First molecular phylogeny of mycoparasitic species of Sphaerellopsis isolated from rust fungi in Australia

Article

Risteski, J., Kiss, L., Idnurm, A., Shivas, R., Tan, Y., Sun, J. and Vaghefi, N.. 2025. "First molecular phylogeny of mycoparasitic species of Sphaerellopsis isolated from rust fungi in Australia." Mycological Progress: international journal of fungal sciences. 24. https://doi.org/10.1007/s11557-025-02075-2
Article Title

First molecular phylogeny of mycoparasitic species of Sphaerellopsis
isolated from rust fungi in Australia

ERA Journal ID2503
Article CategoryArticle
AuthorsRisteski, J., Kiss, L., Idnurm, A., Shivas, R., Tan, Y., Sun, J. and Vaghefi, N.
Journal TitleMycological Progress: international journal of fungal sciences
Journal Citation24
Article Number57
Number of Pages6
Year2025
PublisherSpringer
ISSN1617-416X
1861-8952
Digital Object Identifier (DOI)https://doi.org/10.1007/s11557-025-02075-2
Web Address (URL)https://link.springer.com/article/10.1007/s11557-025-02075-2
Abstract

Three species, Sphaerellopsis filum, S. macroconidialis, and S. paraphysata, from Queensland and Victoria, Australia,
were identified and characterised by multilocus sequence analyses. This study clarifies earlier reports of Sphaerellopsis in
Australia and provides the first report of S. filum in Australia. We also confirm the presence of S. macroconidialis and S.
paraphysata in Australia. A single-locus phylogeny based on the internal transcribed spacer (ITS) region of the ribosomal
DNA (rDNA) provided sufficient resolution for species-level identification and yielded a topology consistent with that of
the combined dataset of ITS, large subunit of the rDNA, and the RNA polymerase II second largest subunit. The high intron
variability in the translation elongation factor 1-α region among Sphaerellopsis spp. made it unsuitable for phylogenetic
analysis. The specimens and data generated here lay the groundwork for future studies into the evolution and molecular basis
of mycoparasitism in Sphaerellopsis.

KeywordsRust hyperparasite · Sphaerellopsis filum · S. paraphysata · S. macroconidialis
Article Publishing Charge (APC) FundingProject Funding
Contains Sensitive ContentDoes not contain sensitive content
ANZSRC Field of Research 2020309999. Other agricultural, veterinary and food sciences not elsewhere classified
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Prasannath, Kandeeparoopan, Shivas, Roger G., Galea, Victor J. and Akinsanmi, Olufemi A.. 2021. "Novel Botrytis and Cladosporium Species Associated with Flower Diseases of Macadamia in Australia." Journal of Fungi. 7 (11), pp. 1-17. https://doi.org/10.3390/jof7110898
What is the role of the nitrate reductase (euknr) gene in fungi that live in nitrate-free environments? A targeted gene knock-out study in Ampelomyces mycoparasites
Nemeth, Mark Z., Li, Guofen, Seress, Diana, Pintye, Alexandra, Molnar, Orsolya, Kovacs, Gabor M., Kiss, Levente and Gorfer, Markus. 2021. "What is the role of the nitrate reductase (euknr) gene in fungi that live in nitrate-free environments? A targeted gene knock-out study in Ampelomyces mycoparasites." Fungal Biology. 125 (11), pp. 905-913. https://doi.org/10.1016/j.funbio.2021.06.004
Hidden diversity of powdery mildews belonging to the recently re-discovered genus Salmonomyces
Jin, Dan-Ni, Kiss, Levente, Takamatsu, Susumu, Zhang, Zhao-Yang, Cabrera de Alvarez, Maria Graciela, Li, Zhuang, Li, Yu and Liu, Shu-Yan. 2021. "Hidden diversity of powdery mildews belonging to the recently re-discovered genus Salmonomyces." Mycological Progress: international journal of fungal sciences. 20 (9), pp. 1009-1018. https://doi.org/10.1007/s11557-021-01679-8
Ampelomyces strains isolated from diverse powdery mildew hosts in Japan: Their phylogeny and mycoparasitic activity, including timing and quantifying mycoparasitism of Pseudoidium neolycopersici on tomato
Nemeth, Mark Z., Mizuno, Yuusaku, Kobayashi, Hiroki, Seress, Diana, Shishido, Naruki, Kimura, Yutaka, Takamatsu, Susumu, Suzuki, Tomoko, Takikawa, Yoshihiro, Kakutani, Koji, Matsuda, Yoshinori, Kiss, Levente and Nonomura, Teruo. 2021. "Ampelomyces strains isolated from diverse powdery mildew hosts in Japan: Their phylogeny and mycoparasitic activity, including timing and quantifying mycoparasitism of Pseudoidium neolycopersici on tomato." PLoS One. 16 (5), pp. 1-20. https://doi.org/10.1371/journal.pone.0251444
One Crop Disease, How Many Pathogens? Podosphaera xanthii and Erysiphe vignae sp. nov. Identified as the Two Species that Cause Powdery Mildew of Mungbean (Vigna radiata) and Black Gram (V. mungo) in Australia
Kelly, Lisa A., Vaghefi, Niloofar, Bransgrove, Kaylene, Fechner, Nigel A., Stuart, Kara, Pandey, Abhay K., Sharma, Mamta, Nemeth, Mark Z., Liu, Shu-Yan, Tang, Shu-Rong, Nair, Ramakrishnan M., Douglas, Colin A. and Kiss, Levente. 2021. "One Crop Disease, How Many Pathogens? Podosphaera xanthii and Erysiphe vignae sp. nov. Identified as the Two Species that Cause Powdery Mildew of Mungbean (Vigna radiata) and Black Gram (V. mungo) in Australia." Phytopathology: International Journal of the American Phytopathological Society. 111 (7), pp. 1193-1206. https://doi.org/10.1094/PHYTO-12-20-0554-R
The “Bipartite” Structure of the First Genome of Ampelomyces quisqualis, a Common Hyperparasite and Biocontrol Agent of Powdery Mildews, May Point to Its Evolutionary Origin from Plant Pathogenic Fungi
Huth, Lauren, Ash, Gavin J., Idnurm, Alexander, Kiss, Levente and Vaghefi, Niloofar. 2021. "The “Bipartite” Structure of the First Genome of Ampelomyces quisqualis, a Common Hyperparasite and Biocontrol Agent of Powdery Mildews, May Point to Its Evolutionary Origin from Plant Pathogenic Fungi." Genome Biology and Evolution. 13 (8), pp. 1-7. https://doi.org/10.1093/gbe/evab182
Redox and hormonal changes in the transcriptome of grape (Vitis vinifera) berries during natural noble rot development
Pogany, Miklós, Dankó, Tamás, Hegyi-Kaló, Júlia, Kámán-Tóth, Evelin, Szám, Dorottya, Hamow, Kamirán Áron, Kalapos, Balázs, Kiss, Levente, Fodor, József, Gullner, Gábor, Vaczy, Kálmán Zoltán and Barna, Balázs. 2022. "Redox and hormonal changes in the transcriptome of grape (Vitis vinifera) berries during natural noble rot development." Plants. 11 (7). https://doi.org/10.3390/plants11070864
IMA genome‑F17: Draft genome sequences of an Armillaria species from Zimbabwe, Ceratocystis colombiana, Elsinoë necatrix, Rosellinia necatrix, two genomes of Sclerotinia minor, short‑read genome assemblies and annotations of four Pyrenophora teres isolates from barley grass, and a long-read genome assembly of Cercospora zeina
Wingfield, Brenda D., Berger, Dave K., Coetzee, Martin P. A., Duong, Tuan A., Martin, Anke, Pham, Nam Q., van denBerg, Noelani, Wilken, P. Markus, Arun‑Chinnappa, Kiruba Shankari., Barnes, Irene, Buthelezi, Sikelela, Dahanayaka, Buddhika Amarasinghe, Durán, Alvaro, Engelbrecht, Juanita, Feurtey, Alice, Fourie, Arista, Fourie, Gerda, Hartley, Jesse, Kabwe, Eugene N. K., ..., Wingfield, Michael J.. 2022. "IMA genome‑F17: Draft genome sequences of an Armillaria species from Zimbabwe, Ceratocystis colombiana, Elsinoë necatrix, Rosellinia necatrix, two genomes of Sclerotinia minor, short‑read genome assemblies and annotations of four Pyrenophora teres isolates from barley grass, and a long-read genome assembly of Cercospora zeina ." IMA Fungus: the global mycological journal. 13 (1). https://doi.org/10.1186/s43008-022-00104-3
Fungal Pathogens of Navua sedge (Cyperus aromaticus) in equatorial Africa as prospective weed biological control agents
Dhileepan, Kunjithapatham, Musili, Paul Mutuku, Ntandu, John Elia, Chukwuma, Emmanuel, Kurose, Daisuke, Seier, Marion Karin, Ellison, Carol Ann and Shivas, Roger Graham. 2022. "Fungal Pathogens of Navua sedge (Cyperus aromaticus) in equatorial Africa as prospective weed biological control agents." Biocontrol Science and Technology. 32 (1), pp. 114-120. https://doi.org/10.1080/09583157.2021.1968344
Niche differentiation within a cryptic pathogen complex: climatic drivers and hyperparasitism at multiple spatial scales
Faticov, Maria, Desprez-Loustau, Marie-Laure, Kiss, Levente, Massot, M., d’Arcier, Julie Faivre, Mutz, Jessie, Nemeth, Mark Z., Roslin, Tomas and Tack, Ayco J. M.. 2022. "Niche differentiation within a cryptic pathogen complex: climatic drivers and hyperparasitism at multiple spatial scales ." Ecography: pattern and diversity in ecology. 2022 (2). https://doi.org/10.1111/ecog.06062
Beyond Nuclear Ribosomal DNA Sequences: Evolution, Taxonomy, and Closest Known Saprobic Relatives of Powdery Mildew Fungi (Erysiphaceae) Inferred From Their First Comprehensive Genome-Scale Phylogenetic Analyses
Vaghefi, Niloofar, Kusch, Stefan, Nemeth, Mark Z., Seress, Diana, Braun, Uwe, Takamatsu, Susumu, Panstruga, Ralph and Kiss, Levente. 2022. "Beyond Nuclear Ribosomal DNA Sequences: Evolution, Taxonomy, and Closest Known Saprobic Relatives of Powdery Mildew Fungi (Erysiphaceae) Inferred From Their First Comprehensive Genome-Scale Phylogenetic Analyses." Frontiers in Microbiology. 13. https://doi.org/10.3389/fmicb.2022.903024
Fungal Planet description sheets: 1436–1477
Tan, Y.P., Bishop-Hurley, S.L., Shivas, R.G., Cowan, D.A., Maggs-Kolling, G., Maharachchikumbura, S.S.N., Pinruan, U., Bransgrove, K.L., De la Pena-Lastra, S., Larsson, E., Lebel, T., Mahadevakumar, S., Mateos, A., Osieck, E.R., Rigueiro-Rodriguez, A., Sommai, S., Ajithkumar, K., Akulov, A., Anderson, F.E., ..., Crous, P.W.. 2022. "Fungal Planet description sheets: 1436–1477." Persoonia. 49, pp. 261-350. https://doi.org/10.3767/persoonia.2022.49.08
Draft Genome Sequences of Dickeya Species Associated with Soft Rot Diseases in Pineapple (Ananas comosus) and Banana (Musa spp.)
