Centre for Crop Health (Research)


Latest research outputs

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Australia: A Continent Without Native Powdery Mildews? The First Comprehensive Catalog Indicates Recent Introductions and Multiple Host Range Expansion Events, and Leads to the Re-discovery of Salmonomyces as a New Lineage of the Erysiphales
Kiss, Levente, Vaghefi, Niloofar, Bransgrove, Kaylene, Dearnaley, John D. W., Takamatsu, Susumu, Tan, Yu Pei, Marston, Craig, Liu, Shu-Yan, Jin, Dan-Ni, Adorada, Dante L., Bailey, Jordan, Cabrera de Alvarez, Maria Graciela, Daly, Andrew, Dirchwolf, Pamela Maia, Jones, Lynne, Nguyen, Thuan Dat, Edwards, Jacqueline, Ho, Wellcome, Kelly, Lisa, ..., Braun, Uwe. 2020. "Australia: A Continent Without Native Powdery Mildews? The First Comprehensive Catalog Indicates Recent Introductions and Multiple Host Range Expansion Events, and Leads to the Re-discovery of Salmonomyces as a New Lineage of the Erysiphales." Frontiers in Microbiology. 11, pp. 1-31. https://doi.org/10.3389/fmicb.2020.01571

Article

Australian cultures of Botryosphaeriaceae held in Queensland and Victoria plant pathology herbaria revisited
Tan, Yu Pei, Shivas, Roger G., Marney, Thomas S., Edwards, Jacqueline, Dearnaley, John, Jami, Fahimeh and Burgess, Treena I.. 2019. "Australian cultures of Botryosphaeriaceae held in Queensland and Victoria plant pathology herbaria revisited." Australasian Plant Pathology. 48 (1), pp. 25-34. https://doi.org/10.1007/s13313-018-0559-7

Article

Austropleospora osteospermi gen. et sp. nov. and its host specificity and distribution on Chrysanthemoides monilifera ssp. rotundata in Australia
Morin, Louise, Shivas, R. G., Piper, M. C. and Tan, Y. P.. 2010. "Austropleospora osteospermi gen. et sp. nov. and its host specificity and distribution on Chrysanthemoides monilifera ssp. rotundata in Australia ." Fungal Diversity. 40 (1), pp. 65-74. https://doi.org/10.1007/s13225-009-0007-7

Article

Bacteria associated with sheath browning and grain discoloration of rice in East Timor and implications for Australia’s biosecurity
Adorada, Dante L., Stodart, Benjamin J., Tpoi, Roni P., Costa, Severino S. and Ash, Gavin J.. 2013. "Bacteria associated with sheath browning and grain discoloration of rice in East Timor and implications for Australia’s biosecurity." Australasian Plant Disease Notes. 8 (1), pp. 43-47. https://doi.org/10.1007/s13314-013-0092-z

Article

Baobabopsis, a new genus of graminicolous downy mildews from tropical Australia, with an updated key to the genera of downy mildews
Thines, Marco, Telle, Sabine, Choi, Young Joon, Tan, Yu Pei and Shivas, Roger G.. 2015. "Baobabopsis, a new genus of graminicolous downy mildews from tropical Australia, with an updated key to the genera of downy mildews." IMA Fungus: the global mycological journal. 6 (2), pp. 483-491. https://doi.org/10.5598/imafungus.2015.06.02.12

Article

Belowground crop responses to root herbivory are associated with the community structure of native arbuscular mycorrhizal fungi
Ng, Anna, Wilson, Bree A.L. and Frew, Adam. 2023. "Belowground crop responses to root herbivory are associated with the community structure of native arbuscular mycorrhizal fungi." Applied Soil Ecology. 185. https://doi.org/10.1016/j.apsoil.2022.104797

Article

Beyond Nuclear Ribosomal DNA Sequences: Evolution, Taxonomy, and Closest Known Saprobic Relatives of Powdery Mildew Fungi (Erysiphaceae) Inferred From Their First Comprehensive Genome-Scale Phylogenetic Analyses
Vaghefi, Niloofar, Kusch, Stefan, Nemeth, Mark Z., Seress, Diana, Braun, Uwe, Takamatsu, Susumu, Panstruga, Ralph and Kiss, Levente. 2022. "Beyond Nuclear Ribosomal DNA Sequences: Evolution, Taxonomy, and Closest Known Saprobic Relatives of Powdery Mildew Fungi (Erysiphaceae) Inferred From Their First Comprehensive Genome-Scale Phylogenetic Analyses." Frontiers in Microbiology. 13. https://doi.org/10.3389/fmicb.2022.903024

