Calibrating APSIM for forage sorghum using remote sensing and field data under sub-optimal growth conditions

Article


Della Nave, Facundo N., Ojeda, Jonathan J., Irisarri, J. Gonzalo N., Pembleton, Keith, Oyarzabal, Mariano and Oesterheld, Martin. 2022. "Calibrating APSIM for forage sorghum using remote sensing and field data under sub-optimal growth conditions." Agricultural Systems. 201, pp. 1-14. https://doi.org/10.1016/j.agsy.2022.103459
Article Title

Calibrating APSIM for forage sorghum using remote sensing and field data under sub-optimal growth conditions

ERA Journal ID5173
Article CategoryArticle
AuthorsDella Nave, Facundo N. (Author), Ojeda, Jonathan J. (Author), Irisarri, J. Gonzalo N. (Author), Pembleton, Keith (Author), Oyarzabal, Mariano (Author) and Oesterheld, Martin (Author)
Journal TitleAgricultural Systems
Journal Citation201, pp. 1-14
Article Number103459
Number of Pages14
Year2022
PublisherElsevier
Place of PublicationNetherlands
ISSN0308-521X
1873-2267
Digital Object Identifier (DOI)https://doi.org/10.1016/j.agsy.2022.103459
Web Address (URL)https://www.sciencedirect.com/science/article/pii/S0308521X22000956
Abstract

Context: Mechanistic sorghum models have been mostly used to estimate sorghum yield for grain sorghum for a range of genotype, management, and environmental conditions. There is a lack of model testing for crop growth and development responses for forage genotypes and information for phenological parameterization under sub-optimal water and nitrogen stress conditions in forage systems. Objective: The aims of this study were to (i) use NDVI to parametrize APSIM model to estimate forage sorghum phenology, (ii) calibrate APSIM to simulate green cover, intercepted solar radiation and aboveground biomass, and (iii) quantify the variance of inter-annual aboveground biomass and the effect of water availability on forage sorghum biomass under sub-optimal environment × management combinations. Methods: We used climate, soil, management records and sorghum crop observations collected from farm and field experiments in Argentina and Australia. NDVI values were gathered from Sentinel-2 and a handheld optical sensor and then related to fAPAR measurements. Phenological stages were derived from fAPAR seasonal dynamics and implemented as input in the APSIM calibration. Finally, we assessed the temporal AGB variability through long-term simulations analysis. Results and Conclusions: NDVI seasonal dynamics accurately represented the fraction of the absorbed photosynthetically active radiation (R2=0.92) and then, the remote-sensing parametrized APSIM model satisfactorily simulated crop phenology (CCC=0.75-0.92, NRMSE=9-22%). The model was also able to satisfactorily simulate crop growth (CCC=0.89 and NRMSE=24.8% for green cover; CCC=0.81 and NRMSE=34.6% for intercepted solar radiation; CCC=0.91 and NRMSE=37% for aboveground biomass). APSIM simulations during 22 years across 5 contrasting locations showed high inter-annual variability of aboveground biomass (CV=47%), mainly driven by inter-annual variation of soil water availability (CV=20%). Our study demonstrated that (i) remote sensing data was a reliable source for APSIM phenology parametrization, (ii) the model was able to satisfactorily simulate crop growth and development of forage sorghum under sub-optimal conditions across several genotype × environment × management combinations and (iii) water availability was the main driver of aboveground biomass inter-annual variance. Significance: Given the pressure of the global human population to satisfy an increasing demand for food, our results provide a new path for the combined use of remote sensing and mechanistic modelling to improve forage sorghum biomass estimations in marginal environments.

