More than meets the eye — unexpected diversity in downy mildews (Oomycetes) on grasses in Australia

Article

Ryley, M. J., Tan, Y. P., Kruse, J., Thines, M. and Shivas, R. G.. 2022. "More than meets the eye — unexpected diversity in downy mildews (Oomycetes) on grasses in Australia." Mycological Progress: international journal of fungal sciences. 21 (1), pp. 297-310. https://doi.org/10.1007/s11557-021-01750-4
Article Title

More than meets the eye — unexpected diversity in downy mildews (Oomycetes) on grasses in Australia

ERA Journal ID2503
Article CategoryArticle
AuthorsRyley, M. J. (Author), Tan, Y. P. (Author), Kruse, J. (Author), Thines, M. (Author) and Shivas, R. G. (Author)
Journal TitleMycological Progress: international journal of fungal sciences
Journal Citation21 (1), pp. 297-310
Number of Pages14
Year2022
PublisherSpringer
Place of PublicationGermany
ISSN1617-416X
1861-8952
Digital Object Identifier (DOI)https://doi.org/10.1007/s11557-021-01750-4
Web Address (URL)https://link.springer.com/article/10.1007/s11557-021-01750-4
Abstract

Eleven new downy mildew species on grasses are described from Australia based on morphology and DNA sequence analysis of the mitochondrial cox2 and/or ribosomal large subunit genes. Peronosclerospora aristidae is proposed to accommodate a downy mildew on the indigenous Australian tropical grass Aristida hygrometrica. Baobabopsis marneyi occurs on Enneapogon spp. across northern Australia. Eraphthora drenthii and E. occultata are present on Eragrostis spp. in eastern Australia. Seven new species, Peronosclerospora ischaemi on Ischaemum fragile; P. panici from a single herbarium specimen of Panicum laevinode; P. sehimatis on Sehima nervosum; P. shizachyrii on Shizachyrium fragile; and three species, P. boughtoniae, P. jamesiae, and P. mactaggartii from indigenous Australian Sorghum spp., occur in northern Australia. Other published records of downy mildews on grasses in Australia are discussed.

KeywordsGrasses; New species; Phylogeny; Poaceae; Systematics; Taxonomy
ANZSRC Field of Research 2020310705. Mycology
Byline AffiliationsCentre for Crop Health
Department of Agriculture and Fisheries, Queensland
Goethe University, Germany
Institution of OriginUniversity of Southern Queensland
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Tan, Yu Pei, Shivas, Roger G., Marney, Thomas S., Edwards, Jacqueline, Dearnaley, John, Jami, Fahimeh and Burgess, Treena I.. 2019. "Australian cultures of Botryosphaeriaceae held in Queensland and Victoria plant pathology herbaria revisited." Australasian Plant Pathology. 48 (1), pp. 25-34. https://doi.org/10.1007/s13313-018-0559-7
Confirmation of Peronospora agrimoniae as a distinct species
Petrzelova, Irena, Choi, Young-Joon, Jemelkova, Michaela, Dolezalova, Ivana, Kruse, Julia, Thines, Marco and Kitner, Miloslav. 2017. "Confirmation of Peronospora agrimoniae as a distinct species." European Journal of Plant Pathology. 147 (4), pp. 887-896. https://doi.org/10.1007/s10658-016-1058-8
The presumably North American species Plasmopara wilsonii is present in Germany on the ornamental plant Geranium phaeum
Kruse, Julia, Thines, Marco and Choi, Young-Joon. 2016. "The presumably North American species Plasmopara wilsonii is present in Germany on the ornamental plant Geranium phaeum." European Journal of Plant Pathology. 145 (4), pp. 999-1005. https://doi.org/10.1007/s10658-016-0885-y
Biodiscovery and the Queensland Plant Pathology Herbarium
Shivas, Roger G., Beasley, Dean R., Bransgrove, Kaylene, Tan, Yu Pei and Bulow, Geoff. 2019. "Biodiscovery and the Queensland Plant Pathology Herbarium." Microbiology Australia. 40 (3), pp. 134-137. https://doi.org/10.1071/MA19036
One stop shop II: taxonomic update with molecular phylogeny for important phytopathogenic genera: 26–50 (2019)
Jayawardena, Ruvishika S., Hyde, Kevin D., Jeewon, Rajesh, Ghobad-Nejhad, Masoomeh, Wanasinghe, Dhanushka N., Liu, NingGuo, Phillips, Alan J. L., Oliveira-Filho, Jose Ribamar C., da Silva, Gladstone A., Gibertoni, Tatiana B., Abeywikrama, P., Carris, L. M., Chethana, K. W. T., Dissanayake, A. J., Hongsanan, S., Jayasiri, S. C., McTaggart, A. R., Perera, R. H., Phutthacharoen, K., ..., Kang, Ji-Chuan. 2019. "One stop shop II: taxonomic update with molecular phylogeny for important phytopathogenic genera: 26–50 (2019)." Fungal Diversity. 94 (1), pp. 41-129. https://doi.org/10.1007/s13225-019-00418-5
Diaporthe novem isolated from sunflower (Helianthus annuus) and other crop and weed hosts in Australia
Thompson, S. M., Tan, Y. P., Neate, S. M., Grams, R. M., Shivas, R. G., Lindbeck, K. and Aitken, E. A. B.. 2018. "Diaporthe novem isolated from sunflower (Helianthus annuus) and other crop and weed hosts in Australia." European Journal of Plant Pathology. 152 (3), pp. 823-831. https://doi.org/10.1007/s10658-018-1515-7
Genomic sequence analysis reveals diversity of Australian Xanthomonas species associated with bacterial leaf spot of tomato, capsicum and chilli
Roach, R., Mann, R., Gambley, C. G., Chapman, T., Shivas, R. G. and Rodoni, B.. 2019. "Genomic sequence analysis reveals diversity of Australian Xanthomonas species associated with bacterial leaf spot of tomato, capsicum and chilli." BMC Genomics. 20 (1 - 310), pp. 1-22. https://doi.org/10.1186/s12864-019-5600-x
Re-evaluation of Mycoleptodiscus species and morphologically similar fungi
Hernandez-Restrepo, M., Bezerra, J. D. P., Tan, Y. P., Wiederhold, N., Crous, P. W., Guarro, J. and Gené, J.. 2019. "Re-evaluation of Mycoleptodiscus species and morphologically similar fungi." Persoonia. 42, pp. 205-227. https://doi.org/10.3767/persoonia.2019.42.08
Asexual and sexual morphs of Moesziomyces revisited
Kruse, Julia, Doehlemann, Gunther, Kemen, Eric and Thines, Marco. 2017. "Asexual and sexual morphs of Moesziomyces revisited." IMA Fungus: the global mycological journal. 8 (1), pp. 117-129. https://doi.org/10.5598/imafungus.2017.08.01.09
(2507) Proposal to reject the name Ramularia gibba (Ustilaginomycotina: Entylomatales)
Kruse, Julia and Thines, Marco. 2017. "(2507) Proposal to reject the name Ramularia gibba (Ustilaginomycotina: Entylomatales)." Taxon: international journal of plant taxonomy, phylogeny and evolution. 66 (2), pp. 515-516. https://doi.org/10.12705/662.19
Ustilago species causing leaf-stripe smut revisited
Kruse, Julia, Dietrich, Wolfgang, Zimmermann, Horst, Klenke, Friedemann, Richter, Udo, Richter, Heidrun and Thines, Marco. 2018. "Ustilago species causing leaf-stripe smut revisited." IMA Fungus: the global mycological journal. 9 (1), pp. 49-73. https://doi.org/10.5598/imafungus.2018.09.01.05
Broad host range species in specialised pathogen groups should be treated with suspicion – a case study on Entyloma infecting Ranunculus
Kruse, J., Piatek, M., Lutz, M. and Thines, M.. 2018. "Broad host range species in specialised pathogen groups should be treated with suspicion – a case study on Entyloma infecting Ranunculus." Persoonia. 41, pp. 175-201. https://doi.org/10.3767/persoonia.2018.41.09
The origin and diversification of the Entorrhizales: deep evolutionary roots but recent speciation with a phylogenetic and phenotypic split between associates of the Cyperaceae and Juncaceae
Riess, Kai, Schon, Max E., Ziegler, Rebekka, Lutz, Matthias, Shivas, Roger G., Piatek, Marcin and Garnica, Sigisfredo. 2019. "The origin and diversification of the Entorrhizales: deep evolutionary roots but recent speciation with a phylogenetic and phenotypic split between associates of the Cyperaceae and Juncaceae." Organisms Diversity and Evolution. 19 (1), pp. 13-30. https://doi.org/10.1007/s13127-018-0384-4
The first smut fungus, Thecaphora anthemidis sp. nov. (Glomosporiaceae), described from Anthemis (Asteraceae)