Article

Biodiscovery and the Queensland Plant Pathology Herbarium
Shivas, Roger G., Beasley, Dean R., Bransgrove, Kaylene, Tan, Yu Pei and Bulow, Geoff. 2019. "Biodiscovery and the Queensland Plant Pathology Herbarium." Microbiology Australia. 40 (3), pp. 134-137. https://doi.org/10.1071/MA19036

Article

Bipolaris sorokiniana resistance loci identified on chromosomes 3HS and 7HS in three related barley
Sutherland, M. W., Lehmensiek, A., Leist, C., Platz, G. and Usher, T. R.. 2009. "Bipolaris sorokiniana resistance loci identified on chromosomes 3HS and 7HS in three related barley." Poulsen, David (ed.) ABTS 2009: Barley - The Grain for Gain. Sunshine Coast, Australia 13 - 16 Sep 2009 Indooroopilly, Australia.

Paper

Botryosphaeriaceae in Australian cereal grains: An overview
Adorada, Dante L.. 2017. "Botryosphaeriaceae in Australian cereal grains: An overview." Science Protecting Plant Health Conference (2017). Brisbane, Australia 25 Aug 2017 Australia.

Presentation

Broad and narrow host ranges in resolved species of Cintractia limitata s. lat. (Anthracoideaceae, Ustilaginomycotina) on Cyperus
Kruse, J., McTaggart, A. R., Dhileepan, K., Musili, P. M., Mutie, F. M., Ntandu, J. E., Edogbanya, P. R. O., Chukwuma, E. C. and Shivas, R. G.. 2021. "Broad and narrow host ranges in resolved species of Cintractia limitata s. lat. (Anthracoideaceae, Ustilaginomycotina) on Cyperus." Mycological Progress: international journal of fungal sciences. 20, pp. 191-201. https://doi.org/10.1007/s11557-020-01664-7

Article

Broad host range species in specialised pathogen groups should be treated with suspicion – a case study on Entyloma infecting Ranunculus
Kruse, J., Piatek, M., Lutz, M. and Thines, M.. 2018. "Broad host range species in specialised pathogen groups should be treated with suspicion – a case study on Entyloma infecting Ranunculus." Persoonia. 41, pp. 175-201. https://doi.org/10.3767/persoonia.2018.41.09

Article

Can bacterial plant pathogens be written off from grain discolourations observed on rice in northern Queensland?
Buyoyu, Peter, Weeraratne, Nirodha, Adorada, Dante L. and Ash, Gavin J.. 2019. "Can bacterial plant pathogens be written off from grain discolourations observed on rice in northern Queensland?" 22nd Biennial Australasian Plant Pathology Society Conference (APPS 2019): Strong Foundations, Future Innovations. Melbourne, Australia 25 - 28 Nov 2019 Australia.

Poster

Carpogenic germination of sclerotia of Sclerotinia minor and ascosporic infection of pyrethrum flowers
O'Malley, Thomas B., Hay, Frank S., Scott, Jason B., Gent, David H., Shivas, Roger G. and Pethybridge, Sarah J.. 2015. "Carpogenic germination of sclerotia of Sclerotinia minor and ascosporic infection of pyrethrum flowers." Canadian Journal of Plant Pathology. 37 (2), pp. 179-187. https://doi.org/10.1080/07060661.2015.1036122

Article

Cereal cultivars can be ranked consistently for resistance to root-lesion nematodes (Pratylenchus thornei & P. neglectus) using diverse procedures
Sheedy, J. G., McKay, A. C., Lewis, J., Vanstone, V. A., Fletcher, S., Kelly, A. and Thompson, J. P.. 2015. "Cereal cultivars can be ranked consistently for resistance to root-lesion nematodes (Pratylenchus thornei & P. neglectus) using diverse procedures." Australasian Plant Pathology. 44 (2), pp. 175-182. https://doi.org/10.1007/s13313-014-0333-4

Article

Changes in soil water storage with no-tillage and crop residue retention on a Vertisol: impact on productivity and profitability over a 50 year period
Page, Kathryn L., Dang, Yash P., Dalal, Ram C., Reeves, Steven, Thomas, Greg, Wang, Weijin and Thompson, John P.. 2019. "Changes in soil water storage with no-tillage and crop residue retention on a Vertisol: impact on productivity and profitability over a 50 year period." Soil and Tillage Research. 194, pp. 1-8. https://doi.org/10.1016/j.still.2019.104319

