Development of weather-based predictive models for Fusarium head blight and Deoxynivalenol accumulation for spring malting barley

Article


Bondalapati, K. D., Stein, J. .M, Neate, S. M., Halley, S. H., Osborne, L. E. and Hollingsworth, C. R.. 2012. "Development of weather-based predictive models for Fusarium head blight and Deoxynivalenol accumulation for spring malting barley." Plant Disease: an international journal of applied plant pathology. 96 (5), pp. 673-680. https://doi.org/10.1094/PDIS-05-11-0389
Article Title

Development of weather-based predictive models for Fusarium head blight and Deoxynivalenol accumulation for spring malting barley

ERA Journal ID2647
Article CategoryArticle
AuthorsBondalapati, K. D. (Author), Stein, J. .M (Author), Neate, S. M. (Author), Halley, S. H. (Author), Osborne, L. E. (Author) and Hollingsworth, C. R. (Author)
Journal TitlePlant Disease: an international journal of applied plant pathology
Journal Citation96 (5), pp. 673-680
Number of Pages8
Year2012
PublisherAmerican Phytopathological Society
Place of PublicationSt Paul, MN. United States
ISSN0191-2917
1943-7692
Digital Object Identifier (DOI)https://doi.org/10.1094/PDIS-05-11-0389
Abstract

The associations between Fusarium head blight (FHB), caused by Gibberella zeae, and deoxynivalenol (DON) accumulation in spring malting barley (Hordeum vulgare) and hourly weather conditions predictive of DON accumulation were examined using data from six growing seasons in the U.S. Northern Great Plains. Three commonly grown cultivars were planted throughout the region, and FHB disease and DON concentration were recorded. Nine predictor variables were calculated using hourly temperature and relative humidity during the 10 days preceding full head spike emergence. Simple logistic regression models were developed using these predictor variables based on a binary threshold for DON of 0.5 mg/kg. Four of the nine models had sensitivity greater than 80%, and specificity of these models ranged from 67 to 84% (n = 150). The most useful predictor was the joint effect of average hourly temperature and a weighted duration of uninterrupted hours (h) with relative humidity greater than or equal to 90%. The results of this study confirm that FHB incidence is significantly associated with DON accumulation in the grain and that weather conditions prior to full head emergence could be used to accurately predict the risk of economically significant DON accumulation for spring malting barley.

KeywordsFusarium; Gibberella zeae; Hordeum vulgare; United States; barley diseases; weather conditions; growing season
ANZSRC Field of Research 2020310805. Plant pathology
300406. Crop and pasture improvement (incl. selection and breeding)
300409. Crop and pasture protection (incl. pests, diseases and weeds)
Public Notes

© 2012 The American Phytopathological Society. Published version deposited in accordance with the copyright policy of the publisher.

Byline AffiliationsSouth Dakota State University, United States
North Dakota State University, United States
University of Minnesota, United States
Institution of OriginUniversity of Southern Queensland
Permalink -

https://research.usq.edu.au/item/q2660/development-of-weather-based-predictive-models-for-fusarium-head-blight-and-deoxynivalenol-accumulation-for-spring-malting-barley

  • 1703
    total views
  • 7
    total downloads
  • 0
    views this month
  • 0
    downloads this month