Kruse, Julia, Kummer, Volker, Shivas, Roger G. and Thines, Marco. 2018. "The first smut fungus, Thecaphora anthemidis sp. nov. (Glomosporiaceae), described from Anthemis (Asteraceae)." MycoKeys. 41, pp. 39-50. https://doi.org/10.3897/mycokeys.41.28454
Current status of the Botryosphaeriaceae in Australia
Burgess, Treena I., Tan, Yu Pei, Garnas, Jeff, Edwards, Jacqueline, Scarlett, Kelly A., Shuttleworth, Lucas A., Daniel, Rosalie, Dann, Elizabeth K., Parkinson, Louisamarie E., Dinh, Quang, Shivas, Roger G. and Jami, Fahimeh. 2019. "Current status of the Botryosphaeriaceae in Australia." Australasian Plant Pathology. 48 (1), pp. 35-44. https://doi.org/10.1007/s13313-018-0577-5
Multi-locus phylogeny and taxonomy of Exserohilum
Hernandez-Restrepo, M., Madrid, H., Tan, Y. P., da Cunha, K. C., Gené, J., Guarro, J. and Crous, P. W.. 2018. "Multi-locus phylogeny and taxonomy of Exserohilum." Persoonia. 41, pp. 71-108. https://doi.org/10.3767/persoonia.2018.41.05
Fungal planet description sheets: 716-784
Crous, P. W., Wingfield, M. J., Burgess, T. I., Hardy, G. E. St. J., Gene, J., Guarro, J., Baseia, I. G., Garcia, D., Gusmao, L. F. P., Souza-Motta, C. M., Thangavel, R., Adamcik, S., Barili, A., Barnes, C. W., Bezerra, J. D. P., Bordallo, J. J., Cano-Lira, J. F., de Oliveira, R. J. V., Ercole, E., ..., Groenewald, J. Z.. 2018. "Fungal planet description sheets: 716-784." Persoonia. 40, pp. 240-393. https://doi.org/10.3767/persoonia.2018.40.10
Deciphering the biology of Cryptophyllachora eurasiatica gen. et sp. nov., an often cryptic pathogen of an allergenic weed, Ambrosia artemisiifolia
Kiss, Levente, Kovacs, Gabor M., Boka, Karoly, Bohar, Gyula, Boharne, Krisztina Varga, Nemeth, Mark Z., Takamatsu, Susumu, Shin, Hyeon-Dong, Hayova, Vera, Nischwitz, Claudia, Seier, Marion K., Evans, Harry C., Cannon, Paul F., Ash, Gavin James, Shivas, Roger G. and Muller-Scharer, Heinz. 2018. "Deciphering the biology of Cryptophyllachora eurasiatica gen. et sp. nov., an often cryptic pathogen of an allergenic weed, Ambrosia artemisiifolia." Scientific Reports. 8, pp. 1-14. https://doi.org/10.1038/s41598-018-29102-5
First Reports of Diaporthe kongii, D. masirevicii, and D. ueckerae Associated with Stem and Peg Dieback on Peanut in Australia
Thompson, S. M., Grams, R. A., Neate, S. M., Shivas, R.G., Ryley, M. J, Tan, Y. P., Aitken, E. A. B., Wright, G. C and O’Connor, D. J.. 2018. "First Reports of Diaporthe kongii, D. masirevicii, and D. ueckerae Associated with Stem and Peg Dieback on Peanut in Australia." Plant Disease: an international journal of applied plant pathology. 102 (7), p. 1459. https://doi.org/10.1094/PDIS-12-17-1930-PDN
Cryptic species of Curvularia in the culture collection of the Queensland Plant Pathology Herbarium
Tan, Yu Pei, Crous, Pedro W. and Shivas, Roger G.. 2018. "Cryptic species of Curvularia in the culture collection of the Queensland Plant Pathology Herbarium." MycoKeys. 35, pp. 1-25. https://doi.org/10.3897/mycokeys.35.25665
Diversity of gall-forming rusts (Uromycladium, Pucciniales) on Acacia in Australia
Doungsa-ard, C., McTaggart, A. R., Geering, A. D. W. and Shivas, R. G.. 2018. "Diversity of gall-forming rusts (Uromycladium, Pucciniales) on Acacia in Australia." Persoonia. 40, pp. 221-238. https://doi.org/10.3767/persoonia.2018.40.09
A dynamic, web-based resource to identify rust fungi (Pucciniales) in southern Africa
McTaggart, Alistair R., Beasley, Dean R., Wingfield, Michael J., Wood, Alan R., Pretorius, Zakkie K., Drenth, Andre, Shivas, Roger G. and Roux, Jolanda. 2017. "A dynamic, web-based resource to identify rust fungi (Pucciniales) in southern Africa." MycoKeys. 26, pp. 77-83. https://doi.org/10.3897/mycokeys.26.14602
Pathogenicity of nectriaceous fungi on avocado in Australia
Parkinson, Louisamarie E., Shivas, Roger G. and Dann, Elizabeth K.. 2017. "Pathogenicity of nectriaceous fungi on avocado in Australia." Phytopathology: International Journal of the American Phytopathological Society. 107 (12), pp. 1479-1485. https://doi.org/10.1094/PHYTO-03-17-0084-R
First report of cercospora blight of asparagus officinalis caused by cercospora asparagi in New York
Hay, F. S., Maloney, E., Vaghefi, N., Shivas, R. G and Pethybridge, S. J. 2017. "First report of cercospora blight of asparagus officinalis caused by cercospora asparagi in New York." Plant Disease: an international journal of applied plant pathology. 101 (11), pp. 1953-1953. https://doi.org/10.1094/PDIS-05-17-0648-PDN
Colletotrichum species associated with pre-and post-harvest diseases of avocado and mango in eastern Australia
Giblin, F. R., Tan, Y. P., Mitchell, R., Coates, L. M., Irwin, J. A. G. and Shivas, R.G.. 2018. "Colletotrichum species associated with pre-and post-harvest diseases of avocado and mango in eastern Australia." Australasian Plant Pathology. 47 (3), pp. 269-276. https://doi.org/10.1007/s13313-018-0553-0
Identification of Xanthomonas species associated with bacterial leaf spot of tomato, capsicum and chilli crops in eastern Australia
Roach, R., Mann, R., Gambley, C. G., Shivas, R. G. and Rodoni, B.. 2018. "Identification of Xanthomonas species associated with bacterial leaf spot of tomato, capsicum and chilli crops in eastern Australia." European Journal of Plant Pathology. 150 (3), pp. 595-608. https://doi.org/10.1007/s10658-017-1303-9
Notes for genera: Ascomycota
Wijayawardene, Nalin N., Hyde, Kevin D., Rajeshkumar, Kunhiraman C., Hawksworth, David L., Madrid, Hugo, Kirk, Paul M., Braun, Uwe, Singh, Rajshree V., Crous, Pedro W., Kukwa, Martin, Lucking, Robert, Kurtzman, Cletus P., Yurkov, Andrey, Haelewaters, Danny, Aptroot, Andre, Lumbsch, H. Thorsten, Timdal, Einar, Ertz, Damien, Etayo, Javier, ..., Karunarathna, Samantha C.. 2017. "Notes for genera: Ascomycota." Fungal Diversity. 86 (1), pp. 1-594. https://doi.org/10.1007/s13225-017-0386-0
Ten new species of Macalpinomyces on Eriachne in northern Australia
Li, Ying-Ming, Shivas, Roger G., McTaggart, Alistair R., Zhao, Peng and Cai, Lei. 2017. "Ten new species of Macalpinomyces on Eriachne in northern Australia." Mycologia. 109 (3), pp. 408-421. https://doi.org/10.1080/00275514.2017.1330026
Genera of phytopathogenic fungi: GOPHY 1
Marin-Felix, Y., Groenewald, J. Z., Cai, L., Chen, Q., Marincowitz, S., Barnes, I., Bensch, K., Braun, U., Camporesi, E., Damm, U., de Beer, Z. W., Dissanayake, A., Edwards, J., Giraldo, A., Hernandez-Restrepo, M., Hyde, K. D., Jayawardena, R. S., Lombard, L., Luangsa-ard, J., ..., Crous, P. W.. 2017. "Genera of phytopathogenic fungi: GOPHY 1." Studies in Mycology. 86 (86), pp. 99-216. https://doi.org/10.1016/j.simyco.2017.04.002
Curvularia tsudae comb. nov. et nom. nov., formerly Pseudocochliobolus australiensis, and a revised synonymy for Curvularia australiensis
Deng, Hui, Tan, Yu Pei, Shivas, Roger G. and Niu, Yong Chun. 2015. "Curvularia tsudae comb. nov. et nom. nov., formerly Pseudocochliobolus australiensis, and a revised synonymy for Curvularia australiensis." Mycoscience. 56 (1), pp. 24-28. https://doi.org/10.1016/j.myc.2014.02.002
Johnalcornia gen. et. comb. nov., and nine new combinations in Curvularia based on molecular phylogenetic analysis
Tan, Yu Pei, Madrid, Hugo, Crous, Pedro W. and Shivas, Roger G.. 2014. "Johnalcornia gen. et. comb. nov., and nine new combinations in Curvularia based on molecular phylogenetic analysis." Australasian Plant Pathology. 43 (6), pp. 589-603. https://doi.org/10.1007/s13313-014-0315-6
Ravenelia acaciae-arabicae and Ravenelia evansii are distinct species on Acacia nilotica subsp. indica in India
Shivas, R. G., Balu, A., Singh, S., Ahmed, S. I. and Dhileepan, K.. 2013. "Ravenelia acaciae-arabicae and Ravenelia evansii are distinct species on Acacia nilotica subsp. indica in India." Australasian Mycologist. 31, pp. 31-37.