Article

Characterising the genotypic diversity of Curtobacterium flaccumfaciens pv. Flaccumfaciens, the cause of tan spot on mungbean
Vaghefi, Niloofar, Adorada, Dante, Adorada, Encarnacion, Kelly, Lisa, Young, Anthony and Sparks, Adam. 2019. "Characterising the genotypic diversity of Curtobacterium flaccumfaciens pv. Flaccumfaciens, the cause of tan spot on mungbean." 2019 Australian Summer Grains Conference: Enduring Farm Profitability (ASCG 2019). Gold Coast, Australia 08 - 10 Jul 2019

Paper

Characterization of Pyrenophora teres isolates and mapping of virulence genes
Dahanayaka, Buddhika Amarasinghe. 2021. Characterization of Pyrenophora teres isolates and mapping of virulence genes. PhD Thesis Doctor of Philosophy. University of Southern Queensland. https://doi.org/10.26192/q6xw3

PhD Thesis

Characterizing the Saltol quantitative trait locus for salinity tolerance in rice
Thomson, Michael J., de Ocampo, Marjorie, Egdane, James, Rahman, M. Akhlasur, Sajise, Andres Godwin, Adorada, Dante L., Tumimbang-Raiz, Ellen, Blumwald, Eduardo, Seraj, Zeba I., Singh, Rakesh K., Gregorio, Glenn B. and Ismail, Abdelbagi M.. 2010. "Characterizing the Saltol quantitative trait locus for salinity tolerance in rice." Rice. 3 (2-3), pp. 148-160. https://doi.org/10.1007/s12284-010-9053-8

Article

Chromosomal loci associated with endosperm hardness in a malting barley cross
Walker, Cassandra K., Panozzo, J. F., Ford, R., Eckermann, P., Moody, D., Lehmensiek, A. and Appels, R.. 2011. "Chromosomal loci associated with endosperm hardness in a malting barley cross." Theoretical and Applied Genetics: international journal of plant breeding research. 122 (1), pp. 151-162. https://doi.org/10.1007/s00122-010-1431-5

Article

Chromosome composition in an F2 hexaploid x durum cross analysed by DArT markers and MCFISH
Eberhard, F. S., Zhang, P., Lehmensiek, A., Sutherland, M. W., Hare, R. and Simpfendorfer, S.. 2008. "Chromosome composition in an F2 hexaploid x durum cross analysed by DArT markers and MCFISH." Appels, Rudi, Eastwood, Russell, Lagudah, Evans, Mackay, Michael, McIntyre, Lynne, Sharp, Peter and Langridge, Peter (ed.) 11th International Wheat Genetics Sympoium (IWGS 2008). Brisbane, Australia 24 - 29 Aug 2008 Sydney, Australia.

Poster

Chromosome composition of an F2 Triticum aestivum × T. turgidum spp. durum cross analysed by DArT markers and MCFISH
Eberhard, Friederike S., Zhang, Peng, Lehmensiek, Anke, Hare, Ray A., Simpfendorfer, Steven and Sutherland, Mark W.. 2010. "Chromosome composition of an F2 Triticum aestivum × T. turgidum spp. durum cross analysed by DArT markers and MCFISH." Crop and Pasture Science. 61 (8), pp. 619-624. https://doi.org/10.1071/CP10131

Article

Chronic effects and horizontal transmission of Metarhizium anisopliae strain QS155 infection in the sweet potato weevil, Cylas formicarius (Coleoptera: Brentidae)
Dotaona, Ronnie, Wilson, Bree A. L., Stevens, Mark M., Holloway, Joanne and Ash, Gavin J.. 2017. "Chronic effects and horizontal transmission of Metarhizium anisopliae strain QS155 infection in the sweet potato weevil, Cylas formicarius (Coleoptera: Brentidae)." Biological Control. 114, pp. 24-29. https://doi.org/10.1016/j.biocontrol.2017.07.008

Article

Coconut lethal yellowing diseases: a phytoplasma threat to palms of global economic and social significance
Gurr, Geoff M., Johnson, Anne C., Ash, Gavin J., Wilson, Bree A. L., Ero, Mark M., Pilotti, Carmel A., Dewhurst, Charles F. and You, Minsheng S.. 2016. "Coconut lethal yellowing diseases: a phytoplasma threat to palms of global economic and social significance." Frontiers in Plant Science. 7, pp. 1-21. https://doi.org/10.3389/fpls.2016.01521