Young, Anthony J., Birt, Henry W. G., Vaghefi, Niloofar, Hoelzle, Robert D. and Dennis, Paul G.. 2022. "Draft Genome Sequences of Dickeya Species Associated with Soft Rot Diseases in Pineapple (Ananas comosus) and Banana (Musa spp.)." Microbiology Resource Announcements. 11 (11). https://doi.org/10.1128/mra.00716-22
Population Structure of Pyrenophora teres f. teres Barley Pathogens From Different Continents
Dahanayaka, Buddhika A., Vaghefi, Niloofar, Knight, Noel L., Bakonyi, Jozsef, Prins, Renee, Seress, Diana, Snyman, Lisle and Martin, Anke. 2021. "Population Structure of Pyrenophora teres f. teres Barley Pathogens From Different Continents." Phytopathology: International Journal of the American Phytopathological Society. 111 (11), pp. 2118-2129. https://doi.org/10.1094/phyto-09-20-0390-r
Investigating In Vitro Mating Preference Between or Within the Two Forms of Pyrenophora teres and Its Hybrids
Dahanayaka, Buddhika A., Vaghefi, Niloofar, Snyman, Lisle and Martin, Anke. 2021. "Investigating In Vitro Mating Preference Between or Within the Two Forms of Pyrenophora teres and Its Hybrids." Phytopathology: International Journal of the American Phytopathological Society. 111 (12), pp. 2278-2286. https://doi.org/10.1094/phyto-02-21-0058-r
Fungal Planet description sheets: 1182-1283
Crous, P. W., Cowan, D. A., Maggs-Kolling, G., Yilmaz, N., Thangavel, R., Wingfield, M. J., Noordeloos, M. E., Dima, B., Brandrud, T. E., Jansen, G. M., Morozova, O. V., Vila, J., Shivas, R. G., Tan, Y. P., Bishop-Hurley, S., Lacey, E., Marney, T. S., Larsson, E., Le Floch, G., ..., Groenewald, J. Z.. 2021. "Fungal Planet description sheets: 1182-1283." Persoonia. 46, pp. 313-528. https://doi.org/10.3767/persoonia.2021.46.11
Genome-Wide Association and Selective Sweep Studies Reveal the Complex Genetic Architecture of DMI Fungicide Resistance in Cercospora beticola
Spanner, Rebecca, Taliadoros, Demetris, Richards, Jonathan, Rivera-Varas, Viviana, Neubauer, Jonathan, Natwick, Mari, Hamilton, Olivia, Vaghefi, Niloofar, Pethybridge, Sarah, Secor, Gary A., Friesen, Timothy L., Stukenbrock, Eva H. and Bolton, Melvin D.. 2021. "Genome-Wide Association and Selective Sweep Studies Reveal the Complex Genetic Architecture of DMI Fungicide Resistance in Cercospora beticola." Genome Biology and Evolution. 13 (9), pp. 1-17. https://doi.org/10.1093/gbe/evab209
Hidden diversity of Macrophomina associated with broadacre and horticultural crops in Australia
Poudel, Barsha, Shivas, Roger G., Adorada, Dante L., Barbetti, Martin J., Bithell, Sean L., Kelly, Lisa A., Moore, Natalie, Sparks, Adam H., Tan, Yu Pei, Thomas, Geoff, van Leur, Joop and Vaghefi, Niloofar. 2021. "Hidden diversity of Macrophomina associated with broadacre and horticultural crops in Australia." European Journal of Plant Pathology. 161, pp. 1-23. https://doi.org/10.1007/s10658-021-02300-0
Fusarium: more than a node or a foot-shaped basal cell
Crous, P. W., Lombard, L., Sandoval-Denis, M., Seifert, K. A., Schroers, H.-J., Chaverri, P., Gene, J., Guarro, J., Hirooka, Y., Bensch, K., Kema, G. H. J., Lamprecht, S. C., Cai, L., Rossman, A. Y., Stadler, M., Summerbell, R. C., Taylor, J. W., Ploch, S., Visagie, C. M., ..., Thines, M.. 2021. "Fusarium: more than a node or a foot-shaped basal cell." Studies in Mycology. 98, pp. 1-184. https://doi.org/10.1016/j.simyco.2021.100116
Phylogeny of cercosporoid fungi (Mycosphaerellaceae, Mycosphaerellales) from Hawaii and New York reveals novel species within the Cercospora beticola complex
Vaghefi, Niloofar, Shivas, Roger G., Sharma, Sandeep, Nelson, Scot C. and Pethybridge, Sarah J.. 2021. "Phylogeny of cercosporoid fungi (Mycosphaerellaceae, Mycosphaerellales) from Hawaii and New York reveals novel species within the Cercospora beticola complex." Mycological Progress: international journal of fungal sciences. 20 (3), pp. 261-287. https://doi.org/10.1007/s11557-021-01666-z
Australia: A Continent Without Native Powdery Mildews? The First Comprehensive Catalog Indicates Recent Introductions and Multiple Host Range Expansion Events, and Leads to the Re-discovery of Salmonomyces as a New Lineage of the Erysiphales
Kiss, Levente, Vaghefi, Niloofar, Bransgrove, Kaylene, Dearnaley, John D. W., Takamatsu, Susumu, Tan, Yu Pei, Marston, Craig, Liu, Shu-Yan, Jin, Dan-Ni, Adorada, Dante L., Bailey, Jordan, Cabrera de Alvarez, Maria Graciela, Daly, Andrew, Dirchwolf, Pamela Maia, Jones, Lynne, Nguyen, Thuan Dat, Edwards, Jacqueline, Ho, Wellcome, Kelly, Lisa, ..., Braun, Uwe. 2020. "Australia: A Continent Without Native Powdery Mildews? The First Comprehensive Catalog Indicates Recent Introductions and Multiple Host Range Expansion Events, and Leads to the Re-discovery of Salmonomyces as a New Lineage of the Erysiphales." Frontiers in Microbiology. 11, pp. 1-31. https://doi.org/10.3389/fmicb.2020.01571
Broad and narrow host ranges in resolved species of Cintractia limitata s. lat. (Anthracoideaceae, Ustilaginomycotina) on Cyperus
Kruse, J., McTaggart, A. R., Dhileepan, K., Musili, P. M., Mutie, F. M., Ntandu, J. E., Edogbanya, P. R. O., Chukwuma, E. C. and Shivas, R. G.. 2021. "Broad and narrow host ranges in resolved species of Cintractia limitata s. lat. (Anthracoideaceae, Ustilaginomycotina) on Cyperus." Mycological Progress: international journal of fungal sciences. 20, pp. 191-201. https://doi.org/10.1007/s11557-020-01664-7
A fresh look at grape powdery mildew (Erysiphe necator) A and B genotypes revealed frequent mixed infections and only B genotypes in flag shoot samples
Csikos, Anett, Nemeth, Mark Z., Frenkel, Omer, Kiss, Levente and Vaczy, Kalman Zoltan. 2020. "A fresh look at grape powdery mildew (Erysiphe necator) A and B genotypes revealed frequent mixed infections and only B genotypes in flag shoot samples." Plants. 9 (9), pp. 1-12. https://doi.org/10.3390/plants9091156
Fungal Planet description sheets: 1112–1181
Crous, P. W., Cowan, D. A., Maggs-Kolling, G., Yilmaz, N., Larsson, E., Angelini, C., Brandrud, T. E., Dearnaley, J. D. W., Dima, B., Dovana, F., Fechner, N., Garcia, D., Gene, J., Halling, R. E., Houbraken, J., Leonard, P., Luangsa-ard, J. J., Noisripoom, W., Rea-Ireland, A. E., ..., Groenewald, J. Z.. 2020. "Fungal Planet description sheets: 1112–1181." Persoonia. 45, pp. 251-409. https://doi.org/10.3767/persoonia.2020.45.10
Whole-Genome Data from Curtobacterium flaccumfaciens pv. flaccumfaciens Strains Associated with Tan Spot of Mungbean and Soybean Reveal Diverse Plasmid Profiles
Vaghefi, Niloofar, Adorada, Dante L., Huth, Lauren, Kelly, Lisa A., Poudel, Barsha, Young, Anthony and Sparks, Adam H.. 2021. "Whole-Genome Data from Curtobacterium flaccumfaciens pv. flaccumfaciens Strains Associated with Tan Spot of Mungbean and Soybean Reveal Diverse Plasmid Profiles." Molecular Plant-Microbe Interactions. 34 (10), pp. 1216-1222. https://doi.org/10.1094/MPMI-05-21-0116-A
Characterising the genotypic diversity of Curtobacterium flaccumfaciens pv. Flaccumfaciens, the cause of tan spot on mungbean
Vaghefi, Niloofar, Adorada, Dante, Adorada, Encarnacion, Kelly, Lisa, Young, Anthony and Sparks, Adam. 2019. "Characterising the genotypic diversity of Curtobacterium flaccumfaciens pv. Flaccumfaciens, the cause of tan spot on mungbean." 2019 Australian Summer Grains Conference: Enduring Farm Profitability (ASCG 2019). Gold Coast, Australia 08 - 10 Jul 2019
What can we learn from population genomics studies of Curtobacterium flaccumfaciens pv. flaccumfaciens, the cause of tan spot on mungbean?