KeywordsSorghum bicolor (L.) Moench; Crop modelling; APSIM next generation; Inter-annual biomass variability; Sentinel-2; Remote sensing
ANZSRC Field of Research 2020300205. Agricultural production systems simulation
300403. Agronomy
370402. Earth and space science informatics
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Byline AffiliationsUniversity of Buenos Aires, Argentina
Regrow Ag, Australia
School of Agriculture and Environmental Sciences
Institution of OriginUniversity of Southern Queensland
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Ojeda, J. J., Pembleton, K. G., Islam, M. R., Agnusdei, M. G. and Garcia, S. C.. 2016. "Evaluation of the agricultural production systems simulator simulating lucerne and annual ryegrass dry matter yield in the Argentine pampas and south-eastern Australia." Agricultural Systems. 143, pp. 61-75. https://doi.org/10.1016/j.agsy.2015.12.005
Production interactions between combinations of 4 perennial legumes and 5 perennial grasses, grown under high input management with and without applications of nitrogen
Smith, Rowan, Hall, Eric, Corkrey, Ross, Parsons, David, Pembleton, Keith and Rawnsley, Richard. 2015. "Production interactions between combinations of 4 perennial legumes and 5 perennial grasses, grown under high input management with and without applications of nitrogen." 17th Australian Agronomy Conference 2015: Building Productive, Diverse and Sustainable Landscapes (AAC 2015). Hobart, Australia 20 - 24 Sep 2015 Australia.
Summer production of alternative species in comparison to perennial ryegrass and white clover for high input pasture systems
Smith, Rowan, Hall, Eric, Corkrey, Ross, Parsons, David, Pembleton, Keith and Rawnsley, Richard. 2015. "Summer production of alternative species in comparison to perennial ryegrass and white clover for high input pasture systems." 17th Australian Agronomy Conference 2015: Building Productive, Diverse and Sustainable Landscapes (AAC 2015). Hobart, Australia 20 - 24 Sep 2015 Australia.
Stoloniferous red clover cv. Rubitas is a valuable companion to PRG and phalaris
Watson, Brigid, Pembleton, Keith, Smith, Rowan, Corkrey, Ross and Rawnsley, Richard. 2015. "Stoloniferous red clover cv. Rubitas is a valuable companion to PRG and phalaris." 17th Australian Agronomy Conference 2015: Building Productive, Diverse and Sustainable Landscapes (AAC 2015). Hobart, Australia 20 - 24 Sep 2015 Australia.
Chicory (Cichorium intybus L.) can beat the heat during summer drought in southeast Australian dairying regions
Langworthy, Adam, Pembleton, Keith, Rawnsley, Richard, Harrison, Matthew, Lane, Peter, Henry, David and Corkrey, Ross. 2015. "Chicory (Cichorium intybus L.) can beat the heat during summer drought in southeast Australian dairying regions." 17th Australian Agronomy Conference 2015: Building Productive, Diverse and Sustainable Landscapes (AAC 2015). Hobart, Australia 20 - 24 Sep 2015 Australia.
Response of the DCAD of plantain to potassium fertilisation
Pembleton, K. G, Hill, B. D. and Rawnsley, R. P.. 2015. "Response of the DCAD of plantain to potassium fertilisation." 17th Australian Agronomy Conference 2015: Building Productive, Diverse and Sustainable Landscapes (AAC 2015). Hobart, Australia 20 - 24 Sep 2015 Australia.
APSIM Kale appropriately simulates spring and autumn grown forage kale crops in Tasmania
Pembleton, K.G, Harrison, M.T., Rawnsley, R.P., Zykowski, R., Chakwizira, E., de Ruiter, J. and Johnstone, P.R.. 2015. "APSIM Kale appropriately simulates spring and autumn grown forage kale crops in Tasmania." 17th Australian Agronomy Conference 2015: Building Productive, Diverse and Sustainable Landscapes (AAC 2015). Hobart, Australia 20 - 24 Sep 2015 Australlia.
Plantain and chicory could potentially complement the perennial ryegrass dominant dairy feedbase
Pembleton, K. G.. 2015. "Plantain and chicory could potentially complement the perennial ryegrass dominant dairy feedbase." 17th Australian Agronomy Conference 2015: Building Productive, Diverse and Sustainable Landscapes (AAC 2015). Hobart, Australia 20 - 24 Sep 2015 Hobart.
Comparing within paddock yield variability of perennial ryegrass monocultures and perennial ryegrass, white clover and plantain mixtures using yield mapping
McLaren, David K. and Pembleton, Keith G.. 2015. "Comparing within paddock yield variability of perennial ryegrass monocultures and perennial ryegrass, white clover and plantain mixtures using yield mapping." 17th Australian Agronomy Conference 2015: Building Productive, Diverse and Sustainable Landscapes (AAC 2015). Hobart, Australia 20 - 24 Sep 2015 Australia.
Effect of defoliation management on expression of the ‘high sugar’ cultivar trait in Tasmania