Article

Colletotrichum siamense, C. theobromicola and C. queenslandicum, from several plant species and the identification of C. asianum in the Northern Territory, Australia
James, R. S., Ray, J., Tan, Y. P. and Shivas, R. G.. 2014. "Colletotrichum siamense, C. theobromicola and C. queenslandicum, from several plant species and the identification of C. asianum in the Northern Territory, Australia." Australasian Plant Disease Notes. 9 (1), pp. 138-138. https://doi.org/10.1007/s13314-014-0138-x

Article

Colletotrichum species associated with pre-and post-harvest diseases of avocado and mango in eastern Australia
Giblin, F. R., Tan, Y. P., Mitchell, R., Coates, L. M., Irwin, J. A. G. and Shivas, R.G.. 2018. "Colletotrichum species associated with pre-and post-harvest diseases of avocado and mango in eastern Australia." Australasian Plant Pathology. 47 (3), pp. 269-276. https://doi.org/10.1007/s13313-018-0553-0

Article

Colletotrichum species in Australia
Shivas, Roger G., Tan, Yu Pei, Edwards, Jacqueline, Dinh, Quang, Maxwell, Aaron, Andjic, Vera, Liberato, José R., Anderson, Chris, Beasley, Dean R., Bransgrove, Kaylene, Coates, Lindy M., Cowan, Karren, Daniel, Rosalie, Dean, Jan R., Lomavatu, Mereia Fong, Mercado-Escueta, Doris, Mitchell, Roger W., Thangavel, Raja, Tran-Nguyen, Lucy T T and Weir, Bevan S.. 2016. "Colletotrichum species in Australia." Australasian Plant Pathology. 45 (5), pp. 447-464. https://doi.org/10.1007/s13313-016-0443-2

Article

Colonization of crop and pasture species with vesicular–arbuscular mycorrhizal fungi and a negative correlation with root infection by Bipolaris sorokiniana
Thompson, J. P. and Wildermuth, G. B.. 1989. "Colonization of crop and pasture species with vesicular–arbuscular mycorrhizal fungi and a negative correlation with root infection by Bipolaris sorokiniana." Canadian Journal of Botany. 67 (3), pp. 687-693. https://doi.org/10.1139/b89-092

Article

Colonization of durum wheat (Triticum turgidum L. var. durum) culms exhibiting premature senescence (dead heads) associated with Fusarium pseudograminearum crown rot
Knight, Noel L., Macdonald, Bethany and Sutherland, Mark W.. 2017. "Colonization of durum wheat (Triticum turgidum L. var. durum) culms exhibiting premature senescence (dead heads) associated with Fusarium pseudograminearum crown rot." Plant Disease: an international journal of applied plant pathology. 101 (10), pp. 1788-1794. https://doi.org/10.1094/PDIS-03-17-0415-RE

Article

Commelinaceomyces, gen. nov., for four clavicipitaceous species misplaced in Ustilago that infect Commelinaceae
Tanaka, Eiji, Shrestha, Bhushan and Shivas, Roger G.. 2020. "Commelinaceomyces, gen. nov., for four clavicipitaceous species misplaced in Ustilago that infect Commelinaceae." Mycologia. 112 (3), pp. 649-660. https://doi.org/10.1080/00275514.2020.1745524

Article

Common QTL and multi-purpose markers for the resistance of five synthetic hexaploids against two species of root lesion nematode
Khoo, Kelvin H. P., Sheedy, Jason, Thompson, John, Hu, Chih-Fang, Vassos, Elysia, Fox, Rebecca, Chalmers, Ken and Mather, Diane E.. 2013. "Common QTL and multi-purpose markers for the resistance of five synthetic hexaploids against two species of root lesion nematode." Wheat Breeding Assembly 2013. Brisbane, Australia 16 - 19 Jul 2013

Presentation

Comparative mycotoxin profiles of Gibberella zeae populations from barley, wheat, potatoes, and sugar beets
Burlakoti, Rishi R., Ali, Shaukat, Secor, Gary A., Neate, Stephen M., McMullen, Marcia P. and Adhikari, Tika B.. 2008. "Comparative mycotoxin profiles of Gibberella zeae populations from barley, wheat, potatoes, and sugar beets ." Applied and Environmental Microbiology. 74 (21), pp. 6513-6520. https://doi.org/10.1128/AEM.01580-08