Vaghefi, N., Adorada, D., Adorada, E., Kelly, L., Young, A. and Sparks, A.. 2019. "What can we learn from population genomics studies of Curtobacterium flaccumfaciens pv. flaccumfaciens, the cause of tan spot on mungbean?" 22nd Biennial Australasian Plant Pathology Society Conference (APPS 2019): Strong Foundations, Future Innovations. Melbourne, Australia 25 - 28 Nov 2019
A dynamic portal for a community-driven, continuously updated classification of Fungi and fungus-like organisms: outlineoffungi.org
Wijayawardene, N. N, Hyde, K. D, Dai, D. Q, Tang, L. Z, Aptroot, A, Castaneda-Ruiz, R. F, Druzhinina, I. S, Cai, F, Ekanayaka, A. H, Erdogdu, M, Fiuza, P. O, Gentekaki, E, Goto, B. T, Haelewaters, D, Hongsanan, S, Jeewon, R, Kirk, P. M, Jayalal, R. G. U, Karunarathna, S. C, ..., Thines, M. 2020. "A dynamic portal for a community-driven, continuously updated classification of Fungi and fungus-like organisms: outlineoffungi.org." Mycosphere Online: Journal of Fungal Biology. 11 (1), pp. 1514-1526. https://doi.org/10.5943/mycosphere/11/1/11
Draft genome resource for Macrophomina phaseolina associated with charcoal rot in sorghum
Purushotham, Neeraj, Jones, Ashley, Poudel, Barsha, Nasim, Jamila, Adorada, Dante, Sparks, Adam, Schwessinger, Benjamin and Vaghefi, Niloofar. 2020. "Draft genome resource for Macrophomina phaseolina associated with charcoal rot in sorghum." Molecular Plant-Microbe Interactions. 33 (5), pp. 724-726. https://doi.org/10.1094/MPMI-12-19-0356-A
Fungal Planet description sheets: 1042-1111
Crous, P. W., Wingfield, M. J., Chooi, Y.-H., Gilchrist, C. L. M., Lacey, E., Pitt, J. I., Roets, F., Swart, W. J., Cano-Lira, J. F., Valenzuela-Lopez, N., Hubka, V., Shivas, R. G., Stchigel, A. M., Holdom, D. G., Jurjevic, Z., Kachalkin, A. V., Lebel, T., Lock, C., Martin, M. P., ..., Groenewald, J. Z.. 2020. "Fungal Planet description sheets: 1042-1111." Persoonia. 44, pp. 301-459. https://doi.org/10.3767/persoonia.2020.44.11
Genome mining of the citrus pathogen Elsinoe fawcettii; prediction and prioritisation of candidate effectors, cell wall degrading enzymes and secondary metabolite gene clusters
Jeffress, Sarah, Arun-Chinnappa, Kiruba, Stodart, Ben, Vaghefi, Niloofar, Tan, Yu Pei and Ash, Gavin. 2020. "Genome mining of the citrus pathogen Elsinoe fawcettii; prediction and prioritisation of candidate effectors, cell wall degrading enzymes and secondary metabolite gene clusters." PLoS One. 15 (5). https://doi.org/10.1371/journal.pone.0227396
A Short-Read Genome Assembly Resource for Leveillula taurica Causing Powdery Mildew Disease of Sweet Pepper (Capsicum annuum)
Kusch, Stefan, Nemeth, Mark Z., Vaghefi, Niloofar, Ibrahim, Heba M.M., Panstruga, Ralph and Kiss, Levente. 2020. "A Short-Read Genome Assembly Resource for Leveillula taurica Causing Powdery Mildew Disease of Sweet Pepper (Capsicum annuum)." Molecular Plant-Microbe Interactions. 33 (6), pp. 782-786. https://doi.org/10.1094/MPMI-02-20-0029-A
Red root rot of Vicia sativa caused by Atractiella rhizophila
Allen, Robert N., Bransgrove, Kaylene and Shivas, Roger G.. 2020. "Red root rot of Vicia sativa caused by Atractiella rhizophila." European Journal of Plant Pathology. 157 (2), pp. 293-297. https://doi.org/10.1007/s10658-020-01985-z
Re-visiting management options for charcoal rot in sorghum (updated)
Adorada, Dante, Vaghefi, Niloofar and Sparks, Adam. 2019. "Re-visiting management options for charcoal rot in sorghum (updated)." GRDC Communities.
Commelinaceomyces, gen. nov., for four clavicipitaceous species misplaced in Ustilago that infect Commelinaceae
Tanaka, Eiji, Shrestha, Bhushan and Shivas, Roger G.. 2020. "Commelinaceomyces, gen. nov., for four clavicipitaceous species misplaced in Ustilago that infect Commelinaceae." Mycologia. 112 (3), pp. 649-660. https://doi.org/10.1080/00275514.2020.1745524
Phomopsis husk rot of macadamia in Australia and South Africa caused by novel Diaporthe species
Wrona, Christopher J., Mohankumar, Vheena, Schoeman, Maritha H., Tan, Yu P., Shivas, Roger G.S., Jeff-Ego, Olumide S. and Akinsanmi, Olufemi A.. 2020. "Phomopsis husk rot of macadamia in Australia and South Africa caused by novel Diaporthe species." Plant Pathology. 69 (5), pp. 911-921. https://doi.org/10.1111/ppa.13170
Phylogeny and pathogenicity of Stemphylium species associated with Fabaceae in Australia
Vaghefi, Niloofar, Thompson, Susan M., Kimber, Rohan B.E., Thomas, Geoff J., Kant, Pragya, Barbetti, Martin J. and van Leur, Joop A.G.. 2020. "Phylogeny and pathogenicity of Stemphylium species associated with Fabaceae in Australia." Mycological Progress: international journal of fungal sciences. 19, pp. 381-396. https://doi.org/10.1007/s11557-020-01566-8
Fungal planet description sheets: 951–1041
Crous, P. W., Wingfield, M. J., Lombard, L., Roets, F., Swart, W. J., Alvarado, P., Carnegie, A. J., Moreno, G., Luangsa-ard, J., Thangavel, R., Alexandrova, A. V., Baseia, I. G., Bellanger, J. -M., Bessette, A. E., Bessette, A. R., De la Pena-Lastra, S., Garcia, D., Gene, J., Pham, T. H. G., ..., Groenewald, J. Z.. 2019. "Fungal planet description sheets: 951–1041." Persoonia. 43, pp. 223-425. https://doi.org/10.3767/persoonia.2019.43.06
The Parauncinula polyspora Draft Genome Provides Insights into Patterns of Gene Erosion and Genome Expansion in Powdery Mildew Fungi
Frantzeskakis, Lamprinos, Nemeth, Mark Z., Barsoum, Mirna, Kusch, Stefan, Kiss, Levente, Takamatsu, Susumu and Panstruga, Ralph. 2019. "The Parauncinula polyspora Draft Genome Provides Insights into Patterns of Gene Erosion and Genome Expansion in Powdery Mildew Fungi." mBio. 10 (5), pp. 1-17. https://doi.org/10.1128/mBio.01692-19
Genetic structure of a Pyrenophora teres f. teres population over time in an Australian barley field as revealed by Diversity Arrays Technology markers
Poudel, B., Vaghefi, N., McLean, M. S., Platz, G. J., Sutherland, M. W. and Martin, Anke. 2019. "Genetic structure of a Pyrenophora teres f. teres population over time in an Australian barley field as revealed by Diversity Arrays Technology markers." Plant Pathology. 68 (7), pp. 1331-1336. https://doi.org/10.1111/ppa.13035
Pathogenicity and copper tolerance in Australian Xanthomonas species associated with bacterial leaf spot
Roach, R., Mann, R., Gambley, C. G., Shivas, R. G., Chapman, T. and Rodoni, B.. 2020. "Pathogenicity and copper tolerance in Australian Xanthomonas species associated with bacterial leaf spot." Crop Protection. 127, pp. 1-11. https://doi.org/10.1016/j.cropro.2019.104923
Genera of phytopathogenic fungi: GOPHY 3
Marin-Felix, Y., Hernandez-Restrepo, M., Iturrieta-Gonzalez, I., Garcia, D., Gene, J., Groenewald, J. Z., Cai, L., Chen, Q., Quaedvlieg, W., Schumacher, R. K., Taylor, P. W. J., Ambers, C., Bonthond, G., Edwards, J., Krueger-Hadfield, S. A., Luangsa-ard, J. J., Morton, L., Moslemi, A., Sandoval-Denis, M., ..., Crous, P. W.. 2019. "Genera of phytopathogenic fungi: GOPHY 3." Studies in Mycology. 94, pp. 1-124. https://doi.org/10.1016/j.simyco.2019.05.001
Genetic diversity and structure in regional Cercospora beticola populations from Beta vulgaris ssp. vulgaris suggest two clusters of separate origin
Knight, Noel L., Vaghefi, Niloofar, Kikkert, Julie R., Bolton, Melvin D., Secor, Gary A., Rivera, Viviana V., Hanson, Linda E., Nelson, Scot C. and Pethybridge, Sarah J.. 2019. "Genetic diversity and structure in regional Cercospora beticola populations from Beta vulgaris ssp. vulgaris suggest two clusters of separate origin." Phytopathology: International Journal of the American Phytopathological Society. 109 (7), pp. 1280-1292. https://doi.org/10.1094/PHYTO-07-18-0264-R
Diversity of Moesziomyces (Ustilaginales, Ustilaginomycotina) on Echinochloa and Leersia (Poaceae)
Li, Ying-Ming, Shivas, Roger G., Li, Bao-Ju and Cai, Lei. 2019. "Diversity of Moesziomyces (Ustilaginales, Ustilaginomycotina) on Echinochloa and Leersia (Poaceae)." MycoKeys. 52, pp. 1-16. https://doi.org/10.3897/mycokeys.52.30461
Fungal planet description sheets: 868–950
Crous, P. W., Carnegie, A. J., Wingfield, M. J., Sharma, R., Mughini, G., Noordeloos, M. E., Santini, A., Shouche, Y. S., Bezerra, J. D. P., Dima, B., Guarnaccia, V., Imrefi, I., Jurjevic, Z., Knapp, D. G., Kovacs, G. M., Magista, D., Perrone, G., Rama, T., Rebriev, Y. A., ..., Groenewald, J. Z.. 2019. "Fungal planet description sheets: 868–950." Persoonia. 42, pp. 291-473. https://doi.org/10.3767/persoonia.2019.42.11
Australian cultures of Botryosphaeriaceae held in Queensland and Victoria plant pathology herbaria revisited
Tan, Yu Pei, Shivas, Roger G., Marney, Thomas S., Edwards, Jacqueline, Dearnaley, John, Jami, Fahimeh and Burgess, Treena I.. 2019. "Australian cultures of Botryosphaeriaceae held in Queensland and Victoria plant pathology herbaria revisited." Australasian Plant Pathology. 48 (1), pp. 25-34. https://doi.org/10.1007/s13313-018-0559-7
Biodiscovery and the Queensland Plant Pathology Herbarium