The Amsterdam Declaration on Fungal Nomenclature
Hawksworth, David L., Crous, Pedro W., Redhead, Scott A., Reynolds, Don R., Samson, Robert A., Seifert, Keith A., Taylor, John W., Wingfield, Michael J., Abaci, Ozlem, Aime, Catherine, Asan, Ahmet, Bai, Feng-Yan, de Beer, Z. Wilhelm, Begerow, Dominik, Berikten, Derya, Boekhout, Teun, Buchanan, Peter K., Burgess, Treena, Buzina, Walter, ..., Zhang, Ning. 2011. "The Amsterdam Declaration on Fungal Nomenclature." IMA Fungus: the global mycological journal. 2 (1), pp. 105-112. https://doi.org/10.5598/imafungus.2011.02.01.14
Fungal planet description sheets: 69-91
Crous, P. W., Groenewald, J. Z., Shivas, R. G., Edwards, J., Seifert, K. A., Alfenas, A. C., Alfenas, R. F., Burgess, T. I., Carnegie, A. J., Hardy, G. E. St J., Quaedvlieg, W., Young, A. J., McTaggart, A. R., Pascoe, I. G., Porter, I. J., Louis-Seize, G., Pereira, O. L., Hüberli, D., Jung, T., ..., White, G. P.. 2011. "Fungal planet description sheets: 69-91." Persoonia. 26, pp. 108-156. https://doi.org/10.3767/003158511X581723
Endophytic and pathogenic Phyllosticta species, with reference to those associated with Citrus Black spot
Glienke, C., Pereira, O. L., Stringari, D., Fabris, J., Kava-Cordeiro, V., Galli-Terasawa, L., Cunnington, J., Shivas, R. G., Groenewald, J. Z. and Crous, P. W.. 2011. "Endophytic and pathogenic Phyllosticta species, with reference to those associated with Citrus Black spot." Persoonia. 26, pp. 47-56. https://doi.org/10.3767/003158511X569169
Fungal planet description sheets: 107-127
Crous, P. W., Summerell, B. A., Shivas, R. G., Burgess, T. I., Lombard, L., Groenewald, J. Z., Liew, E. C Y, McTaggart, A. R., Hardy, G. E S J, Huberli, D., De cock, C. A., Dreyer, L. L., Granke, L. L., Hausbeck, M. K., Guest, D. I., Shuttleworth, L. A., Jung, T., Koukol, O., Lennox, C. L., ..., Windstam, S. T.. 2012. "Fungal planet description sheets: 107-127." Persoonia. 28, pp. 138-182. https://doi.org/10.3767/003158512X652633
Fungal planet description sheets: 320–370
Crous, P. W., Wingfield, M. J., Guarro, J., Hernandez-Restrep, M., Sutton, D. A., Acharya, K., Barber, P. A., Boekhout, T., Dimitrov, R. A., Duenas, M., Dutta, A. K., Gene, J., Gouliamova, D. E., Groenewald, M., Lombard, L., Morozova, O. V., Sarkar, J., Smith, M. Th., Stchigel, A. M., ..., Groenewald, J. Z.. 2015. "Fungal planet description sheets: 320–370." Persoonia. 34, pp. 167-266. https://doi.org/10.3767/003158515X688433
Novel species of Cercospora and Pseudocercospora (Capnodiales, Mycosphaerellaceae) from Australia
Shivas, Roger Graham, Marney, Thomas Stephen, Tan, Yu Pei and McTaggart, Alistair Ross. 2015. "Novel species of Cercospora and Pseudocercospora (Capnodiales, Mycosphaerellaceae) from Australia." Fungal Biology. 119 (5), pp. 362-369. https://doi.org/10.1016/j.funbio.2014.09.004
Wongia gen. nov. (Papulosaceae, Sordariomycetes), a new generic name for two root-infecting fungi from Australia
Khemmuk, Wanporn, Geering, Andrew D. W. and Shivas, Roger G.. 2016. "Wongia gen. nov. (Papulosaceae, Sordariomycetes), a new generic name for two root-infecting fungi from Australia." IMA Fungus: the global mycological journal. 7 (2), pp. 247-252. https://doi.org/10.5598/imafungus.2016.07.02.04
A phylogenetic and taxonomic re-evaluation of the Bipolaris - Cochliobolus - Curvularia Complex
Manamgoda, Dimuthu S., Cai, Lei, McKenzie, Eric H. C., Crous, Pedro W., Madrid, Hugo, Chukeatirote, Ekachai, Shivas, Roger G., Tan, Yu Pei and Hyde, Kevin D.. 2012. "A phylogenetic and taxonomic re-evaluation of the Bipolaris - Cochliobolus - Curvularia Complex." Fungal Diversity. 56 (1), pp. 131-144. https://doi.org/10.1007/s13225-012-0189-2
Molecular phylogenetic analysis reveals six new species of Diaporthe from Australia
Tan, Y. P., Edwards, J., Grice, K. R E and Shivas, R. G.. 2013. "Molecular phylogenetic analysis reveals six new species of Diaporthe from Australia." Fungal Diversity. 61 (1), pp. 251-260. https://doi.org/10.1007/s13225-013-0242-9
Online identification guides for Australian smut fungi (Ustilaginomycotina) and rust fungi (Pucciniales)
Shivas, Roger G., Beasley, Dean R. and McTaggart, Alistair R.. 2014. "Online identification guides for Australian smut fungi (Ustilaginomycotina) and rust fungi (Pucciniales)." IMA Fungus: the global mycological journal. 5 (2), pp. 195-202. https://doi.org/10.5598/imafungus.2014.05.02.03
Baobabopsis, a new genus of graminicolous downy mildews from tropical Australia, with an updated key to the genera of downy mildews
Thines, Marco, Telle, Sabine, Choi, Young Joon, Tan, Yu Pei and Shivas, Roger G.. 2015. "Baobabopsis, a new genus of graminicolous downy mildews from tropical Australia, with an updated key to the genera of downy mildews." IMA Fungus: the global mycological journal. 6 (2), pp. 483-491. https://doi.org/10.5598/imafungus.2015.06.02.12
Novel Pathotypes of Elsinoë australis Associated with Citrus australasica and Simmondsia chinensis in Australia
Miles, Andrew K., Tan, Yu Pei, Shivas, Roger G. and Drenth, André. 2015. "Novel Pathotypes of Elsinoë australis Associated with Citrus australasica and Simmondsia chinensis in Australia." Tropical Plant Pathology. 40 (1), pp. 26-34. https://doi.org/10.1007/s40858-015-0005-0
Mycosarcoma (Ustilaginaceae), a resurrected generic name for corn smut (Ustilago maydis) and its close relatives with hypertrophied, tubular sori
McTaggart, Alistair R., Shivas, Roger G., Boekhout, Teun, Oberwinkler, Franz, Vanky, Kalman, Pennycook, Shaun R. and Begerow, Dominik. 2016. "Mycosarcoma (Ustilaginaceae), a resurrected generic name for corn smut (Ustilago maydis) and its close relatives with hypertrophied, tubular sori." IMA Fungus: the global mycological journal. 7 (2), pp. 309-315. https://doi.org/10.5598/imafungus.2016.07.02.10
Colletotrichum species in Australia
Shivas, Roger G., Tan, Yu Pei, Edwards, Jacqueline, Dinh, Quang, Maxwell, Aaron, Andjic, Vera, Liberato, José R., Anderson, Chris, Beasley, Dean R., Bransgrove, Kaylene, Coates, Lindy M., Cowan, Karren, Daniel, Rosalie, Dean, Jan R., Lomavatu, Mereia Fong, Mercado-Escueta, Doris, Mitchell, Roger W., Thangavel, Raja, Tran-Nguyen, Lucy T T and Weir, Bevan S.. 2016. "Colletotrichum species in Australia." Australasian Plant Pathology. 45 (5), pp. 447-464. https://doi.org/10.1007/s13313-016-0443-2
Eight novel Bipolaris species identified from John L. Alcorn’s collections at the Queensland Plant Pathology Herbarium (BRIP)
Tan, Yu Pei, Shivas, Roger G. and Crous, Pedro W.. 2016. "Eight novel Bipolaris species identified from John L. Alcorn’s collections at the Queensland Plant Pathology Herbarium (BRIP)." Mycological Progress: international journal of fungal sciences. 15 (10-11), pp. 1203-1214. https://doi.org/10.1007/s11557-016-1240-6
Phyllosticta species on orchids (Orchidaceae), introducing Phyllosticta speewahensis sp. nov. (Phyllostictaceae, Ascomycota) from northern Australia
Shivas, Roger Graham, Tan, Yu Pei and Grice, Kathy R. E.. 2013. "Phyllosticta species on orchids (Orchidaceae), introducing Phyllosticta speewahensis sp. nov. (Phyllostictaceae, Ascomycota) from northern Australia." Sydowia: an international journal of mycology. 65 (1), pp. 139-146.