Article

Comparative Proteomic Analysis of Potato Roots from Resistant and Susceptible Cultivars to Spongospora subterranea Zoospore Root Attachment In Vitro
Yu, Xian, Wilson, Richard, Balotf, Sadegh, Tegg, Robert S., Eyles, Alieta and Wilson, Calum R.. 2022. "Comparative Proteomic Analysis of Potato Roots from Resistant and Susceptible Cultivars to Spongospora subterranea Zoospore Root Attachment In Vitro." Molecules. 27 (18). https://doi.org/10.3390/molecules27186024

Article

Comparative transcriptome analysis of wheat lines in the field reveals multiple essential biochemical pathways suppressed by obligate pathogens
Poretti, Manuel, Sotiropoulos, Alexandros G., Graf, Johannes, Jung, Esther, Bourras, Salim, Krattinger, Simon G. and Wicker, Thomas. 2021. "Comparative transcriptome analysis of wheat lines in the field reveals multiple essential biochemical pathways suppressed by obligate pathogens." Frontiers in Plant Science. 12. https://doi.org/10.3389/fpls.2021.720462

Article

Comparison of disease severity caused by four soil-borne pathogens in winter cereal seedlings
Saad, Ahmed, Macdonald, Bethany, Martin, Anke, Knight, Noel L. and Percy, Cassandra. 2021. "Comparison of disease severity caused by four soil-borne pathogens in winter cereal seedlings." Crop and Pasture Science. 72 (5), pp. 325-334. https://doi.org/10.1071/cp20245

Article

Comparison of ELISA for Fusarium, visual screening, and deoxynivalenol analysis of Fusarium head blight for barley field nurseries
Hill, N. S., Neate, S. M., Cooper, B., Horsley, R., Schwarz, P., Dahleen, L. S., Smith, K. P., O'Donnell, K. and Reeves, J.. 2008. "Comparison of ELISA for Fusarium, visual screening, and deoxynivalenol analysis of Fusarium head blight for barley field nurseries ." Crop Science: a journal serving the international community of crop scientists. 48 (4), pp. 1389-1398. https://doi.org/10.2135/cropsci2007.05.0266

Article

Comparison of measurement methods for determining Macrophomina phaseolina isolate aggressiveness
Adorada, Dante, Adorada, Encarnacion, Gonzales, Precila and Sparks, Adam. 2019. "Comparison of measurement methods for determining Macrophomina phaseolina isolate aggressiveness." 22nd Biennial Australasian Plant Pathology Society Conference (APPS 2019): Strong Foundations, Future Innovations. Melbourne, Australia 25 - 28 Nov 2019

Poster

Comparison of Visual and Normalized Difference Vegetation Index (NDVI) Assessments to Predict the Yield Tolerance of Wheat Genotypes to Root-Lesion Nematode Pratylenchus thornei
Robinson, Neil A., Sheedy, Jason G. and Thompson, John P.. 2024. "Comparison of Visual and Normalized Difference Vegetation Index (NDVI) Assessments to Predict the Yield Tolerance of Wheat Genotypes to Root-Lesion Nematode Pratylenchus thornei." Agronomy. 14 (12). https://doi.org/10.3390/agronomy14123043

Article

Comprehensive analysis of little leaf disease incidence and resistance in eggplant
Muthusamy, Muthusamy, Yogiraj, Gawande Priya, Elaiyabharath, Thiyagarajan, Jesu, Bonipas Antony John, Johnson, Iruthayasamy, Jaffer, Shajith Basha, Dhanabalan, Shanmuga Priya, Boopathi, Narayanan Manikanda, Marimuthu, Subbaiyan, Shobeiri Nejad, Hamid, Adorada, Dante L. and Periyannan, Sambasivam. 2024. "Comprehensive analysis of little leaf disease incidence and resistance in eggplant." BMC Plant Biology. 24, p. 576. https://doi.org/10.1186/s12870-024-05257-4

Article

Confirmation of Paracercospora egenula causing leaf spot of eggplant in Hawaii
Vaghefi, Niloofar, Pethybridge, Sarah J., Shivas, Roger G. and Nelson, Scot C.. 2016. "Confirmation of Paracercospora egenula causing leaf spot of eggplant in Hawaii." Australasian Plant Disease Notes. 11 (1), pp. 35-37. https://doi.org/10.1007/s13314-016-0223-4

Article