Shivas, Roger G., Beasley, Dean R., Bransgrove, Kaylene, Tan, Yu Pei and Bulow, Geoff. 2019. "Biodiscovery and the Queensland Plant Pathology Herbarium." Microbiology Australia. 40 (3), pp. 134-137. https://doi.org/10.1071/MA19036
One stop shop II: taxonomic update with molecular phylogeny for important phytopathogenic genera: 26–50 (2019)
Jayawardena, Ruvishika S., Hyde, Kevin D., Jeewon, Rajesh, Ghobad-Nejhad, Masoomeh, Wanasinghe, Dhanushka N., Liu, NingGuo, Phillips, Alan J. L., Oliveira-Filho, Jose Ribamar C., da Silva, Gladstone A., Gibertoni, Tatiana B., Abeywikrama, P., Carris, L. M., Chethana, K. W. T., Dissanayake, A. J., Hongsanan, S., Jayasiri, S. C., McTaggart, A. R., Perera, R. H., Phutthacharoen, K., ..., Kang, Ji-Chuan. 2019. "One stop shop II: taxonomic update with molecular phylogeny for important phytopathogenic genera: 26–50 (2019)." Fungal Diversity. 94 (1), pp. 41-129. https://doi.org/10.1007/s13225-019-00418-5
Phylogeny and taxonomy of Golovinomyces orontii revisited
Braun, U., Shin, H. D., Takamatsu, S., Meeboon, J., Kiss, L., Lebeda, A., Kitner, M. and Gotz, M.. 2019. "Phylogeny and taxonomy of Golovinomyces orontii revisited." Mycological Progress: international journal of fungal sciences. 18 (3), pp. 335-357. https://doi.org/10.1007/s11557-018-1453-y
Diaporthe novem isolated from sunflower (Helianthus annuus) and other crop and weed hosts in Australia
Thompson, S. M., Tan, Y. P., Neate, S. M., Grams, R. M., Shivas, R. G., Lindbeck, K. and Aitken, E. A. B.. 2018. "Diaporthe novem isolated from sunflower (Helianthus annuus) and other crop and weed hosts in Australia." European Journal of Plant Pathology. 152 (3), pp. 823-831. https://doi.org/10.1007/s10658-018-1515-7
Green fluorescent protein transformation sheds more light on a widespread mycoparasitic interaction
Nemeth, Mark Z., Pintye, Alexandra, Horvath, Aron N., Vagi, Pal, Kovacs, Gabor M., Gorfer, Markus and Kiss, Levente. 2019. "Green fluorescent protein transformation sheds more light on a widespread mycoparasitic interaction." Phytopathology: International Journal of the American Phytopathological Society. 109 (8), pp. 1404-1416. https://doi.org/10.1094/PHYTO-01-19-0013-R
Genome resource for Neocamarosporium betae (syn. Pleospora betae), the cause of Phoma Leaf Spot and Root Rot on Beta vulgaris
Vaghefi, Niloofar, Silva, Alex, Koenick, Lori B. and Pethybridge, Sarah J.. 2019. "Genome resource for Neocamarosporium betae (syn. Pleospora betae), the cause of Phoma Leaf Spot and Root Rot on Beta vulgaris." Molecular Plant-Microbe Interactions. 32 (7), pp. 787-789. https://doi.org/10.1094/MPMI-12-18-0334-A
Genomic sequence analysis reveals diversity of Australian Xanthomonas species associated with bacterial leaf spot of tomato, capsicum and chilli
Roach, R., Mann, R., Gambley, C. G., Chapman, T., Shivas, R. G. and Rodoni, B.. 2019. "Genomic sequence analysis reveals diversity of Australian Xanthomonas species associated with bacterial leaf spot of tomato, capsicum and chilli." BMC Genomics. 20 (1 - 310), pp. 1-22. https://doi.org/10.1186/s12864-019-5600-x
Re-evaluation of Mycoleptodiscus species and morphologically similar fungi
Hernandez-Restrepo, M., Bezerra, J. D. P., Tan, Y. P., Wiederhold, N., Crous, P. W., Guarro, J. and Gené, J.. 2019. "Re-evaluation of Mycoleptodiscus species and morphologically similar fungi." Persoonia. 42, pp. 205-227. https://doi.org/10.3767/persoonia.2019.42.08
Ray blight of pyrethrum in Australia: a review of the current status and future opportunities
Bhuiyan, M. A. H. B., Vaghefi, N. and Taylor, P. W. J.. 2019. "Ray blight of pyrethrum in Australia: a review of the current status and future opportunities." Plant Pathology. 68 (4), pp. 620-627. https://doi.org/10.1111/ppa.13000
An international perspective on genetic structure and gene flow in Cercospora beticola populations
Knight, N. L., Vaghefi, N., Kikkert, J., Bolton, M. D., Secor, G. A., Hanson, L., Nelson, S. C. and Pethybridge, S. J.. 2018. "An international perspective on genetic structure and gene flow in Cercospora beticola populations." 11th International Congress of Plant Pathology (ICPP 2018): Plant Health in a Global Economy. Boston, United States 29 Jul - 03 Aug 2018 St Paul, United States. American Phytopathological Society.
Genetic structure of Phoma betae populations on Beta vulgaris in New York and Washington States, USA
Koenick, L., Knight, N. L., Vaghefi, N., du Toit, L. and Pethybridge, S. J.. 2018. "Genetic structure of Phoma betae populations on Beta vulgaris in New York and Washington States, USA." 11th International Congress of Plant Pathology (ICPP 2018): Plant Health in a Global Economy. Boston, United States 29 Jul - 03 Aug 2018 St Paul, United States.
A broad look at charcoal rot in the Northern Region broadacre crops through soil sampling and in-crop surveys
Adorada, D. L., Gonzales, P., McKay, A., Vaghefi, N. and Sparks, A. H.. 2018. "A broad look at charcoal rot in the Northern Region broadacre crops through soil sampling and in-crop surveys." 10th Australasian Soilborne Diseases Symposium. Adelaide, Australia 04 - 08 Sep 2018 Australia.
Temporal shifts in genetic structure and differentiation of Cercospora beticola populations in table beet fields of New York
Knight, Noel L., Vaghefi, Niloofar, Hansen, Zachariah R., Kikkert, Julie R. and Pethybridge, Sarah J.. 2017. "Temporal shifts in genetic structure and differentiation of Cercospora beticola populations in table beet fields of New York." 2017 Annual Meeting of the Northeastern Division of the American Phytopathological Society. Quebec City, Canada 01 - 03 Nov 2017 St Paul, United States. American Phytopathological Society.
Development of microsatellite markers for quantifying genetic diversity of Pleospora betae
Koenick, Lori, Vaghefi, Niloofar, Knight, Noel L., du Toit, Lindsey and Pethybridge, Sarah J.. 2017. "Development of microsatellite markers for quantifying genetic diversity of Pleospora betae." 2017 Annual Meeting of the Northeastern Division of the American Phytopathological Society. Quebec City, Canada 01 - 03 Nov 2017 St Paul, United States. American Phytopathological Society.
Temporal genetic differentiation of Cercospora beticola populations in New York Table beet fields
Knight, Noel L., Vaghefi, Niloofar, Hansen, Zachariah R., Kikkert, Julie R. and Pethybridge, Sarah J.. 2018. "Temporal genetic differentiation of Cercospora beticola populations in New York Table beet fields." Plant Disease: an international journal of applied plant pathology. 102 (11), pp. 2074-2082. https://doi.org/10.1094/PDIS-01-18-0175-RE
The origin and diversification of the Entorrhizales: deep evolutionary roots but recent speciation with a phylogenetic and phenotypic split between associates of the Cyperaceae and Juncaceae
Riess, Kai, Schon, Max E., Ziegler, Rebekka, Lutz, Matthias, Shivas, Roger G., Piatek, Marcin and Garnica, Sigisfredo. 2019. "The origin and diversification of the Entorrhizales: deep evolutionary roots but recent speciation with a phylogenetic and phenotypic split between associates of the Cyperaceae and Juncaceae." Organisms Diversity and Evolution. 19 (1), pp. 13-30. https://doi.org/10.1007/s13127-018-0384-4
The first smut fungus, Thecaphora anthemidis sp. nov. (Glomosporiaceae), described from Anthemis (Asteraceae)
Kruse, Julia, Kummer, Volker, Shivas, Roger G. and Thines, Marco. 2018. "The first smut fungus, Thecaphora anthemidis sp. nov. (Glomosporiaceae), described from Anthemis (Asteraceae)." MycoKeys. 41, pp. 39-50. https://doi.org/10.3897/mycokeys.41.28454
First report of powdery mildew on goji berry (Lycium barbarum) caused by arthrocladiella mougeotii in Queensland, Australia
Kiss, L., Stuart, K., Grigg, J., Calvert, J. and Dearnaley, J. D. W.. 2018. "First report of powdery mildew on goji berry (Lycium barbarum) caused by arthrocladiella mougeotii in Queensland, Australia." Plant Disease: an international journal of applied plant pathology. 102 (2), p. 446. https://doi.org/10.1094/PDIS-07-17-1055-PDN
Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata
Wingfield, Brenda D., Bills, Gerald F., Dong, Yang, Huang, Wenli, Nel, Wilma J., Swalarsk-Parry, Benedicta S., Vaghefi, Niloofar, Wilken, Markus P., An, Zhiqiang, de Beer, Z. Wilhelm, De Vos, Lieschen, Chen, Li, Duong, Tuan A., Gao, Yun, Hammerbacher, Almuth, Kikkert, Julie R., Li, Yan, Li, Huiying, Li, Kuan, ..., Zhang, Xiaoling. 2018. "Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata." IMA Fungus: the global mycological journal. 9 (1), pp. 199-223. https://doi.org/10.5598/imafungus.2018.09.01.13
Summer paddock survey finds fungal and bacterial diseases decreased but not eliminated [GRDC Field Crop Diseases Community of Practice, 1 October 2018 - Online community]
Adorada, Dante, Kelly, Lisa, Vaghefi, Niloofar and Sparks, Adam H,. 2018. "Summer paddock survey finds fungal and bacterial diseases decreased but not eliminated [GRDC Field Crop Diseases Community of Practice, 1 October 2018 - Online community]." GRDC Field Crop Diseases Community of Practice. 1 October 2018, pp. 1-8.