Dry flower disease of Macadamia in Australia caused by Neopestalotiopsis macadamiae sp. nov. and Pestalotiopsis macadamiae sp. nov
Akinsanmi, Olufemi A., Nisa, Shaheen, Jeff-Ego, Olumdie S., Shivas, Roger G. and Drenth, Andre. 2017. "Dry flower disease of Macadamia in Australia caused by Neopestalotiopsis macadamiae sp. nov. and Pestalotiopsis macadamiae sp. nov." Plant Disease: an international journal of applied plant pathology. 101 (1), pp. 45-53. https://doi.org/10.1094/PDIS-05-16-0630-RE
Genome sequences of Pseudomonas spp. isolated from cereal crops
Gardiner, Donald M., Stiller, Jiri, Covarelli, Lorenzo, Lindeberg, Magdalen, Shivas, Roger G. and Manners, John M.. 2013. "Genome sequences of Pseudomonas spp. isolated from cereal crops." Genome Announcements. 1 (3), pp. 1-2. https://doi.org/10.1128/genomeA.00209-13
Two new species of Moreaua (Ustilaginomycetes), on Actinoschoenus and Chrysitrix, from Western Australia
Shivas, Roger G., Barrett, Matthew D., Barrett, Russell L. and Vanky, Kalman. 2011. "Two new species of Moreaua (Ustilaginomycetes), on Actinoschoenus and Chrysitrix, from Western Australia." Mycologia Balcanica. 8, pp. 137-140.
Cryptic diversity in Tranzscheliella spp. (Ustilaginales) is driven by host switches
Li, Ying-Ming, Shivas, Roger G. and Cai, Lei. 2017. "Cryptic diversity in Tranzscheliella spp. (Ustilaginales) is driven by host switches." Scientific Reports. 7. https://doi.org/10.1038/srep43549
Novel species of Gliocladiopsis (Nectriaceae, Hypocreales, Ascomycota) from avocado roots (Persea americana) in Australia
Parkinson, Louisamarie E., Shivas, Roger G. and Dann, Elizabeth K.. 2017. "Novel species of Gliocladiopsis (Nectriaceae, Hypocreales, Ascomycota) from avocado roots (Persea americana) in Australia." Mycoscience. 58 (2), pp. 95-102. https://doi.org/10.1016/j.myc.2016.10.004
First record of Ustilago sporoboli-indici in Australia
Vitelli, J. S., Tan, Y. P., Riding, N., Holdom, D. G., Chamberlain, A. and Shivas, R.G.. 2017. "First record of Ustilago sporoboli-indici in Australia." Australasian Plant Disease Notes. 12 (1), pp. 1-3. https://doi.org/10.1007/s13314-017-0277-y
First report of rice blast (Magnaporthe Oryzae) on rice (Oryza Sativa) in Western Australia
You, M. P., Lanoiselet, V., Wang, C. P., Shivas, R. G., Li, Y. P. and Barbetti, M. J.. 2012. "First report of rice blast (Magnaporthe Oryzae) on rice (Oryza Sativa) in Western Australia." Plant Disease: an international journal of applied plant pathology. 96 (8), pp. 1228-1229. https://doi.org/10.1094/PDIS-05-12-0420-PDN
First report of Sarocladium Oryzae causing sheath rot on rice (Oryza sativa) in Western Australia
Lanoiselet, V., You, M. P., Li, Y. P., Wang, C. P., Shivas, R. G. and Barbetti, M. J.. 2012. "First report of Sarocladium Oryzae causing sheath rot on rice (Oryza sativa) in Western Australia." Plant Disease: an international journal of applied plant pathology. 96 (9), pp. 1382-1383. https://doi.org/10.1094/PDIS-04-12-0415-PDN
First record of Thyronectria pinicola on Pinus radiata in Australia
Carnegie, A. J., Shuey, L. S., McTaggart, A. R. and Shivas, R. G.. 2015. "First record of Thyronectria pinicola on Pinus radiata in Australia." Plant Disease: an international journal of applied plant pathology. 99 (8), pp. 1182-1183. https://doi.org/10.1094/PDIS-02-15-0187-PDN
Host jumps shaped the diversity of extant rust fungi (Pucciniales)
McTaggart, Alistair R., Shivas, Roger G., van der Nest, Magriet A., Roux, Jolanda, Wingfield, Brenda D. and Wingfield, Michael J.. 2015. "Host jumps shaped the diversity of extant rust fungi (Pucciniales)." New Phytologist. 209 (3), pp. 1149-1158. https://doi.org/10.1111/nph.13686
Synopsis of Phyllosticta in China
Zhang, Ke, Shivas, Roger G. and Cai, Lei. 2015. "Synopsis of Phyllosticta in China." Mycology. 6 (1), pp. 50-75. https://doi.org/10.1080/21501203.2015.1027507
Uredinopsis pteridis and Desmella aneimiae, the first rust fungi (Pucciniales) reported on ferns (Pteridophyta) in Australia
McTaggart, A. R., Geering, A. D. W. and Shivas, R. G.. 2014. "Uredinopsis pteridis and Desmella aneimiae, the first rust fungi (Pucciniales) reported on ferns (Pteridophyta) in Australia." Australasian Plant Pathology. 9 (1), pp. 149-152. https://doi.org/10.1007/s13314-014-0149-7
One stop shop: backbone trees for important phytopathogenic genera: I (2014)
Hyde, Kevin D., Nilsson, R. Henrik, Alias, S. Aisyah, Ariyawansa, Hiran A., Blair, Jaime E., Cai, Lei, de Cock, Arthur W. A. M., Dissanayake, Asha J., Glockling, Sally L., Goonasekara, Ishani D., Gorczak, Michal, Hahn, Matthias, Jayawardena, Ruvishika S., van Kan, Jan A. L., Lawrence, Matthew H., Levesque, C. Andre, Li, Xinghong, Liu, Jian-Kui, Maharachchikumbura, Sajeewa S. N., ..., Zhou, Nan. 2014. "One stop shop: backbone trees for important phytopathogenic genera: I (2014)." Fungal Diversity. 67 (1), pp. 21-125. https://doi.org/10.1007/s13225-014-0298-1
Cryptic fungal species unmasked
Shivas, Roger G. and Cai, Lei. 2012. "Cryptic fungal species unmasked." Microbiology Australia. 33 (1), pp. 36-37.
Polyphasic characterization of four new plant pathogenic Phyllosticta species from China, Japan, and the United States
Zhou, Nan, Chen, Qian, Carroll, George, Zhang, Ning, Shivas, Roger G. and Cai, Lei. 2015. "Polyphasic characterization of four new plant pathogenic Phyllosticta species from China, Japan, and the United States." Fungal Biology. 119 (5), pp. 433-466. https://doi.org/10.1016/j.funbio.2014.08.006
Puccinia psidii in Queensland, Australia: disease symptoms, distribution and impact
Pegg, G. S., Giblin, F. R., McTaggart, A. R., Guymer, G. P., Taylor, H., Ireland, K. B., Shivas, R. G. and Perry, S.. 2014. "Puccinia psidii in Queensland, Australia: disease symptoms, distribution and impact." Plant Pathology. 63 (5), pp. 1005-1021. https://doi.org/10.1111/ppa.12173
Two new Entyloma species (Entylomatales, Ustilaginomycota) from the USA
Denchev, Teodor T., Denchev, Cvetomir M. and Shivas, Roger G.. 2013. "Two new Entyloma species (Entylomatales, Ustilaginomycota) from the USA." Mycobiota. 3 (3), pp. 35-39. https://doi.org/10.12664/mycobiota.2013.03.04
Emended description of Anomalomyces (Ustilaginales), including Anomalomyces yakirrae sp. nov. on Yakirra paucifl pauciflora (Poaceae) from Australia
Shivas, Roger G., Lutz, Matthias, McTaggart, Alistair R. and Vanky, Kalman. 2013. "Emended description of Anomalomyces (Ustilaginales), including Anomalomyces yakirrae sp. nov. on Yakirra paucifl pauciflora (Poaceae) from Australia." Mycobiota. 1, pp. 17-24. https://doi.org/10.12664/mycobiota.2013.01.03
Eriocortex eriocauli, gen. et sp. nov. (Ustilaginomycetes) from Australia
Vanky, Kalman, Shivas, Roger G., Barrett, Matthew D. and Lutz, Matthias. 2013. "Eriocortex eriocauli, gen. et sp. nov. (Ustilaginomycetes) from Australia." Mycobiota. 1, pp. 9-16. https://doi.org/10.12664/mycobiota.2013.01.02
Aizoago, a new genus, and two new species of smut fungi (Ustilaginales) on Tetragonia (Aizoaceae) in Australia
Vanky, Kalman and Shivas, Roger G.. 2013. "Aizoago, a new genus, and two new species of smut fungi (Ustilaginales) on Tetragonia (Aizoaceae) in Australia." Mycobiota. 1, pp. 1-7. https://doi.org/10.12664/mycobiota.2013.01.01
Carpogenic germination of sclerotia of Sclerotinia minor and ascosporic infection of pyrethrum flowers
O'Malley, Thomas B., Hay, Frank S., Scott, Jason B., Gent, David H., Shivas, Roger G. and Pethybridge, Sarah J.. 2015. "Carpogenic germination of sclerotia of Sclerotinia minor and ascosporic infection of pyrethrum flowers." Canadian Journal of Plant Pathology. 37 (2), pp. 179-187. https://doi.org/10.1080/07060661.2015.1036122