Export as

Related outputs

Genetic biofortification of wheat with zinc: Opportunities to fine-tune zinc uptake, transport and grain loading
Kamaral, Chandima, Neate, Stephen M., Gunasinghe, Niroshini, Milham, Paul J., Paterson, David J., Kopittke, Peter M. and Seneweera, Saman. 2021. "Genetic biofortification of wheat with zinc: Opportunities to fine-tune zinc uptake, transport and grain loading." Physiologia Plantarum. 174 (1), pp. 1-18. https://doi.org/10.1111/ppl.13612
Dimorphism in Neopseudocercosporella capsellae, an Emerging Pathogen Causing White Leaf Spot Disease of Brassicas
Gunasinghe, Niroshini, Barbetti, Martin J., You, Ming Pei, Dehigaspitiya, Prabuddha and Neate, Stephen. 2021. "Dimorphism in Neopseudocercosporella capsellae, an Emerging Pathogen Causing White Leaf Spot Disease of Brassicas." Frontiers in Cellular and Infection Microbiology. 11, pp. 1-15. https://doi.org/10.3389/fcimb.2021.678231
White Leaf Spot Caused by Neopseudocercosporella capsellae: A Re-emerging Disease of Brassicaceae
Gunasinghe, Niroshini, Barbetti, Martin J., You, Ming Pei, Burrell, Daniel and Neate, Stephen. 2020. "White Leaf Spot Caused by Neopseudocercosporella capsellae: A Re-emerging Disease of Brassicaceae." Frontiers in Cellular and Infection Microbiology. 10, pp. 1-16. https://doi.org/10.3389/fcimb.2020.588090
Diaporthe novem isolated from sunflower (Helianthus annuus) and other crop and weed hosts in Australia
Thompson, S. M., Tan, Y. P., Neate, S. M., Grams, R. M., Shivas, R. G., Lindbeck, K. and Aitken, E. A. B.. 2018. "Diaporthe novem isolated from sunflower (Helianthus annuus) and other crop and weed hosts in Australia." European Journal of Plant Pathology. 152 (3), pp. 823-831. https://doi.org/10.1007/s10658-018-1515-7
Genome-wide association study of spot form of net blotch resistance in the upper Midwest barley breeding programs
Burlakoti, R. R., Gyawali, S., Chao, S., Smith, K. P., Horsley, R. D., Cooper, B., Muehlbauer, G. J. and Neate, S. M.. 2017. "Genome-wide association study of spot form of net blotch resistance in the upper Midwest barley breeding programs." Phytopathology: International Journal of the American Phytopathological Society. 107 (1), pp. 100-108. https://doi.org/10.1094/PHYTO-03-16-0136-R
Draft genome sequence of the plant-pathogenic soil fungus Rhizoctonia solani anastomosis group 3 strain Rhs1AP
Cubeta, Marc A., Thomas, Elizabeth, Dean, Ralph A., Jabaji, Suha, Neate, Stephen M., Tavantzis, Stellos, Toda, Takeshi, Vilgalys, Rytas, Bharathan, Narayanaswamy, Fedorova-Abrams, Natalie, Pakala, Suman B., Pakala, Suchitra, Zafar, Nikhat, Joardar, Vinita, Losada, Liliana and Niermanh, William C.. 2014. "Draft genome sequence of the plant-pathogenic soil fungus Rhizoctonia solani anastomosis group 3 strain Rhs1AP." Genome Announcements. 2 (5), pp. 1-1. https://doi.org/10.1128/genomeA.01072-14
Surveillance for soilborne microbial biocontrol agents and plant pathogens
Whittle, Peter, Sundh, Ingvar and Neate, Stephen. 2015. "Surveillance for soilborne microbial biocontrol agents and plant pathogens." Jarrad, Frith, Low-Choy, Samantha and Mengersen, Kerrie (ed.) Biosecurity surveillance: quantitative approaches. Wallingford, United Kingdom. CABI. pp. 181-202
Germplasm enhancement for resistance to Pyrenophra tritici-repentis in wheat
Shankar, Manisha, Mather, Diane, Jorgensen, Dorthe, Golzar, Hossein, Chalmers, Ken, Hollaway, Grant, McLean, Mark, Neate, Stephen and Loughman, Rob. 2015. "Germplasm enhancement for resistance to Pyrenophra tritici-repentis in wheat." Ogihara, Yasunari, Takumi, Shigeo and Handa, Hirokazu (ed.) 12th International Wheat Genetics Symposium (IWGS 2013). Pacifico Yokohama, Japan 08 - 14 Sep 2013 Japan. https://doi.org/10.1007/978-4-431-55675-6_21
Markers for seedling and adult plant crown rot resistance in four partially resistant bread wheat sources