Current status of the Botryosphaeriaceae in Australia
Burgess, Treena I., Tan, Yu Pei, Garnas, Jeff, Edwards, Jacqueline, Scarlett, Kelly A., Shuttleworth, Lucas A., Daniel, Rosalie, Dann, Elizabeth K., Parkinson, Louisamarie E., Dinh, Quang, Shivas, Roger G. and Jami, Fahimeh. 2019. "Current status of the Botryosphaeriaceae in Australia." Australasian Plant Pathology. 48 (1), pp. 35-44. https://doi.org/10.1007/s13313-018-0577-5
Multi-locus phylogeny and taxonomy of Exserohilum
Hernandez-Restrepo, M., Madrid, H., Tan, Y. P., da Cunha, K. C., Gené, J., Guarro, J. and Crous, P. W.. 2018. "Multi-locus phylogeny and taxonomy of Exserohilum." Persoonia. 41, pp. 71-108. https://doi.org/10.3767/persoonia.2018.41.05
From leaf to continent: the multi-scale distribution of an invasive cryptic pathogen complex on oak
Desprez-Loustau, Marie-Laure, Massot, Marie, Toigo, Maude, Fort, Tania, Aday Kaya, Ayse Gulden, Boberg, Johanna, Braun, Uwe, Capdevielle, Xavier, Cech, Thomas, Chandelier, Anne, Christova, Petya, Corcobado, Tamara, Dogmus, Tugba, Dutech, Cyril, Fabreguettes, Olivier, Faivre d'Arcier, Julie, Gross, Andrin, Horta Jung, Marilia, Iturritxa, Eugenia, ..., Tack, Ayco J.M.. 2018. "From leaf to continent: the multi-scale distribution of an invasive cryptic pathogen complex on oak." Fungal Ecology. 36, pp. 39-50. https://doi.org/10.1016/j.funeco.2018.08.001
Fungal planet description sheets: 716-784
Crous, P. W., Wingfield, M. J., Burgess, T. I., Hardy, G. E. St. J., Gene, J., Guarro, J., Baseia, I. G., Garcia, D., Gusmao, L. F. P., Souza-Motta, C. M., Thangavel, R., Adamcik, S., Barili, A., Barnes, C. W., Bezerra, J. D. P., Bordallo, J. J., Cano-Lira, J. F., de Oliveira, R. J. V., Ercole, E., ..., Groenewald, J. Z.. 2018. "Fungal planet description sheets: 716-784." Persoonia. 40, pp. 240-393. https://doi.org/10.3767/persoonia.2018.40.10
Deciphering the biology of Cryptophyllachora eurasiatica gen. et sp. nov., an often cryptic pathogen of an allergenic weed, Ambrosia artemisiifolia
Kiss, Levente, Kovacs, Gabor M., Boka, Karoly, Bohar, Gyula, Boharne, Krisztina Varga, Nemeth, Mark Z., Takamatsu, Susumu, Shin, Hyeon-Dong, Hayova, Vera, Nischwitz, Claudia, Seier, Marion K., Evans, Harry C., Cannon, Paul F., Ash, Gavin James, Shivas, Roger G. and Muller-Scharer, Heinz. 2018. "Deciphering the biology of Cryptophyllachora eurasiatica gen. et sp. nov., an often cryptic pathogen of an allergenic weed, Ambrosia artemisiifolia." Scientific Reports. 8, pp. 1-14. https://doi.org/10.1038/s41598-018-29102-5
First report of Colletotrichum fioriniae causing anthracnose of elephant garlic (Allium ampeloprasum var. ampeloprasum) in New York, USA
Hay, F., Vaghefi, N., Strickland, D., Hadad, R. and Pethybridge, S.. 2018. "First report of Colletotrichum fioriniae causing anthracnose of elephant garlic (Allium ampeloprasum var. ampeloprasum) in New York, USA." New Disease Reports. 38 (1), pp. 1-1. https://doi.org/10.5197/j.2044-0588.2018.038.001
First Reports of Diaporthe kongii, D. masirevicii, and D. ueckerae Associated with Stem and Peg Dieback on Peanut in Australia
Thompson, S. M., Grams, R. A., Neate, S. M., Shivas, R.G., Ryley, M. J, Tan, Y. P., Aitken, E. A. B., Wright, G. C and O’Connor, D. J.. 2018. "First Reports of Diaporthe kongii, D. masirevicii, and D. ueckerae Associated with Stem and Peg Dieback on Peanut in Australia." Plant Disease: an international journal of applied plant pathology. 102 (7), p. 1459. https://doi.org/10.1094/PDIS-12-17-1930-PDN
Cryptic species of Curvularia in the culture collection of the Queensland Plant Pathology Herbarium
Tan, Yu Pei, Crous, Pedro W. and Shivas, Roger G.. 2018. "Cryptic species of Curvularia in the culture collection of the Queensland Plant Pathology Herbarium." MycoKeys. 35, pp. 1-25. https://doi.org/10.3897/mycokeys.35.25665
Diversity of gall-forming rusts (Uromycladium, Pucciniales) on Acacia in Australia
Doungsa-ard, C., McTaggart, A. R., Geering, A. D. W. and Shivas, R. G.. 2018. "Diversity of gall-forming rusts (Uromycladium, Pucciniales) on Acacia in Australia." Persoonia. 40, pp. 221-238. https://doi.org/10.3767/persoonia.2018.40.09
Re-visiting management options for charcoal rot in sorghum [eXtension AUS Field Crop Diseases, 19 March 2018 - Online community]
Adorada, Dante, Vaghefi, Niloofar and Sparks, Adam. 2018. "Re-visiting management options for charcoal rot in sorghum [eXtension AUS Field Crop Diseases, 19 March 2018 - Online community]." eXtension AUS Field Crop Diseases. 19 March 2018, pp. 1-8.
Cryptic diversity, pathogenicity, and evolutionary species boundaries in Cercospora populations associated with Cercospora leaf spot of Beta vulgaris
Vaghefi, Niloofar, Kikkert, Julie R., Hay, Frank S., Carver, Gavriela D., Koenick, Lori B., Bolton, Melvin D., Hanson, Linda E., Secor, Gary A. and Pethybridge, Sarah J.. 2018. "Cryptic diversity, pathogenicity, and evolutionary species boundaries in Cercospora populations associated with Cercospora leaf spot of Beta vulgaris." Fungal Biology. 122 (4), pp. 264-282. https://doi.org/10.1016/j.funbio.2018.01.008
Diaporthe diversity and pathogenicity revealed from a broad survey of grapevine diseases in Europe
Guarnaccia, V., Groenewald, J. Z., Woodhall, J., Armengol, J., Cinelli, T., Eichmeier, A., Ezra, D., Fontaine, F., Gramaje, D., Gutierrez-Aguirregabiria, A., Kaliterna, J., Kiss, L., Larignon, P., Luque, J., Mugnai, L., Naor, V., Raposo, R., Sandor, E., Vaczy, K. Z. and Crous, P. W.. 2018. "Diaporthe diversity and pathogenicity revealed from a broad survey of grapevine diseases in Europe." Persoonia. 40, pp. 135-153. https://doi.org/10.3767/persoonia.2018.40.06
First report of carrot root rot caused by Rhexocercosporidium carotae in the United States - a disease note
Hay, F. S., Vaghefi, N., Ivy, A. and Pethybridge, S. J.. 2017. "First report of carrot root rot caused by Rhexocercosporidium carotae in the United States - a disease note." Plant Disease: an international journal of applied plant pathology. 101 (1), pp. 248-248. https://doi.org/10.1094/PDIS-05-16-0656-PDN
A dynamic, web-based resource to identify rust fungi (Pucciniales) in southern Africa
McTaggart, Alistair R., Beasley, Dean R., Wingfield, Michael J., Wood, Alan R., Pretorius, Zakkie K., Drenth, Andre, Shivas, Roger G. and Roux, Jolanda. 2017. "A dynamic, web-based resource to identify rust fungi (Pucciniales) in southern Africa." MycoKeys. 26, pp. 77-83. https://doi.org/10.3897/mycokeys.26.14602
Pathogenicity of nectriaceous fungi on avocado in Australia
Parkinson, Louisamarie E., Shivas, Roger G. and Dann, Elizabeth K.. 2017. "Pathogenicity of nectriaceous fungi on avocado in Australia." Phytopathology: International Journal of the American Phytopathological Society. 107 (12), pp. 1479-1485. https://doi.org/10.1094/PHYTO-03-17-0084-R
Dothiorella omnivora isolated from grapevine with trunk disease symptoms in Hungary
Vaczy, Kalman Zoltan, Nemeth, Mark Z., Csikos, Anett, Kovacs, Gabor M. and Kiss, Levente. 2018. "Dothiorella omnivora isolated from grapevine with trunk disease symptoms in Hungary." European Journal of Plant Pathology. 150 (3), pp. 817-824. https://doi.org/10.1007/s10658-017-1323-5
First report of cercospora blight of asparagus officinalis caused by cercospora asparagi in New York
Hay, F. S., Maloney, E., Vaghefi, N., Shivas, R. G and Pethybridge, S. J. 2017. "First report of cercospora blight of asparagus officinalis caused by cercospora asparagi in New York." Plant Disease: an international journal of applied plant pathology. 101 (11), pp. 1953-1953. https://doi.org/10.1094/PDIS-05-17-0648-PDN
Colletotrichum species associated with pre-and post-harvest diseases of avocado and mango in eastern Australia
Giblin, F. R., Tan, Y. P., Mitchell, R., Coates, L. M., Irwin, J. A. G. and Shivas, R.G.. 2018. "Colletotrichum species associated with pre-and post-harvest diseases of avocado and mango in eastern Australia." Australasian Plant Pathology. 47 (3), pp. 269-276. https://doi.org/10.1007/s13313-018-0553-0
Identification of Xanthomonas species associated with bacterial leaf spot of tomato, capsicum and chilli crops in eastern Australia
Roach, R., Mann, R., Gambley, C. G., Shivas, R. G. and Rodoni, B.. 2018. "Identification of Xanthomonas species associated with bacterial leaf spot of tomato, capsicum and chilli crops in eastern Australia." European Journal of Plant Pathology. 150 (3), pp. 595-608. https://doi.org/10.1007/s10658-017-1303-9
Notes for genera: Ascomycota
Wijayawardene, Nalin N., Hyde, Kevin D., Rajeshkumar, Kunhiraman C., Hawksworth, David L., Madrid, Hugo, Kirk, Paul M., Braun, Uwe, Singh, Rajshree V., Crous, Pedro W., Kukwa, Martin, Lucking, Robert, Kurtzman, Cletus P., Yurkov, Andrey, Haelewaters, Danny, Aptroot, Andre, Lumbsch, H. Thorsten, Timdal, Einar, Ertz, Damien, Etayo, Javier, ..., Karunarathna, Samantha C.. 2017. "Notes for genera: Ascomycota." Fungal Diversity. 86 (1), pp. 1-594. https://doi.org/10.1007/s13225-017-0386-0
Efficacy of fungicides for the control of Cercospora leaf spot in processing table beet, 2015
Pethybridge, S. J., Vaghefi, N. and Kikkert, J.. 2016. "Efficacy of fungicides for the control of Cercospora leaf spot in processing table beet, 2015." Plant Disease Management Reports. 3 (Report No. 10), pp. 1-1.