The Colletotrichum boninense species complex
Damm, U., Cannon, P. F., Woudenberg, J. H C., Johnston, P. R., Weir, B. S., Tan, Y. P., Shivas, R. G. and Crous, P. W.. 2012. "The Colletotrichum boninense species complex." Studies in Mycology. 73 (73), pp. 1-36. https://doi.org/10.3114/sim0002
Erratum to: Identification of rust fungi (Pucciniales) on species of Allium in Australia (Australasian Plant Pathology, (2016), 45, 6, (581-592), 10.1007/s13313-016-0445-0)
McTaggart, Alistair R., Shivas, Roger G., Doungsa-ard, Chanintorn, Weese, Terri L., Beasley, Dean R., Hall, Barbara H., Metcalf, Dean A. and Geering, Andrew D W. 2016. "Erratum to: Identification of rust fungi (Pucciniales) on species of Allium in Australia (Australasian Plant Pathology, (2016), 45, 6, (581-592), 10.1007/s13313-016-0445-0)." Australasian Plant Pathology. 45 (6), pp. 593-594. https://doi.org/10.1007/s13313-016-0451-2
Three new species of Tilletia on Eriachne from north-western Australia
Li, Ying-Ming, Shivas, Roger Graham and Cai, Lei. 2014. "Three new species of Tilletia on Eriachne from north-western Australia." Mycoscience. 55 (5), pp. 361-366. https://doi.org/10.1016/j.myc.2013.12.003
Pathogenicity studies in avocado with three nectriaceous fungi, Calonectria ilicicola, Gliocladiopsis sp. and Ilyonectria liriodendri
Dann, E. K., Cooke, A. W., Forsberg, L. I., Pegg, K. G., Tan, Y. P. and Shivas, R. G.. 2012. "Pathogenicity studies in avocado with three nectriaceous fungi, Calonectria ilicicola, Gliocladiopsis sp. and Ilyonectria liriodendri." Plant Pathology. 61 (5), pp. 896-902. https://doi.org/10.1111/j.1365-3059.2011.02579.x
Powdery mildews on Clitoria in Australia
Liberato, José R. and Shivas, Roger G.. 2012. "Powdery mildews on Clitoria in Australia." Australasian Plant Disease Notes. 7 (1), pp. 111-114. https://doi.org/10.1007/s13314-012-0060-z
Fungal planet description sheets: 128-153
Crous, P. W., Shivas, R. G., Wingfield, M. J., Summerell, B. A., Rossman, A. Y., Alves, J. L., Adams, G. C., Barreto, R. W., Bell, A., Coutinho, M. L., Lombard, L., Quaedvlieg, W., Videira, S. I R, Groenewald, J. Z., Tan, Y. P., Mahoney, D. P., Macedo, F., Flory, S. L., Gates, G., ..., Walker, D. M.. 2012. "Fungal planet description sheets: 128-153." Persoonia. 29, pp. 146-201. https://doi.org/10.3767/003158512X661589
Epitypification and neotypification: guidelines with appropriate and inappropriate examples
Ariyawansa, Hiran A., Hawksworth, David L., Hyde, Kevin D., Jones, E. B. Gareth, Maharachchikumbura, Sajeewa S. N., Manamgoda, Dimuthu S., Thambugala, Kasun M., Udayanga, Dhanushka, Camporesi, Erio, Daranagama, Anupama, Jayawardena, Ruvishika, Liu, Jian-Kui, McKenzie, Eric H. C., Phookamsak, Rungtiwa, Senanayake, Indunil C., Shivas, Roger G., Tian, Qing and Xu, Jian-Chu. 2014. "Epitypification and neotypification: guidelines with appropriate and inappropriate examples." Fungal Diversity. 69 (1), pp. 57-91. https://doi.org/10.1007/s13225-014-0315-4
Survey and prioritisation of potential biological control agents for prickly acacia (Acacia nilotica subsp. indica) in southern India
Dhileepan, Kunjithapatham, Balu, Ayyapillai, Murugesan, Selvaraj, Senthilkumar, Ponnusamy and Shivas, Roger G.. 2013. "Survey and prioritisation of potential biological control agents for prickly acacia (Acacia nilotica subsp. indica) in southern India." Biocontrol Science and Technology. 23 (6), pp. 646-664. https://doi.org/10.1080/09583157.2013.788689
Naming and outline of Dothideomycetes–2014 including proposals for the protection or suppression of generic names
Wijayawardene, Nalin N., Crous, Pedro W., Kirk, Paul M., Hawksworth, David L., Boonmee, Saranyaphat, Braun, Uwe, Dai, Dong Qin, D'souza, Melvina J., Diederich, Paul, Dissanayake, Asha, Phookamsak, Rungtiwa, Hyde, Kevin D., Doilom, Mingkhuan, Hongsanan, Singang, Jayawardena, Ruvishika, Liu, Jian-Kui, Manamgoda, Dimuthu S., Thambugala, Kasun M., Wanasinghe, Dhanushka N., ..., Jaklitsch, Walter M.. 2014. "Naming and outline of Dothideomycetes–2014 including proposals for the protection or suppression of generic names." Fungal Diversity. 69 (1), pp. 1-55. https://doi.org/10.1007/s13225-014-0309-2
Fungal planet description sheets: 92-106
Crous, P. W., Verkley, G. J M, Groenewald, J. Z., Summerell, B. A., Shivas, R. G., Romberg, M. and Mel'nik, V. A.. 2011. "Fungal planet description sheets: 92-106." Persoonia. 27, pp. 130-162. https://doi.org/10.3767/003158511X617561
A re-appraisal of Harknessia (Diaporthales), and the introduction of Harknessiaceae fam. nov
Crous, P. W., Summerell, B. A., Shivas, R. G., Carnegie, A. J. and Groenewald, J. Z.. 2012. "A re-appraisal of Harknessia (Diaporthales), and the introduction of Harknessiaceae fam. nov." Persoonia. 28, pp. 49-65. https://doi.org/10.3767/003158512X639791
The evolution of species concepts and species recognition criteria in plant pathogenic fungi
Cai, Lei, Giraud, Tatiana, Zhang, Ning, Cai, Guohong, Begerow, Dominik and Shivas, Roger G.. 2011. "The evolution of species concepts and species recognition criteria in plant pathogenic fungi." Fungal Diversity. 50 (1), pp. 121-133. https://doi.org/10.1007/s13225-011-0127-8
Soral synapomorphies are significant for the systematics of the Ustilago-Sporisorium-Macalpinomyces complex (Ustilaginaceae)
McTaggart, A. R., Shivas, R. G., Geering, A. D W, Callaghan, B., Vanky, K. and Scharaschkin, T.. 2012. "Soral synapomorphies are significant for the systematics of the Ustilago-Sporisorium-Macalpinomyces complex (Ustilaginaceae)." Persoonia. 29, pp. 63-77. https://doi.org/10.3767/003158512X660562
A review of the Ustilago-Sporisorium-Macalpinomyces complex
McTaggart, A. R., Shivas, R. G., Geering, A. D. W., Vanky, K. and Scharaschkin, T.. 2012. "A review of the Ustilago-Sporisorium-Macalpinomyces complex." Persoonia. 29, pp. 55-62. https://doi.org/10.3767/003158512X660283
Taxonomic revision of Ustilago, Sporisorium and Macalpinomyces
McTaggart, A. R., Shivas, R. G., Geering, A. D. W., Vanky, K. and Scharaschkin, T.. 2012. "Taxonomic revision of Ustilago, Sporisorium and Macalpinomyces." Persoonia. 29, pp. 116-132. https://doi.org/10.3767/003158512X661462
Fungal planet description sheets: 214-280
Crous, P. W., Shivas, R. G., Quaedvlieg, W., Lombard, L., Groenewald, J. Z., van der Bank, M., Zhang, Y., Summerell, B. A., Guarro, J., Wingfield, M. J., Tan, Y. P., Cano-Lira, J. F., García, D., Marin-Felix, Y., Alvarado, P., Gené, J., Hernández-Restrepo, M., Marin-Felix, Y., Stchigel, A. M., ..., Wong, P. T. W.. 2014. "Fungal planet description sheets: 214-280." Persoonia. 32, pp. 184-306. https://doi.org/10.3767/003158514X682395
Fungal planet description sheets: 371–399
Crous, P. W., Wingfield, M. J., Le Roux, J. J., Richardson, D. M., Strasberg, D., Shivas, R. G., Alvarado, P., Edwards, J., Moreno, G., Sharma, R., Sonawane, M. S., Tan, Y. P., Altes, A., Barasubiye, T., Barnes, C. W., Blanchette, R. A., Boertmann, D., Bogo, A., Carlavilla, J. R., ..., Groenewald, J. Z.. 2015. "Fungal planet description sheets: 371–399." Persoonia. 35, pp. 264-327. https://doi.org/10.3767/003158515X690269
Fungal planet description sheets: 469-557
Crous, P. W., Wingfield, M. J., Burgess, T. I., Hardy, G. E. St. J., Crane, C., Barrett, S., Cano-Lira, J. F., Le Roux, J. J., Thangavel, R., Guarro, J., Stchigel, A. M., Martin, M. P., Alfredo, D. S., Barber, P. A., Barreto, R. W., Baseia, I. G., Cano-Canals, J., Cheewangkoon, R., Ferreira, R. J., ..., Groenewald, J. Z.. 2016. "Fungal planet description sheets: 469-557." Persoonia. 37, pp. 218-403. https://doi.org/10.3767/003158516X694499
The rusts on Goodeniaceae and Stylidiaceae
