–dry weather extremes has significantly increased in Australia since 1889 ." Journal of Agronomy and Crop Science. 208 (6), pp. 941-955. https://doi.org/10.1111/jac.12545Article
Contribution of climate models and APSIM phenological parameters to uncertainties in spring wheat simulations: application of SUFI-2 algorithm in northeast Australia
Collins, Brian, Najeeb, Ullah, Luo, Qunying and Tan, Daniel K. Y.. 2022. "Contribution of climate models and APSIM phenological parameters to uncertainties in spring wheat simulations: application of SUFI-2 algorithm in northeast Australia." Journal of Agronomy and Crop Science. 208 (2), pp. 225-242. https://doi.org/10.1111/jac.12575Article
Analysis on heat characteristics for summer maize cropping in a semi-arid region
Wang, Zhiwei, Sun, Weiwei, Liu, Xiaoli, Li, Yangyang, Collins, Brian, Ullah, Najeeb and Song, Youhong. 2022. "Analysis on heat characteristics for summer maize cropping in a semi-arid region." Agronomy. 12 (6). https://doi.org/10.3390/agronomy12061435Article
A cross-scale analysis to understand and quantify effects of photosynthetic enhancement on crop growth and yield across environments
Wu, Alex, Brider, Jason, Busch, Florian A., Chen, Min, Chenu, Karine, Clarke, Victoria C., Collins, Brian, Ermakova, Maria, Evans, John R., Farquhar, Graham D., Forster, Britta, Furbank, Robert T., Groszmann, Michael, Hernandez‐Prieto, Miguel A., Long, Benedict M., McLean, Greg, Potgieter, Andries, Price, G. Dean, Sharwood, Robert E., ..., Hammer, Graeme L.. 2022. "A cross-scale analysis to understand and quantify effects of photosynthetic enhancement on crop growth and yield across environments." Plant, Cell and Environment. 46 (1), pp. 23-44. https://doi.org/10.1111/pce.14453Article
The Effect of Past Climate Change on the Water Footprint Trend in Saffron at Homogeneous Agroclimatic Regions of Khorasan
Moshizi, zahra Gerkani Nezhad, Bazrafshan, ommolbanin, Ramezani-Etedali, Hadi, Esmaeilpour, yahya and Collins, Brian. 2022. "The Effect of Past Climate Change on the Water Footprint Trend in Saffron at Homogeneous Agroclimatic Regions of Khorasan ." Journal of Saffron Research. 10 (2), pp. 295-311. https://doi.org/10.22077/JSR.2022.5742.1199Article
Evaluation of CRU TS, GPCC, AgMERRA, and AgCFSR meteorological datasets for estimating climate and crop variables: A case study of maize in Qazvin Province, Iran
Paveh, Faraz Gorgin, Ramezani-Etedali, Hadi and Collins, Brian. 2022. "Evaluation of CRU TS, GPCC, AgMERRA, and AgCFSR meteorological datasets for estimating climate and crop variables: A case study of maize in Qazvin Province, Iran." Journal of Arid Land. 14 (12), pp. 1361-1376. https://doi.org/10.1007/s40333-022-0108-7Article
IMA genome‑F17: Draft genome sequences of an Armillaria species from Zimbabwe, Ceratocystis colombiana, Elsinoë necatrix, Rosellinia necatrix, two genomes of Sclerotinia minor, short‑read genome assemblies and annotations of four Pyrenophora teres isolates from barley grass, and a long-read genome assembly of Cercospora zeina
Wingfield, Brenda D., Berger, Dave K., Coetzee, Martin P. A., Duong, Tuan A., Martin, Anke, Pham, Nam Q., van denBerg, Noelani, Wilken, P. Markus, Arun‑Chinnappa, Kiruba Shankari., Barnes, Irene, Buthelezi, Sikelela, Dahanayaka, Buddhika Amarasinghe, Durán, Alvaro, Engelbrecht, Juanita, Feurtey, Alice, Fourie, Arista, Fourie, Gerda, Hartley, Jesse, Kabwe, Eugene N. K., ..., Wingfield, Michael J.. 2022. "IMA genome‑F17: Draft genome sequences of an Armillaria species from Zimbabwe, Ceratocystis colombiana, Elsinoë necatrix, Rosellinia necatrix, two genomes of Sclerotinia minor, short‑read genome assemblies and annotations of four Pyrenophora teres isolates from barley grass, and a long-read genome assembly of Cercospora zeina ." IMA Fungus: the global mycological journal. 13 (1). https://doi.org/10.1186/s43008-022-00104-3Article
Do regenerative grazing management practices improve vegetation and soil health in grazed rangelands? Preliminary insights from a space-for-time study in the Great Barrier Reef catchments, Australia
Bartley, Rebecca, Abbott, Brett N., Ghahramani, Afshin, Ali, Aram, Kerr, Rod, Roth, Christian H. and Kinsey-Henderson, Anne. 2022. "Do regenerative grazing management practices improve vegetation and soil health in grazed rangelands? Preliminary insights from a space-for-time study in the Great Barrier Reef catchments, Australia." The Rangeland Journal. 44 (4), pp. 221-246. https://doi.org/10.1071/RJ22047Article
An artificial neural network-hydrodynamic coupled modeling approach to assess the impacts of floods under changing climate in the East Rapti Watershed, Nepal
Bhattarai, Roshika, Bhattarai, Utsav, Pandey, Vishnu Prasad and Bhattarai, Pawan Kumar. 2022. "An artificial neural network-hydrodynamic coupled modeling approach to assess the impacts of floods under changing climate in the East Rapti Watershed, Nepal." Journal of Flood Risk Management. 15 (4). https://doi.org/10.1111/jfr3.12852Article
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