Ten new species of Macalpinomyces on Eriachne in northern Australia
Li, Ying-Ming, Shivas, Roger G., McTaggart, Alistair R., Zhao, Peng and Cai, Lei. 2017. "Ten new species of Macalpinomyces on Eriachne in northern Australia." Mycologia. 109 (3), pp. 408-421. https://doi.org/10.1080/00275514.2017.1330026
Genera of phytopathogenic fungi: GOPHY 1
Marin-Felix, Y., Groenewald, J. Z., Cai, L., Chen, Q., Marincowitz, S., Barnes, I., Bensch, K., Braun, U., Camporesi, E., Damm, U., de Beer, Z. W., Dissanayake, A., Edwards, J., Giraldo, A., Hernandez-Restrepo, M., Hyde, K. D., Jayawardena, R. S., Lombard, L., Luangsa-ard, J., ..., Crous, P. W.. 2017. "Genera of phytopathogenic fungi: GOPHY 1." Studies in Mycology. 86 (86), pp. 99-216. https://doi.org/10.1016/j.simyco.2017.04.002
Horticultural characteristics and susceptibility of table beet cultivars to Cercospora Leaf Spot in New York
Pethybridge, Sarah J., Vaghefi, Niloofar and Kikkert, Julie R.. 2017. "Horticultural characteristics and susceptibility of table beet cultivars to Cercospora Leaf Spot in New York." Horttechnology. 27 (4), pp. 530-538.
Draft genome sequences of Chrysoporthe austroafricana, Diplodia scrobiculata, Fusarium nygamai, Leptographium lundbergii, Limonomyces culmigenus, Stagonosporopsis tanaceti, and Thielaviopsis punctulata
Wingfield, Brenda D., Ades, Peter K., Al-Naemi, Fatima A., Beirn, Lisa A., Bihon, Wubetu, Crouch, Jo Anne, de Beer, Z. Wilhelm, De Vos, Lieschen, Duong, Tuan A., Fields, Christopher J., Fourie, Gerda, Kanzi, Aquillah M., Malapi-Wight, Martha, Pethybridge, Sarah J., Radwan, Osman, Rendon, Gloria, Slippers, Bernard, Santana, Quentin C., Steenkamp, Emma T., ..., Wingfield, Michael J.. 2015. "Draft genome sequences of Chrysoporthe austroafricana, Diplodia scrobiculata, Fusarium nygamai, Leptographium lundbergii, Limonomyces culmigenus, Stagonosporopsis tanaceti, and Thielaviopsis punctulata." IMA Fungus: the global mycological journal. 6 (1), pp. 233-248. https://doi.org/10.5598/imafungus.2015.06.01.15
Rapid changes in the genetic composition of Stagonosporopsis tanaceti population in Australian pyrethrum fields
Vaghefi, Niloofar, Hay, Frank S., Ades, Peter K., Pethybridge, Sarah Jane, Ford, Rebecca and Taylor, Paul W. J.. 2015. "Rapid changes in the genetic composition of Stagonosporopsis tanaceti population in Australian pyrethrum fields." Phytopathology: International Journal of the American Phytopathological Society. 105 (3), pp. 358-369. https://doi.org/10.1094/PHYTO-08-14-0212-R
Curvularia tsudae comb. nov. et nom. nov., formerly Pseudocochliobolus australiensis, and a revised synonymy for Curvularia australiensis
Deng, Hui, Tan, Yu Pei, Shivas, Roger G. and Niu, Yong Chun. 2015. "Curvularia tsudae comb. nov. et nom. nov., formerly Pseudocochliobolus australiensis, and a revised synonymy for Curvularia australiensis." Mycoscience. 56 (1), pp. 24-28. https://doi.org/10.1016/j.myc.2014.02.002
Johnalcornia gen. et. comb. nov., and nine new combinations in Curvularia based on molecular phylogenetic analysis
Tan, Yu Pei, Madrid, Hugo, Crous, Pedro W. and Shivas, Roger G.. 2014. "Johnalcornia gen. et. comb. nov., and nine new combinations in Curvularia based on molecular phylogenetic analysis." Australasian Plant Pathology. 43 (6), pp. 589-603. https://doi.org/10.1007/s13313-014-0315-6
Ravenelia acaciae-arabicae and Ravenelia evansii are distinct species on Acacia nilotica subsp. indica in India
Shivas, R. G., Balu, A., Singh, S., Ahmed, S. I. and Dhileepan, K.. 2013. "Ravenelia acaciae-arabicae and Ravenelia evansii are distinct species on Acacia nilotica subsp. indica in India." Australasian Mycologist. 31, pp. 31-37.
The Amsterdam Declaration on Fungal Nomenclature
Hawksworth, David L., Crous, Pedro W., Redhead, Scott A., Reynolds, Don R., Samson, Robert A., Seifert, Keith A., Taylor, John W., Wingfield, Michael J., Abaci, Ozlem, Aime, Catherine, Asan, Ahmet, Bai, Feng-Yan, de Beer, Z. Wilhelm, Begerow, Dominik, Berikten, Derya, Boekhout, Teun, Buchanan, Peter K., Burgess, Treena, Buzina, Walter, ..., Zhang, Ning. 2011. "The Amsterdam Declaration on Fungal Nomenclature." IMA Fungus: the global mycological journal. 2 (1), pp. 105-112. https://doi.org/10.5598/imafungus.2011.02.01.14
No indication of strict host associations in a widespread mycoparasite: Grapevine Powdery Mildew (Erysiphe necator) is attacked by phylogenetically distant Ampelomyces strains in the field
Pintye, Alexandra, Bereczky, Zsolt, Kovacs, Gabor M., Nagy, Laszlo G., Xu, Xiangming, Legler, Sara Elisabetta, Vaczy, Zsuzsanna, Vaczy, Kalman Zoltan, Caffi, Tito, Rossi, Vittorio and Kiss, Levente. 2012. "No indication of strict host associations in a widespread mycoparasite: Grapevine Powdery Mildew (Erysiphe necator) is attacked by phylogenetically distant Ampelomyces strains in the field." Phytopathology: International Journal of the American Phytopathological Society. 102 (7), pp. 707-716. https://doi.org/10.1094/PHYTO-10-11-0270
Detection and quantification of Leveillula taurica growth in pepper leaves
Zheng, Zheng, Nonomura, Teruo, Boka, Karoly, Matsuda, Yoshinori, Visser, Richard G. F., Toyoda, Hideyoshi, Kiss, Levente and Bai, Yuling. 2013. "Detection and quantification of Leveillula taurica growth in pepper leaves." Phytopathology: International Journal of the American Phytopathological Society. 103 (6), pp. 623-632. https://doi.org/10.1094/PHYTO-08-12-0198-R
New insights into the life cycle of the wheat powdery mildew: direct observation of ascosporic infection in Blumeria graminis f. sp. tritici
Jankovics, Tünde, Komaromi, Judit, Fabian, Attila, Jager, Katalin, Vida, Gyula and Kiss, Levente. 2015. "New insights into the life cycle of the wheat powdery mildew: direct observation of ascosporic infection in Blumeria graminis f. sp. tritici." Phytopathology: International Journal of the American Phytopathological Society. 105 (6), pp. 797-804. https://doi.org/10.1094/PHYTO-10-14-0268-R
Fungal planet description sheets: 69-91
Crous, P. W., Groenewald, J. Z., Shivas, R. G., Edwards, J., Seifert, K. A., Alfenas, A. C., Alfenas, R. F., Burgess, T. I., Carnegie, A. J., Hardy, G. E. St J., Quaedvlieg, W., Young, A. J., McTaggart, A. R., Pascoe, I. G., Porter, I. J., Louis-Seize, G., Pereira, O. L., Hüberli, D., Jung, T., ..., White, G. P.. 2011. "Fungal planet description sheets: 69-91." Persoonia. 26, pp. 108-156. https://doi.org/10.3767/003158511X581723
Endophytic and pathogenic Phyllosticta species, with reference to those associated with Citrus Black spot
Glienke, C., Pereira, O. L., Stringari, D., Fabris, J., Kava-Cordeiro, V., Galli-Terasawa, L., Cunnington, J., Shivas, R. G., Groenewald, J. Z. and Crous, P. W.. 2011. "Endophytic and pathogenic Phyllosticta species, with reference to those associated with Citrus Black spot." Persoonia. 26, pp. 47-56. https://doi.org/10.3767/003158511X569169
Fungal planet description sheets: 107-127
Crous, P. W., Summerell, B. A., Shivas, R. G., Burgess, T. I., Lombard, L., Groenewald, J. Z., Liew, E. C Y, McTaggart, A. R., Hardy, G. E S J, Huberli, D., De cock, C. A., Dreyer, L. L., Granke, L. L., Hausbeck, M. K., Guest, D. I., Shuttleworth, L. A., Jung, T., Koukol, O., Lennox, C. L., ..., Windstam, S. T.. 2012. "Fungal planet description sheets: 107-127." Persoonia. 28, pp. 138-182. https://doi.org/10.3767/003158512X652633
Fungal planet description sheets: 320–370
Crous, P. W., Wingfield, M. J., Guarro, J., Hernandez-Restrep, M., Sutton, D. A., Acharya, K., Barber, P. A., Boekhout, T., Dimitrov, R. A., Duenas, M., Dutta, A. K., Gene, J., Gouliamova, D. E., Groenewald, M., Lombard, L., Morozova, O. V., Sarkar, J., Smith, M. Th., Stchigel, A. M., ..., Groenewald, J. Z.. 2015. "Fungal planet description sheets: 320–370." Persoonia. 34, pp. 167-266. https://doi.org/10.3767/003158515X688433
Novel species of Cercospora and Pseudocercospora (Capnodiales, Mycosphaerellaceae) from Australia
Shivas, Roger Graham, Marney, Thomas Stephen, Tan, Yu Pei and McTaggart, Alistair Ross. 2015. "Novel species of Cercospora and Pseudocercospora (Capnodiales, Mycosphaerellaceae) from Australia." Fungal Biology. 119 (5), pp. 362-369. https://doi.org/10.1016/j.funbio.2014.09.004
Wongia gen. nov. (Papulosaceae, Sordariomycetes), a new generic name for two root-infecting fungi from Australia
Khemmuk, Wanporn, Geering, Andrew D. W. and Shivas, Roger G.. 2016. "Wongia gen. nov. (Papulosaceae, Sordariomycetes), a new generic name for two root-infecting fungi from Australia." IMA Fungus: the global mycological journal. 7 (2), pp. 247-252. https://doi.org/10.5598/imafungus.2016.07.02.04
A phylogenetic and taxonomic re-evaluation of the Bipolaris - Cochliobolus - Curvularia Complex