McTaggart, A. R., Geering, A. D. W. and Shivas, R. G.. 2014. "The rusts on Goodeniaceae and Stylidiaceae." Mycological Progress: international journal of fungal sciences. 13 (4), pp. 1017-1025. https://doi.org/10.1007/s11557-014-0989-8
Phylogeny and taxonomy of the genus Cylindrocladiella
Lombard, L., Shivas, R. G., To-Anun, C. and Crous, P. W.. 2012. "Phylogeny and taxonomy of the genus Cylindrocladiella." Mycological Progress: international journal of fungal sciences. 11 (4), pp. 835-868. https://doi.org/10.1007/s11557-011-0799-1
Sporisorium warambiense sp. nov., a fourth smut fungus on Xerochloa in Australia
Piatek, Marcin and Shivas, Roger G.. 2011. "Sporisorium warambiense sp. nov., a fourth smut fungus on Xerochloa in Australia." Mycological Progress: international journal of fungal sciences. 10 (1), pp. 57-60. https://doi.org/10.1007/s11557-010-0673-6
Real-time PCR assays for the detection of Puccinia psidii
Baskarathevan, Jeyaseelan, Taylor, R. K., Ho, W., Alexander, B. J. R., McDougal, R. L. and Shivas, R. G.. 2016. "Real-time PCR assays for the detection of Puccinia psidii." Plant Disease: an international journal of applied plant pathology. 100 (3), pp. 617-624. https://doi.org/10.1094/PDIS-08-15-0851-RE
First report of Didymella americana on baby lima bean (Phaseolus lunatus)
Gorny, Adrienne M., Pethybridge, Sarah J., Kikkert, Julie R. and Shivas, Roger G.. 2016. "First report of Didymella americana on baby lima bean (Phaseolus lunatus)." Canadian Journal of Plant Pathology. 38 (3), pp. 389-394. https://doi.org/10.1080/07060661.2016.1195877
Colletotrichum siamense, C. theobromicola and C. queenslandicum, from several plant species and the identification of C. asianum in the Northern Territory, Australia
James, R. S., Ray, J., Tan, Y. P. and Shivas, R. G.. 2014. "Colletotrichum siamense, C. theobromicola and C. queenslandicum, from several plant species and the identification of C. asianum in the Northern Territory, Australia." Australasian Plant Disease Notes. 9 (1), pp. 138-138. https://doi.org/10.1007/s13314-014-0138-x
Elucidation of the taxonomy and pathological status of Pyricularia associated with banana blast in Australia
Male, Mike F., Tan, Yu Pei, Vawdrey, Lynton L. and Shivas, Roger G.. 2011. "Elucidation of the taxonomy and pathological status of Pyricularia associated with banana blast in Australia." Australasian Plant Disease Notes. 6 (1), pp. 22-25. https://doi.org/10.1007/s13314-011-0008-8
First report of shoot blight of persimmon caused by Diaporthe neotheicola in Australia
Golzar, H., Wang, C., Tan, Y. P. and Shivas, R. G.. 2012. "First report of shoot blight of persimmon caused by Diaporthe neotheicola in Australia." Australasian Plant Disease Notes. 7 (1), pp. 115-117. https://doi.org/10.1007/s13314-012-0061-y
First report of Phoma multirostrata in Australia
Golzar, H., Lanoiselet, V., Wang, C., Tan, Y. P. and Shivas, R. G.. 2015. "First report of Phoma multirostrata in Australia." Australasian Plant Disease Notes. 10 (1), pp. 8-9. https://doi.org/10.1007/s13314-015-0161-6
A new host genus and species (Afzelia xylocarpa) for Phakopsora pachyrhizi found in Thailand
Seemadua, Suneerat, Bhasabutra, Tharntip, Beasley, Dean R., Tan, Yu Pei and Shivas, Roger G.. 2012. "A new host genus and species (Afzelia xylocarpa) for Phakopsora pachyrhizi found in Thailand." Australasian Plant Disease Notes. 7 (1), pp. 125-126. https://doi.org/10.1007/s13314-012-0064-8
First record of Prospodium appendiculatum on Tecoma stans in Thailand
Bhasabutra, Tharntip, Seemadua, Suneerat and Shivas, Roger G.. 2012. "First record of Prospodium appendiculatum on Tecoma stans in Thailand." Australasian Plant Disease Notes. 7 (1), pp. 123-124. https://doi.org/10.1007/s13314-012-0063-9
Recovery, pathogenicity and molecular sequencing of Calonectria ilicicola which causes collar rot on Carica papaya in Australia
Male, M. F., Tan, Y. P., Vawdrey, L. L. and Shivas, R. G.. 2012. "Recovery, pathogenicity and molecular sequencing of Calonectria ilicicola which causes collar rot on Carica papaya in Australia." Australasian Plant Disease Notes. 7 (1), pp. 137-138. https://doi.org/10.1007/s13314-012-0068-4
Thekopsora minima causes blueberry rust in south-eastern Queensland and northern New South Wales
McTaggart, A. R., Geering, A. D. W. and Shivas, R. G.. 2013. "Thekopsora minima causes blueberry rust in south-eastern Queensland and northern New South Wales." Australasian Plant Disease Notes. 8 (1), pp. 81-83. https://doi.org/10.1007/s13314-013-0101-2
First report of Vialaea minutella in Australia, its association with mango branch dieback and systematic placement of Vialaea in the Xylariales
McTaggart, A. R., Grice, K. R. and Shivas, R. G.. 2013. "First report of Vialaea minutella in Australia, its association with mango branch dieback and systematic placement of Vialaea in the Xylariales." Australasian Plant Disease Notes. 8 (1), pp. 63-66. https://doi.org/10.1007/s13314-013-0096-8
First report of Masseeëlla capparis in Australia
Liberato, J. R., McTaggart, A. R. and Shivas, R. G.. 2014. "First report of Masseeëlla capparis in Australia." Australasian Plant Disease Notes. 9 (1), pp. 121-125. https://doi.org/10.1007/s13314-013-0121-y
A co-evolutionary relationship exists between Endoraecium (Pucciniales) and its acacia hosts in Australia
McTaggart, A. R., Doungsa-Ard, C., Geering, A. D. W., Shivas, R. G. and Aime, M. C.. 2015. "A co-evolutionary relationship exists between Endoraecium (Pucciniales) and its acacia hosts in Australia." Persoonia. 35, pp. 50-62. https://doi.org/10.3767/003158515X687588
Confirmation of Paracercospora egenula causing leaf spot of eggplant in Hawaii
Vaghefi, Niloofar, Pethybridge, Sarah J., Shivas, Roger G. and Nelson, Scot C.. 2016. "Confirmation of Paracercospora egenula causing leaf spot of eggplant in Hawaii." Australasian Plant Disease Notes. 11 (1), pp. 35-37. https://doi.org/10.1007/s13314-016-0223-4
Plasmopara sphagneticolae sp. nov. (Peronosporales) on Sphagneticola (Asteraceae) in Australia
McTaggart, Alistair R., Shuey, Louise S., McKenna, Stephen G., Davis, Richard I. and Shivas, Roger G.. 2015. "Plasmopara sphagneticolae sp. nov. (Peronosporales) on Sphagneticola (Asteraceae) in Australia." Australasian Plant Pathology. 44 (1), pp. 81-85. https://doi.org/10.1007/s13313-014-0323-6
Fungi associated with foliar diseases of wild and cultivated rice (Oryza spp.) in northern Queensland
Khemmuk, Wanporn, Henry, Robert J., Geering, Andrew D. W. and Shivas, Roger G.. 2016. "Fungi associated with foliar diseases of wild and cultivated rice (Oryza spp.) in northern Queensland." Australasian Plant Pathology. 45 (3), pp. 297-308. https://doi.org/10.1007/s13313-016-0418-3
Review of Fusarium species isolated in association with mango malformation in Australia
Liew, E. C. Y., Laurence, M. H., Pearce, C. A., Shivas, R. G., Johnson, G. I., Tan, Y. P., Edwards, J., Perry, S., Cooke, A. W. and Summerell, B. A.. 2016. "Review of Fusarium species isolated in association with mango malformation in Australia." Australasian Plant Pathology. 45 (6), pp. 547-559. https://doi.org/10.1007/s13313-016-0454-z
Detection of Fusarium oxysporum f. sp. cubense tropical race 4 strain in northern Queensland
O'Neill, W. T., Pattemore, J. A., Perry, S., Beasley, D. R., Tan, Y. P., Smyth, A. L., Goosem, C. H., Thomson, K. M., Hobbs, R. L., Shivas, R. G., Henderson, J., O'Dwyer, C., Grice, K. R. E., Trevorrow, P., Pathania, N. and Vawdrey, L. L.. 2016. "Detection of Fusarium oxysporum f. sp. cubense tropical race 4 strain in northern Queensland." Australasian Plant Disease Notes. 11 (33), pp. 33-35. https://doi.org/10.1007/s13314-016-0218-1
Uromycladium falcatarium sp. nov., the cause of gall rust on Paraserianthes falcataria in south-east Asia