Turner, Lydia R., Donaghy, Daniel J, Pembleton, Keith G. and Rawnsley, Richard P. 2013. "Effect of defoliation management on expression of the ‘high sugar’ cultivar trait in Tasmania." 22nd International Grassland Congress: Revitalising Grasslands to Sustain Our Communities. Sydney, Australia 15 - 19 Sep 2013 Australia.
Effect of nitrogen fertiliser applications on botanical composition
Turner, Lydia R., Donaghy, Daniel J., Pembleton, Keith G. and Rawnsley, Richard P.. 2013. "Effect of nitrogen fertiliser applications on botanical composition." 22nd International Grassland Congress: Revitalising Grasslands to Sustain Our Communities. Sydney, Australia 15 - 19 Sep 2013 Australia.
Impact of grazing on the silage yield of forage oat crops
Pembleton, Keith G., Harrison, Matthew T. and Rawnsley, Richard P.. 2013. "Impact of grazing on the silage yield of forage oat crops." 22nd International Grassland Congress: Revitalising Grasslands to Sustain Our Communities. Sydney, Australia 15 - 19 Sep 2013 Australia.
Early sowing and irrigating of rape crops in cool temperate environments boosts forage yield potential
Harrison, Matthew T., Pembleton, Keith G. and Rawnsley, Richard P.. 2013. "Early sowing and irrigating of rape crops in cool temperate environments boosts forage yield potential." 22nd International Grassland Congress: Revitalising Grasslands to Sustain Our Communities. Sydney, Australia 15 - 19 Sep 2013 Australia.
Frost risk associated with growing maize for silage on Tasmanian dairy farms
Pembleton, Keith. 2012. "Frost risk associated with growing maize for silage on Tasmanian dairy farms." Rawnsley RP (ed.) 16th Australian Agronomy Conference: Capturing Opportunities and Overcoming Obstacles in Australian Agronomy (ASA 2012). Armidale, Australia 14 - 18 Oct 2012 Armidale, Australia.
Partitioning of taproot constituents and crown bud development are affected by water deficit in regrowing alfalfa (Medicago sativa L.)
Pembleton, Keith G., Volenec, Jeffrey J., Rawnsley, Richard P. and Donaghy, Daniel J.. 2010. "Partitioning of taproot constituents and crown bud development are affected by water deficit in regrowing alfalfa (Medicago sativa L.)." Crop Science: a journal serving the international community of crop scientists. 50 (3), pp. 989-999. https://doi.org/10.2135/cropsci2009.03.0140
Yield, yield components and shoot morphology of four contrasting lucerne (Medicago sativa) cultivars grown in three cool temperate environments
Pembleton, K. G., Donaghy, D. J., Volenec, J. J., Smith, R. S. and Rawnsley, R. P.. 2010. "Yield, yield components and shoot morphology of four contrasting lucerne (Medicago sativa) cultivars grown in three cool temperate environments." Crop and Pasture Science. 61 (6), pp. 503-511. https://doi.org/10.1071/CP09351
Genotype by environment interactions of lucerne (Medicago sativa L.) in a cool temperate climate
Pembleton, K. G., Smith, R. S., Rawnsley, R. P., Donaghy, D. J. and Humphries, A. W.. 2010. "Genotype by environment interactions of lucerne (Medicago sativa L.) in a cool temperate climate." Crop and Pasture Science. 61 (6), pp. 493-502. https://doi.org/10.1071/CP09269
Effect of summer irrigation on seasonal changes in taproot reserves and the expression of winter dormancy/activity in four contrasting lucerne cultivars
Pembleton, K. G., Cunningham, S. M. and Volenec, J. J.. 2010. "Effect of summer irrigation on seasonal changes in taproot reserves and the expression of winter dormancy/activity in four contrasting lucerne cultivars." Crop and Pasture Science. 61 (11), pp. 873 - 884. https://doi.org/10.1071/CP10030
Utilising leaf number as an indicator for defoliation to restrict stem growth in rhodes grass (Chloris gayana) cv. Callide
Pembleton, K.G., Lowe, K.F. and Bahnisch, L.M.. 2009. "Utilising leaf number as an indicator for defoliation to restrict stem growth in rhodes grass (Chloris gayana) cv. Callide." Tropical Grasslands. 43, pp. 79-85.
Water deficit alters canopy structure but not photosynthesis in regrowing alfalfa (Medicago sativa L.)
Pembleton, Keith, Rawnsley, Richard P., Donaghy, Daniel J. and Volenec, Jeffrey J.. 2009. "Water deficit alters canopy structure but not photosynthesis in regrowing alfalfa (Medicago sativa L.)." Crop Science: a journal serving the international community of crop scientists. 49 (2), pp. 722-731. https://doi.org/10.2135/cropsci2008.08.0456
Effect of defoliation interval and height on the growth and quality of Arachis pintoi cv. Amarillo
Sinclair, K., Lowe, K.F. and Pembleton, K.G.. 2007. "Effect of defoliation interval and height on the growth and quality of Arachis pintoi cv. Amarillo." Tropical Grasslands. 41 (4), pp. 260-268.
Potential of tropical forages for the Tasmanian dairy industry
Pembleton, Keith, Rawnsley, Richard, Donaghy, Danny and Chamberlain, Peter. 2006. "Potential of tropical forages for the Tasmanian dairy industry." 13th Australian Agronomy Conference 2006. Perth, Australia 10 - 14 Sep 2006 Australia. Australian Society of Agronomy.