Manamgoda, Dimuthu S., Cai, Lei, McKenzie, Eric H. C., Crous, Pedro W., Madrid, Hugo, Chukeatirote, Ekachai, Shivas, Roger G., Tan, Yu Pei and Hyde, Kevin D.. 2012. "A phylogenetic and taxonomic re-evaluation of the Bipolaris - Cochliobolus - Curvularia Complex." Fungal Diversity. 56 (1), pp. 131-144. https://doi.org/10.1007/s13225-012-0189-2
Molecular phylogenetic analysis reveals six new species of Diaporthe from Australia
Tan, Y. P., Edwards, J., Grice, K. R E and Shivas, R. G.. 2013. "Molecular phylogenetic analysis reveals six new species of Diaporthe from Australia." Fungal Diversity. 61 (1), pp. 251-260. https://doi.org/10.1007/s13225-013-0242-9
Online identification guides for Australian smut fungi (Ustilaginomycotina) and rust fungi (Pucciniales)
Shivas, Roger G., Beasley, Dean R. and McTaggart, Alistair R.. 2014. "Online identification guides for Australian smut fungi (Ustilaginomycotina) and rust fungi (Pucciniales)." IMA Fungus: the global mycological journal. 5 (2), pp. 195-202. https://doi.org/10.5598/imafungus.2014.05.02.03
Baobabopsis, a new genus of graminicolous downy mildews from tropical Australia, with an updated key to the genera of downy mildews
Thines, Marco, Telle, Sabine, Choi, Young Joon, Tan, Yu Pei and Shivas, Roger G.. 2015. "Baobabopsis, a new genus of graminicolous downy mildews from tropical Australia, with an updated key to the genera of downy mildews." IMA Fungus: the global mycological journal. 6 (2), pp. 483-491. https://doi.org/10.5598/imafungus.2015.06.02.12
Novel Pathotypes of Elsinoë australis Associated with Citrus australasica and Simmondsia chinensis in Australia
Miles, Andrew K., Tan, Yu Pei, Shivas, Roger G. and Drenth, André. 2015. "Novel Pathotypes of Elsinoë australis Associated with Citrus australasica and Simmondsia chinensis in Australia." Tropical Plant Pathology. 40 (1), pp. 26-34. https://doi.org/10.1007/s40858-015-0005-0
Mycosarcoma (Ustilaginaceae), a resurrected generic name for corn smut (Ustilago maydis) and its close relatives with hypertrophied, tubular sori
McTaggart, Alistair R., Shivas, Roger G., Boekhout, Teun, Oberwinkler, Franz, Vanky, Kalman, Pennycook, Shaun R. and Begerow, Dominik. 2016. "Mycosarcoma (Ustilaginaceae), a resurrected generic name for corn smut (Ustilago maydis) and its close relatives with hypertrophied, tubular sori." IMA Fungus: the global mycological journal. 7 (2), pp. 309-315. https://doi.org/10.5598/imafungus.2016.07.02.10
Colletotrichum species in Australia
Shivas, Roger G., Tan, Yu Pei, Edwards, Jacqueline, Dinh, Quang, Maxwell, Aaron, Andjic, Vera, Liberato, José R., Anderson, Chris, Beasley, Dean R., Bransgrove, Kaylene, Coates, Lindy M., Cowan, Karren, Daniel, Rosalie, Dean, Jan R., Lomavatu, Mereia Fong, Mercado-Escueta, Doris, Mitchell, Roger W., Thangavel, Raja, Tran-Nguyen, Lucy T T and Weir, Bevan S.. 2016. "Colletotrichum species in Australia." Australasian Plant Pathology. 45 (5), pp. 447-464. https://doi.org/10.1007/s13313-016-0443-2
Eight novel Bipolaris species identified from John L. Alcorn’s collections at the Queensland Plant Pathology Herbarium (BRIP)
Tan, Yu Pei, Shivas, Roger G. and Crous, Pedro W.. 2016. "Eight novel Bipolaris species identified from John L. Alcorn’s collections at the Queensland Plant Pathology Herbarium (BRIP)." Mycological Progress: international journal of fungal sciences. 15 (10-11), pp. 1203-1214. https://doi.org/10.1007/s11557-016-1240-6
Phyllosticta species on orchids (Orchidaceae), introducing Phyllosticta speewahensis sp. nov. (Phyllostictaceae, Ascomycota) from northern Australia
Shivas, Roger Graham, Tan, Yu Pei and Grice, Kathy R. E.. 2013. "Phyllosticta species on orchids (Orchidaceae), introducing Phyllosticta speewahensis sp. nov. (Phyllostictaceae, Ascomycota) from northern Australia." Sydowia: an international journal of mycology. 65 (1), pp. 139-146.
Dry flower disease of Macadamia in Australia caused by Neopestalotiopsis macadamiae sp. nov. and Pestalotiopsis macadamiae sp. nov
Akinsanmi, Olufemi A., Nisa, Shaheen, Jeff-Ego, Olumdie S., Shivas, Roger G. and Drenth, Andre. 2017. "Dry flower disease of Macadamia in Australia caused by Neopestalotiopsis macadamiae sp. nov. and Pestalotiopsis macadamiae sp. nov." Plant Disease: an international journal of applied plant pathology. 101 (1), pp. 45-53. https://doi.org/10.1094/PDIS-05-16-0630-RE
Genome sequences of Pseudomonas spp. isolated from cereal crops
Gardiner, Donald M., Stiller, Jiri, Covarelli, Lorenzo, Lindeberg, Magdalen, Shivas, Roger G. and Manners, John M.. 2013. "Genome sequences of Pseudomonas spp. isolated from cereal crops." Genome Announcements. 1 (3), pp. 1-2. https://doi.org/10.1128/genomeA.00209-13
Global genotype flow in Cercospora beticola populations confirmed through genotyping-by-sequencing
Vaghefi, Niloofar, Kikkert, Julie R., Bolton, Melvin D., Hanson, Linda E., Secor, Gary A., Nelson, Scot C. and Pethybridge, Sarah J.. 2017. "Global genotype flow in Cercospora beticola populations confirmed through genotyping-by-sequencing." PLoS One. 12 (10). https://doi.org/10.1371/journal.pone.0186488
Abscisic acid activates pathogenesis-related defense gene signaling in lentils
Ford, Rebecca, Tan, David, Vaghefi, Niloofar and Mustafa, Barkat. 2017. "Abscisic acid activates pathogenesis-related defense gene signaling in lentils." Pandey, Girdhar K. (ed.) Mechanism of plant hormone signaling under stress. United States. John Wiley & Sons. pp. 243-270
Genetic structure of Cercospora beticola populations on Beta vulgaris in New York and Hawaii
Vaghefi, Niloofar, Nelson, Scot C., Kikkert, Julie R. and Pethybridge, Sarah J.. 2017. "Genetic structure of Cercospora beticola populations on Beta vulgaris in New York and Hawaii." Scientific Reports. 7. https://doi.org/10.1038/s41598-017-01929-4
De novo genome assembly of Cercospora beticola for microsatellite marker development and validation
Vaghefi, Niloofar, Kikkert, Julie R., Bolton, Melvin D., Hanson, Linda E., Secor, Gary A. and Pethybridge, Sarah J.. 2017. "De novo genome assembly of Cercospora beticola for microsatellite marker development and validation." Fungal Ecology. 26, pp. 125-134. https://doi.org/10.1016/j.funeco.2017.01.006
Management of cercospora leaf spot in conventional and organic table beet production
Pethybridge, Sarah J., Vaghefi, Niloofar and Kikkert, Julie R.. 2017. "Management of cercospora leaf spot in conventional and organic table beet production." Plant Disease: an international journal of applied plant pathology. 101 (9), pp. 1642-1651. https://doi.org/10.1094/PDIS-04-17-0528-RE
Two new species of Moreaua (Ustilaginomycetes), on Actinoschoenus and Chrysitrix, from Western Australia
Shivas, Roger G., Barrett, Matthew D., Barrett, Russell L. and Vanky, Kalman. 2011. "Two new species of Moreaua (Ustilaginomycetes), on Actinoschoenus and Chrysitrix, from Western Australia." Mycologia Balcanica. 8, pp. 137-140.
Structure of Cercospora beticola populations in organic and conventional table beet production in New York and implications for disease management
Vaghefi, N., Kikkert, J. and Pethybridge, S.. 2016. "Structure of Cercospora beticola populations in organic and conventional table beet production in New York and implications for disease management." 76th Annual Meeting of the Northeastern Division: The American Phytopathological Society. Ithaca, United States 19 - 21 Oct 2016 United States. American Phytopathological Society. https://doi.org/10.1094/PHYTO-107-2-S2.5
Occurrence of grey mould on Bucida buceras, a tree of subtropical origin, under indoor conditions - a disease note
Richweisz, A., Nemeth, M. Z., Kiss, L. and Ersek, T.. 2015. "Occurrence of grey mould on Bucida buceras, a tree of subtropical origin, under indoor conditions - a disease note." Acta Phytopathologica et Entomologica Hungarica. 50 (1). https://doi.org/10.1556/038.50.2015.1.1
Phylogenetic and population genetic analyses of Stagonosporopsis tanaceti, the cause of ray blight of pyrethrum in Australia
Vaghefi, N., Hay, F. S., Ades, P. K., Pethybridge, S. J., Ford, R. and Taylor, P. W. J.. 2014. "Phylogenetic and population genetic analyses of Stagonosporopsis tanaceti, the cause of ray blight of pyrethrum in Australia." 10th International Mycological Congress (IMC10 2014). Bangkok, Thailand 03 - 08 Aug 2014
Taxonomic reassessment of the ray blight pathogen of pyrethrum in Australia
Vaghefi, N., Pethybridge, S. J., Ford, R., Nicolas, M. E., Crous, P. W. and Taylor, P. W.. 2012. "Taxonomic reassessment of the ray blight pathogen of pyrethrum in Australia." 2012 American Phytopathological Society Annual Meeting (APS 2012). Rhode Island, United States of America 04 - 08 Aug 2012 United States. American Phytopathological Society.