Martin, A., Bovill, W. D., Percy, C. D., Herde, D., Fletcher, S., Kelly, A., Neate, S. M. and Sutherland, M. W.. 2015. "Markers for seedling and adult plant crown rot resistance in four partially resistant bread wheat sources." Theoretical and Applied Genetics: international journal of plant breeding research. 128 (3), pp. 377-385. https://doi.org/10.1007/s00122-014-2437-1
Re-classification of the causal agent of white grain disorder on wheat as three separate species of Eutiarosporella
Thynne, Elisha, McDonald, Megan C., Evans, Margaret, Wallwork, Hugh, Neate, Stephen and Solomon, Peter S.. 2015. "Re-classification of the causal agent of white grain disorder on wheat as three separate species of Eutiarosporella." Australasian Plant Pathology. 44 (5), pp. 527-539. https://doi.org/10.1007/s13313-015-0367-2
Green and brown bridges between weeds and crops reveal novel Diaporthe species in Australia
Thompson, S. M., Tan, Y. P., Shivas, R. G., Neate, S. M., Morin, L., Bissett, A. and Aitken, E. A. B.. 2015. "Green and brown bridges between weeds and crops reveal novel Diaporthe species in Australia." Persoonia. 35, pp. 39-49. https://doi.org/10.3767/003158515X687506
Genetic relationships among populations of Gibberella zeae from barley, wheat, potato, and sugar beet in the upper midwest of the United States
Burlakoti, R. R., Ali, S., Secor, G. A., Neate, S. M., McMullen, M. P. and Adhikari, T. B.. 2008. "Genetic relationships among populations of Gibberella zeae from barley, wheat, potato, and sugar beet in the upper midwest of the United States." Phytopathology: International Journal of the American Phytopathological Society. 98 (9), pp. 969-976. https://doi.org/10.1094/PHYTO-98-9-0969
Trichothecene profiling and population genetic analysis of Gibberella zeae from barley in North Dakota and Minnesota
Burlakoti, Rishi R., Neate, Stephen M., Adhikari, Tika B., Gyawali, Sanjaya, Salas, Bacilio, Steffenson, Brian J. and Schwarz, Paul B.. 2011. "Trichothecene profiling and population genetic analysis of Gibberella zeae from barley in North Dakota and Minnesota ." Phytopathology: International Journal of the American Phytopathological Society. 101 (6), pp. 687-695. https://doi.org/10.1094/PHYTO-04-10-0101
Detecting brown patch and dollar spot development on Kentucky bluegrass by spectrometer sensing and tissue nitrate-N monitoring
Li, Deying, Smith, Ronald, Kinzer, Kasia and Neate, Stephen. 2008. "Detecting brown patch and dollar spot development on Kentucky bluegrass by spectrometer sensing and tissue nitrate-N monitoring ." Stier, J. C., Han, L. and Li, D. (ed.) 2nd International Conference on Turfgrass Science and Management for Sports Fields (ISHS 2007). Beijing, China 24 - 29 Jun 2007 Leuven, Belgium.
A single backcross effectively eliminates agronomic and quality alterations caused by somaclonal variation in transgenic barley
Bregitzer, P., Dahleen, Lynn S., Neate, Stephen, Schwarz, Paul and Manoharan, Muthusamy. 2008. "A single backcross effectively eliminates agronomic and quality alterations caused by somaclonal variation in transgenic barley ." Crop Science: a journal serving the international community of crop scientists. 48 (2), pp. 471-479. https://doi.org/10.2135/cropsci2007.06.0370
Comparison of ELISA for Fusarium, visual screening, and deoxynivalenol analysis of Fusarium head blight for barley field nurseries
Hill, N. S., Neate, S. M., Cooper, B., Horsley, R., Schwarz, P., Dahleen, L. S., Smith, K. P., O'Donnell, K. and Reeves, J.. 2008. "Comparison of ELISA for Fusarium, visual screening, and deoxynivalenol analysis of Fusarium head blight for barley field nurseries ." Crop Science: a journal serving the international community of crop scientists. 48 (4), pp. 1389-1398. https://doi.org/10.2135/cropsci2007.05.0266
Comparative mycotoxin profiles of Gibberella zeae populations from barley, wheat, potatoes, and sugar beets