Doungsa-ard, Chanintorn, McTaggart, Alistair R., Geering, Andrew D. W., Dalisay, Teresita U., Ray, Jane and Shivas, Roger G.. 2015. "Uromycladium falcatarium sp. nov., the cause of gall rust on Paraserianthes falcataria in south-east Asia." Australasian Plant Pathology. 44 (1), pp. 25-30. https://doi.org/10.1007/s13313-014-0301-z
Towards a universal barcode of oomycetes - a comparison of the cox1 and cox2 loci
Choi, Young Joon, Kruse, Julia, Nam, Bora, Nigrelli, Lisa, Telle, Sabine, Thines, Marco, Ploch, Sebastian, Beakes, Gordon, Glockling, Sally, Shin, Hyeon Dong, Shivas, Roger G. and Voglmayr, Hermann. 2015. "Towards a universal barcode of oomycetes - a comparison of the cox1 and cox2 loci." Molecular Ecology Resources. 15 (6), pp. 1275-1288. https://doi.org/10.1111/1755-0998.12398
Identification of rust fungi (Pucciniales) on species of Allium in Australia
McTaggart, Alistair R., Shivas, Roger G., Doungsa-ard, Chanintorn, Weese, Terri L., Beasley, Dean R., Hall, Barbara H., Metcalf, Dean A. and Geering, Andrew D. W.. 2016. "Identification of rust fungi (Pucciniales) on species of Allium in Australia." Australasian Plant Pathology. 45 (6), pp. 581-592. https://doi.org/10.1007/s13313-016-0445-0
First report of Hemileia wrightiae on Wrightia spp. in Australia
Liberato, J. R. and Shivas, R. G.. 2011. "First report of Hemileia wrightiae on Wrightia spp. in Australia." Australasian Plant Disease Notes. 6 (1), pp. 80-83. https://doi.org/10.1007/s13314-011-0028-4
Ramichloridium spp. on Musa in northern Queensland: introducing Ramichloridium ducassei sp. nov. on leaf streaks of Ducasse banana
Shivas, R. G., Grice, K. R. E. and Young, A. J.. 2011. "Ramichloridium spp. on Musa in northern Queensland: introducing Ramichloridium ducassei sp. nov. on leaf streaks of Ducasse banana." Australasian Plant Pathology. 40 (1), pp. 61-65. https://doi.org/10.1007/s13313-010-0014-x
Green and brown bridges between weeds and crops reveal novel Diaporthe species in Australia
Thompson, S. M., Tan, Y. P., Shivas, R. G., Neate, S. M., Morin, L., Bissett, A. and Aitken, E. A. B.. 2015. "Green and brown bridges between weeds and crops reveal novel Diaporthe species in Australia." Persoonia. 35, pp. 39-49. https://doi.org/10.3767/003158515X687506
Fungal Planet description sheets: 281-319
Crous, P., Wingfield, M., Schumacher, R., Summerell, B., Giraldo, A., Gene, J., Guarro, J., Wanasinghe, D., Hyde, K., Camporesi, E., Jones, E., Thambugala, K., Malysheva, E., Malysheva, V., Acharya, K., Alvarez, J., Alvarado, P., Assefa, A., Barnes, C. W., ..., Groenewald, J.. 2014. "Fungal Planet description sheets: 281-319." Persoonia. 33, pp. 212-292. https://doi.org/10.3767/003158514X685680
Fusarium thapsinum is the dominant species associated with sorghum stalk rot in Queensland and northern New South Wales
Kelly, L., Tan, Y. P., Ryley, M. and Aitken, E.. 2011. "Fusarium thapsinum is the dominant species associated with sorghum stalk rot in Queensland and northern New South Wales." Tran-Nguyen, Lucy (ed.) 4th Asian Conference on Plant Pathology and the 18th Biennial Australasian Plant Pathology Society Conference (ACPP/APPS 2011): New Frontiers in Plant Pathology for Asia and Oceania. Darwin, Australia 26 - 29 Apr 2011 Toowoomba, Australia.
Management of the major foliar diseases of mungbeans and peanuts in Australia
Ryley, M. J. and Tatnell, J. R.. 2011. "Management of the major foliar diseases of mungbeans and peanuts in Australia." Tran-Nguyen, Lucy (ed.) 4th Asian Conference on Plant Pathology and the 18th Biennial Australasian Plant Pathology Society Conference (ACPP/APPS 2011): New Frontiers in Plant Pathology for Asia and Oceania. Darwin, Australia 26 - 29 Apr 2011 Toowoomba, Australia.
Phylogenetic relationships of graminicolous downy mildews based on cox2 sequence data
Thines, Marco, Goker, Markus, Telle, Sabine, Ryley, Malcolm, Mathur, Kusum, Narayana, Yaladabagi D., Spring, Otmar and Thakur, Ram P.. 2008. "Phylogenetic relationships of graminicolous downy mildews based on cox2 sequence data." Mycological Research. 112 (3), pp. 345-351. https://doi.org/10.1016/j.mycres.2007.10.010
Sorghum ergot can develop without local Claviceps africana inoculum from nearby infected plants
Chakraborty, S. and Ryley, M. J.. 2008. "Sorghum ergot can develop without local Claviceps africana inoculum from nearby infected plants." Plant Pathology. 57 (3), pp. 484-492. https://doi.org/10.1111/j.1365-3059.2008.01832.x
Patterns of release of the secondary conidia of Claviceps africana, the sorghum ergot pathogen in Australia
Ryley, M. J. and Chakraborty, S.. 2008. "Patterns of release of the secondary conidia of Claviceps africana, the sorghum ergot pathogen in Australia." Plant Pathology. 57 (3), pp. 473-483. https://doi.org/10.1111/j.1365-3059.2007.01819.x
Reduced fungicide use on a new Australian peanut cultivar, highly resistant to the late leaf spot and rust pathogens
Kelly, Lisa A., Ryley, Malcolm J., Trevorrow, Peter R., Tatnell, Jeffrey R., Nastasi, Charles and Chauhan, Yash. 2012. "Reduced fungicide use on a new Australian peanut cultivar, highly resistant to the late leaf spot and rust pathogens." Australasian Plant Pathology. 41 (4), pp. 359-373. https://doi.org/10.1007/s13313-012-0132-8
Stem cankers on sunflower (Helianthus annuus) in Australia reveal a complex of pathogenic Diaporthe (Phomopsis) species
Thompson, S. M., Tan, Y. P., Young, A. J., Neate, S. M., Aitken, E. A. B. and Shivas, R. G.. 2011. "Stem cankers on sunflower (Helianthus annuus) in Australia reveal a complex of pathogenic Diaporthe (Phomopsis) species." Persoonia. 27, pp. 80-89. https://doi.org/10.3767/003158511X617110
Optimal environmental conditions for the infection and development of Puccinia purpurea on sorghum
White, J. A., Ryley, M. J., George, D. L. and Kong, G. A.. 2014. "Optimal environmental conditions for the infection and development of Puccinia purpurea on sorghum." Australasian Plant Pathology. 43 (4), pp. 447-457. https://doi.org/10.1007/s13313-014-0292-9
A novel technique for the early assessment of sorghum lines for resistance to Fusarium stalk rot
White, Jodie, Ryley, Malcolm and Kelly, Lisa. 2013. "A novel technique for the early assessment of sorghum lines for resistance to Fusarium stalk rot." Summer Grains Conference (ASGC 2013): Innovate, Grow, Prosper. Gold Coast, Australia 17 - 19 Jun 2013
Disease threats to the Australian soybean industry
Ryley, Malcolm. 2013. "Disease threats to the Australian soybean industry." Summer Grains Conference (ASGC 2013): Innovate, Grow, Prosper. Gold Coast, Australia 17 - 19 Jun 2013
Iterative germination and innovative techniques for the production and inoculation of secondary conidia of sorghum ergot (Claviceps africana)
Tonapi, V. A., Ryley, M., Galea, V., Bhuiyan, S. and Wearing, A.. 2009. "Iterative germination and innovative techniques for the production and inoculation of secondary conidia of sorghum ergot (Claviceps africana) ." Archives of Phytopathology and Plant Protection. 42 (3), pp. 248-255. https://doi.org/10.1080/03235400601036612
Effects of conidial concentration and stigma wetness period on infection by the sorghum ergot pathogen Claviceps africana
Bhuiyan, S. A., Ryley, M. J., Galea, V. J., Tay, D. and Lisle, A. T.. 2009. "Effects of conidial concentration and stigma wetness period on infection by the sorghum ergot pathogen Claviceps africana ." Australasian Plant Pathology. 38 (5), pp. 496-499. https://doi.org/10.1071/AP09032
Early harvest and ensilage of forage sorghum infected with ergot (Claviceps africana) reduces the risk of livestock poisoning