Burlakoti, Rishi R., Ali, Shaukat, Secor, Gary A., Neate, Stephen M., McMullen, Marcia P. and Adhikari, Tika B.. 2008. "Comparative mycotoxin profiles of Gibberella zeae populations from barley, wheat, potatoes, and sugar beets ." Applied and Environmental Microbiology. 74 (21), pp. 6513-6520. https://doi.org/10.1128/AEM.01580-08
Identification of QTL conferring resistance to Fusarium head blight resistance in the breeding line C93-3230-24
Lamb, Kenneth E., Gonzalez-Hernandez, Jose L., Zhang, Bingxin, Green, Marci, Neate, Stephen M., Schwarz, Paul B. and Horsley, Richard D.. 2009. "Identification of QTL conferring resistance to Fusarium head blight resistance in the breeding line C93-3230-24." Crop Science: a journal serving the international community of crop scientists. 49 (5), pp. 1675-1680. https://doi.org/10.2135/cropsci2008.11.0642
A novel QTL for Septoria speckled leaf blotch resistance in barley (Hordeum vulgare L.) accession PI 643302 by whole-genome QTL mapping
Yu, G. T., Franckowiak, J. D., Lee, S. H., Horsley, R. D. and Neate, S. M.. 2010. "A novel QTL for Septoria speckled leaf blotch resistance in barley (Hordeum vulgare L.) accession PI 643302 by whole-genome QTL mapping." Genome. 53 (8), pp. 630-636. https://doi.org/10.1139/G10-032
Fusarium graminearum and Fusarium pseudograminearum caused the 2010 head blight epidemics in Australia
Obanor, F., Neate, S., Simpfendorfer, S., Sabburg, R., Wilson, P. and Chakraborty, S.. 2013. "Fusarium graminearum and Fusarium pseudograminearum caused the 2010 head blight epidemics in Australia ." Plant Pathology. 62 (1), pp. 79-91. https://doi.org/10.1111/j.1365-3059.2012.02615.x
A native QTL for Fusarium head blight resistance in North American barley (Hordeum vulgare L.) independent of height, maturity, and spike type loci
Yu, G. T., Franckowiak, J. D., Neate, S. M., Zhang, B. and Horsley, R. D.. 2010. "A native QTL for Fusarium head blight resistance in North American barley (Hordeum vulgare L.) independent of height, maturity, and spike type loci." Genome. 53 (2), pp. 111-118. https://doi.org/10.1139/G09-091
Stem cankers on sunflower (Helianthus annuus) in Australia reveal a complex of pathogenic Diaporthe (Phomopsis) species
Thompson, S. M., Tan, Y. P., Young, A. J., Neate, S. M., Aitken, E. A. B. and Shivas, R. G.. 2011. "Stem cankers on sunflower (Helianthus annuus) in Australia reveal a complex of pathogenic Diaporthe (Phomopsis) species." Persoonia. 27, pp. 80-89. https://doi.org/10.3767/003158511X617110
Genome-wide association mapping of Fusarium head blight resistance in contemporary barley breeding germplasm
Massman, J., Cooper, B., Horsley, R., Neate, S., Dill-Macky, R., Chao, S., Dong, Y., Schwarz, P., Muehlbauer, G. J. and Smith, K. P.. 2011. "Genome-wide association mapping of Fusarium head blight resistance in contemporary barley breeding germplasm." Molecular Breeding: new strategies in plant improvement. 27 (4), pp. 439-454. https://doi.org/10.1007/s11032-010-9442-0
Genetic structure of Cochliobolus sativus populations sampled from roots and leaves of barley and wheat in North Dakota
Gyawali, Sanjaya, Neate, Stephen M., Adhikari, Tika B., Puri, Krishna D., Burlakoti, Rishi R. and Zhong, Shaobin. 2012. "Genetic structure of Cochliobolus sativus populations sampled from roots and leaves of barley and wheat in North Dakota." Journal of Phytopathology. 160 (11-12), pp. 637-646. https://doi.org/10.1111/j.1439-0434.2012.01956.x
Fungal community structure in disease suppressive soils assessed by 28S LSU gene sequencing
Penton, C. Ryan, Gupta, V. V. S. R., Tiedje, James M., Neate, Stephen M., Ophel-Keller, Kathy, Gillings, Michael, Harvey, Paul, Pham, Amanda and Roget, David K.. 2014. "Fungal community structure in disease suppressive soils assessed by 28S LSU gene sequencing." PLoS One. 9 (4), pp. 1-12. https://doi.org/10.1371/journal.pone.0093893