Blaney, B. J., Ryley, M. J. and Boucher, B. D.. 2010. "Early harvest and ensilage of forage sorghum infected with ergot (Claviceps africana) reduces the risk of livestock poisoning." Australian Veterinary Journal. 88 (8), pp. 311-312. https://doi.org/10.1111/j.1751-0813.2010.00590.x
First report of the smut fungus Ustanciosporium appendiculatum in Australia
Shivas, R. G., McTaggart, A. R., Ryley, M. J., Scharaschkin, T. and Gambley, C. F.. 2010. "First report of the smut fungus Ustanciosporium appendiculatum in Australia." Australasian Plant Disease Notes. 5 (1), pp. 17-18. https://doi.org/10.1071/DN10007
Molecular phylogenetic analysis of Peronosclerospora (Oomycetes) reveals cryptic species and genetically distinct species parasitic to maize
Telle, Sabine, Shivas, Roger G., Ryley, Malcolm J. and Thines, Marco. 2011. "Molecular phylogenetic analysis of Peronosclerospora (Oomycetes) reveals cryptic species and genetically distinct species parasitic to maize." European Journal of Plant Pathology. 130 (4), pp. 521-528. https://doi.org/10.1007/s10658-011-9772-8
Peronosclerospora australiensis sp. nov. and Peronosclerospora sargae sp. nov., two newly recognised downy mildews in northern Australia, and their biosecurity implications
Shivas, R. G., Ryley, M. J ., Telle, S., Liberato, J. R. and Thines, M.. 2012. "Peronosclerospora australiensis sp. nov. and Peronosclerospora sargae sp. nov., two newly recognised downy mildews in northern Australia, and their biosecurity implications." Australasian Plant Pathology. 41 (2), pp. 125-130. https://doi.org/10.1007/s13313-011-0097-z
First report of the powdery mildew Erysiphe diffusa on soybean in Australia
McTaggart, A. R., Ryley, M. J. and Shivas, R. G.. 2012. "First report of the powdery mildew Erysiphe diffusa on soybean in Australia." Australasian Plant Disease Notes. 7 (1), pp. 127-129. https://doi.org/10.1007/s13314-012-0065-7
New weed hosts of Macrophomina phaseolina in Australia
Fuhlbohm, M. J., Ryley, M. J. and Aitken, E. A. B.. 2012. "New weed hosts of Macrophomina phaseolina in Australia." Australasian Plant Disease Notes. 7 (1), pp. 193-195. https://doi.org/10.1007/s13314-012-0082-6
Early assessment of sorghum lines for resistance to Fusarium stalk rot
White, Jodie and Ryley, Malcolm. 2013. "Early assessment of sorghum lines for resistance to Fusarium stalk rot ." AusSorg 2013. Mt Tamborine, Australia 31 Jul - 01 Aug 2013
Assessing head blight resistance (tolerance) to Fusarium thapsinum in sorghum
Ryley, M. J. and White, Jodie. 2013. "Assessing head blight resistance (tolerance) to Fusarium thapsinum in sorghum." AusSorg 2013. Mt Tamborine, Australia 31 Jul - 01 Aug 2013
Chickpeas! Varietal performance, wet feet and root rot, virus and salinity effects in 2012, Ascochyta management, seed quality, issues in central Queensland and effects of desiccating too early with glyphosate on seed germination
Moore, Kevin, Ryley, Mal and Sharman, Murray. 2013. "Chickpeas! Varietal performance, wet feet and root rot, virus and salinity effects in 2012, Ascochyta management, seed quality, issues in central Queensland and effects of desiccating too early with glyphosate on seed germination." 2013 GRDC Grains Research Update, Northern Region. Goondiwindi, Australia 05 - 06 Mar 2013 Canberra, Australia.
Indigenous fungi as pathogens of crops: some examples from Australia
Ryley, Malcolm and Shivas, Roger. 2013. "Indigenous fungi as pathogens of crops: some examples from Australia." Asian Mycological Congress 2013 and 13th International Marine and Freshwater Mycology Symposium (AMC 2013). Beijing, China 19 - 23 Aug 2103 Beijing, China.
Response of chickpea genotype to Phytophthora root rot, PRR (Phytophthora medicaginis)
Moore, Kevin, Ryley, Malcolm, Hobson, Kristy, Harden, Steve, Martin, William, King, Kris, Nash, Paul and Chiplin, Gail. 2013. "Response of chickpea genotype to Phytophthora root rot, PRR (Phytophthora medicaginis)." Pulse Breeding Australia Inaugural Conference (PBA 2013): Expanding Horizons. Adelaide, Australia 20 - 23 Oct 2013
Infection of mungbean seed is more likely to result from localised pod infection than from systemic plant infection
Fuhlbohm, M. J., Ryley, M. J. and Aitken, E. A. B.. 2013. "Infection of mungbean seed is more likely to result from localised pod infection than from systemic plant infection." Plant Pathology. 62 (6), pp. 1271-1284. https://doi.org/10.1111/ppa.12047
Phyllosticta spp. on cultivated Citrus in Australia
Miles, A. K., Tan, Y. P., Tan, M. K., Donovan, N. J., Ghalayini, A. and Drenth, A.. 2013. "Phyllosticta spp. on cultivated Citrus in Australia ." Australasian Plant Pathology. 42 (4), pp. 461-467. https://doi.org/10.1007/s13313-013-0208-0
Yield losses in grain sorghum due to rust infection
White, Jodie A., Ryley, Malcolm J., George, Doug L., Kong, Gary A. and White, Simon C.. 2012. "Yield losses in grain sorghum due to rust infection ." Australasian Plant Pathology. 41 (1), pp. 85-91. https://doi.org/10.1007/s13313-011-0093-3
Mechanical harvesting reduces sphacelia/sclerote levels of claviceps africana
Ryley, M. J., Jensen, T. and Kyei, A. N.. 2003. "Mechanical harvesting reduces sphacelia/sclerote levels of claviceps africana." International Sorghum and Millets Newsletter.
Xanthones from a microfungus of the genus Xylaria
Healy, Peter C., Hocking, Ailsa, Tran-Dinh, Nai, Pitt, John I., Shivas, Roger G., Mitchell, Jennifer K., Kotiw, Mike and Davis, Rohan A.. 2004. "Xanthones from a microfungus of the genus Xylaria." Phytochemistry: the international journal of plant chemistry, plant biochemistry and molecular biology. 65 (16), pp. 2373-2378. https://doi.org/10.1016/j.phytochem.2004.07.019
Phomoxins B and C: polyketides from an endophytic fungus of the genus eupenicillium
Davis, Rohan A., Andjic, Vesna, Kotiw, Michael and Shivas, Roger G.. 2005. "Phomoxins B and C: polyketides from an endophytic fungus of the genus eupenicillium." Phytochemistry: the international journal of plant chemistry, plant biochemistry and molecular biology. 66 (23), pp. 2771-2775. https://doi.org/10.1016/j.phytochem.2005.09.004
A case for re-inventory of Australia's plant pathogens
Hyde, K. D., Chomnunti, P., Crous, P. W., Groenewald, J. Z., Damm, U., Ko, T. W. Ko, Shivas, R. G., Summerell, B. A. and Tan, Y. P.. 2010. "A case for re-inventory of Australia's plant pathogens." Persoonia. 25, pp. 50-60. https://doi.org/10.3767/003158510X548668
Austropleospora osteospermi gen. et sp. nov. and its host specificity and distribution on Chrysanthemoides monilifera ssp. rotundata in Australia
Morin, Louise, Shivas, R. G., Piper, M. C. and Tan, Y. P.. 2010. "Austropleospora osteospermi gen. et sp. nov. and its host specificity and distribution on Chrysanthemoides monilifera ssp. rotundata in Australia ." Fungal Diversity. 40 (1), pp. 65-74. https://doi.org/10.1007/s13225-009-0007-7
Random Mutagenesis Identifies Novel Genes Involved in the Secretion of Antimicrobial, Cell Wall-Lytic Enzymes by Lactococcus lactis
Tan, Yu Pei, Giffard, Philip M., Barry, Daniel G., Huston, Wilhelmina M. and Turner, Mark S.. 2008. "Random Mutagenesis Identifies Novel Genes Involved in the Secretion of Antimicrobial, Cell Wall-Lytic Enzymes by Lactococcus lactis." Applied and Environmental Microbiology. 74 (24), pp. 7490-7496. https://doi.org/10.1128/AEM.00767-08
Inactivation of an Iron Transporter in Lactococcus lactis Results in Resistance to Tellurite and Oxidative Stress
Turner, Mark S., Tan, Yu Pei and Giffard, Philip M.. 2007. "Inactivation of an Iron Transporter in Lactococcus lactis Results in Resistance to Tellurite and Oxidative Stress." Applied and Environmental Microbiology. 73 (19), pp. 6144-6149. https://doi.org/10.1128/AEM.00413-07