Foreword: special issue on fungal grapevine diseases
Kiss, Levente, Holb, Imre J., Rossi, Vittorio, Cadle-Davidson, Lance and Jeger, Michael J.. 2016. "Foreword: special issue on fungal grapevine diseases." European Journal of Plant Pathology. 144 (4), pp. 693-694. https://doi.org/10.1007/s10658-015-0844-z
Cryptic diversity in Tranzscheliella spp. (Ustilaginales) is driven by host switches
Li, Ying-Ming, Shivas, Roger G. and Cai, Lei. 2017. "Cryptic diversity in Tranzscheliella spp. (Ustilaginales) is driven by host switches." Scientific Reports. 7. https://doi.org/10.1038/srep43549
Novel species of Gliocladiopsis (Nectriaceae, Hypocreales, Ascomycota) from avocado roots (Persea americana) in Australia
Parkinson, Louisamarie E., Shivas, Roger G. and Dann, Elizabeth K.. 2017. "Novel species of Gliocladiopsis (Nectriaceae, Hypocreales, Ascomycota) from avocado roots (Persea americana) in Australia." Mycoscience. 58 (2), pp. 95-102. https://doi.org/10.1016/j.myc.2016.10.004
Incidence and pathogenicity of Didymella americana on table beet in new york
Vaghefi, Niloofar, Kikkert, Julie R. and Pethybridge, Sarah J.. 2016. "Incidence and pathogenicity of Didymella americana on table beet in new york." Plant Health Progress. 17, pp. 270-272. https://doi.org/10.1094/PHP-BR-16-0064
First record of Ustilago sporoboli-indici in Australia
Vitelli, J. S., Tan, Y. P., Riding, N., Holdom, D. G., Chamberlain, A. and Shivas, R.G.. 2017. "First record of Ustilago sporoboli-indici in Australia." Australasian Plant Disease Notes. 12 (1), pp. 1-3. https://doi.org/10.1007/s13314-017-0277-y
A novel pathogenesis-related protein (LcPR4a) from lentil, and its involvement in defence against Ascochyta lentis
Vaghefi, Niloofar, Mustafa, Barkat M., Dulal, Nabeen, Selby-Pham, Jamie, Taylor, Paul W. J. and Ford, Rebecca. 2013. "A novel pathogenesis-related protein (LcPR4a) from lentil, and its involvement in defence against Ascochyta lentis." Phytopathologia Mediterranea. 52 (1), pp. 192-201.
A new anthracnose disease of pyrethrum caused by Colletotrichum tanaceti sp. nov.
Barimani, M., Pethybridge, S. J., Vaghefi, N., Hay, F. S. and Taylor, P. W. J.. 2013. "A new anthracnose disease of pyrethrum caused by Colletotrichum tanaceti sp. nov." Plant Pathology. 62 (6), pp. 1248-1257. https://doi.org/10.1111/ppa.12054
Stagonosporopsis spp. associated with ray blight disease of Asteraceae
Vaghefi, N., Pethybridge, S. J., Ford, R., Nicolas, M. E., Crous, P. W. and Taylor, P. W. J.. 2012. "Stagonosporopsis spp. associated with ray blight disease of Asteraceae." Australasian Plant Pathology. 41 (6), pp. 675-686. https://doi.org/10.1007/s13313-012-0161-3
Identification of the MAT1 locus in Stagonosporopsis tanaceti, and exploring its potential for sexual reproduction in Australian pyrethrum fields
Vaghefi, Niloofar, Ades, Peter K., Hay, Frank S., Pethybridge, Sarah J., Ford, Rebecca and Taylor, Paul W. J.. 2015. "Identification of the MAT1 locus in Stagonosporopsis tanaceti, and exploring its potential for sexual reproduction in Australian pyrethrum fields." Fungal Biology. 119 (5), pp. 408-419. https://doi.org/10.1016/j.funbio.2014.04.004
Revisiting Stagonosporopsis species associated with chrysanthemum and pyrethrum ray blight
Vaghefi, Niloofar, Pethybridge, Sarah J., Hay, Frank S., Ford, Rebecca, Nicolas, Marc E. and Taylor, Paul W. J.. 2016. "Revisiting Stagonosporopsis species associated with chrysanthemum and pyrethrum ray blight." Australasian Plant Pathology. 45 (6), pp. 561-570. https://doi.org/10.1007/s13313-016-0446-z
Development of a multiplex PCR diagnostic assay for the detection of Stagonosporopsis species associated with ray blight of Asteraceae
Vaghefi, Niloofar, Hay, Frank S., Pethybridge, Sarah J., Ford, Rebecca and Taylor, Paul W. J.. 2016. "Development of a multiplex PCR diagnostic assay for the detection of Stagonosporopsis species associated with ray blight of Asteraceae." European Journal of Plant Pathology. 146 (3), pp. 581-595. https://doi.org/10.1007/s10658-016-0944-4
Genotypic diversity and resistance to azoxystrobin of Cercospora beticola on processing table beet in New York
Vaghefi, Niloofar, Hay, Frank S., Kikkert, Julie and Pethybridge, Sarah J.. 2016. "Genotypic diversity and resistance to azoxystrobin of Cercospora beticola on processing table beet in New York." Plant Disease: an international journal of applied plant pathology. 100 (7), pp. 1466-1473. https://doi.org/10.1094/PDIS-09-15-1014-RE
First report of Oidium longipes as the causal agent of Petunia Powdery Mildew in the United Kingdom
Kiss, L. and Bereczky, Z.. 2011. "First report of Oidium longipes as the causal agent of Petunia Powdery Mildew in the United Kingdom." Plant Disease: an international journal of applied plant pathology. 95 (3), p. 361. https://doi.org/10.1094/PDIS-09-10-0680
Temporal isolation explains host-related genetic differentiation in a group of widespread mycoparasitic fungi
Kiss, Levente, Pintye, Alexandra, Kovacs, Gabor M., Jankovics, Tunde, Fontaine, Michael C., Harvey, Nick, Xu, Xiangming, Nicot, Philippe C., Bardin, Marc, Shykoff, Jacqui A. and Giraud, Tatiana. 2011. "Temporal isolation explains host-related genetic differentiation in a group of widespread mycoparasitic fungi." Molecular Ecology. 20 (7), pp. 1492-1507. https://doi.org/10.1111/j.1365-294X.2011.05007.x
Distinct invasion sources of common ragweed (Ambrosia artemisiifolia) in Eastern and Western Europe
Gladieux, Pierre, Giraud, Tatiana, Kiss, Levente, Genton, Benjamin J., Jonot, Odile and Shykoff, Jacqui A.. 2011. "Distinct invasion sources of common ragweed (Ambrosia artemisiifolia) in Eastern and Western Europe." Biological Invasions. 13 (4), pp. 933-944. https://doi.org/10.1007/s10530-010-9880-y
Characterization of polygenic resistance to powdery mildew in tomato at cytological, biochemical and gene expression level
Li, Chengwei, Faino, Luigi, Dong, Lin, Fan, Junmei, Kiss, Levente, de Giovanni, Claudio, Lebeda, Ales, Scott, John, Matsuda, Yoshinori, Toyoda, Hideyoshi, Lindhout, Pim, Visser, Richard G. F., Bonnema, Guusje and Bai, Yuling. 2012. "Characterization of polygenic resistance to powdery mildew in tomato at cytological, biochemical and gene expression level." Molecular Plant Pathology. 13 (2), pp. 148-159. https://doi.org/10.1111/j.1364-3703.2011.00737.x
First report of rice blast (Magnaporthe Oryzae) on rice (Oryza Sativa) in Western Australia
You, M. P., Lanoiselet, V., Wang, C. P., Shivas, R. G., Li, Y. P. and Barbetti, M. J.. 2012. "First report of rice blast (Magnaporthe Oryzae) on rice (Oryza Sativa) in Western Australia." Plant Disease: an international journal of applied plant pathology. 96 (8), pp. 1228-1229. https://doi.org/10.1094/PDIS-05-12-0420-PDN
First report of Sarocladium Oryzae causing sheath rot on rice (Oryza sativa) in Western Australia
Lanoiselet, V., You, M. P., Li, Y. P., Wang, C. P., Shivas, R. G. and Barbetti, M. J.. 2012. "First report of Sarocladium Oryzae causing sheath rot on rice (Oryza sativa) in Western Australia." Plant Disease: an international journal of applied plant pathology. 96 (9), pp. 1382-1383. https://doi.org/10.1094/PDIS-04-12-0415-PDN
First record of Thyronectria pinicola on Pinus radiata in Australia
Carnegie, A. J., Shuey, L. S., McTaggart, A. R. and Shivas, R. G.. 2015. "First record of Thyronectria pinicola on Pinus radiata in Australia." Plant Disease: an international journal of applied plant pathology. 99 (8), pp. 1182-1183. https://doi.org/10.1094/PDIS-02-15-0187-PDN
Variation in the nrDNA ITS sequences of some powdery mildew species: do routine molecular identification procedures hide valuable information?
Kovacs, Gabor M., Jankovics, Tunde and Kiss, Levente. 2011. "Variation in the nrDNA ITS sequences of some powdery mildew species: do routine molecular identification procedures hide valuable information?" European Journal of Plant Pathology. 131 (1), pp. 135-141. https://doi.org/10.1007/s10658-011-9793-3
A hyperparasite affects the population dynamics of a wild plant pathogen
Tollenaere, C., Pernechele, B., Makinen, H. S., Parratt, S. R., Nemeth, M. Z., Kovacs, G. M., Kiss, L., Tack, A. J. M. and Laine, A.-L.. 2014. "A hyperparasite affects the population dynamics of a wild plant pathogen." Molecular Ecology. 23 (23), pp. 5877-5887. https://doi.org/10.1111/mec.12908
First comprehensive phylogenetic analysis of the genus Erysiphe (Erysiphales, Erysiphaceae) I. The Microsphaera lineage
Takamatsu, Susumu, Ito, Hanako, Shiroya, Yoshiaki, Kiss, Levente and Heluta, Vasyl. 2015. "First comprehensive phylogenetic analysis of the genus Erysiphe (Erysiphales, Erysiphaceae) I. The Microsphaera lineage." Mycologia. 107 (3), pp. 475-489. https://doi.org/10.3852/15-007
Puccinia komarovii var. glanduliferae var. nov.: a fungal agent for the biological control of Himalayan balsam (Impatiens glandulifera)
Tanner, Robert A., Ellison, Carol A., Seier, Marion K., Kovacs, Gabor M., Kassai-Jager, Edit, Bereczky, Zsolt, Varia, Sonal, Djeddour, Djami, Singh, Mool Chand, Csiszar, Agnes, Csontos, Péter, Kiss, Levente and Evans, Harry C.. 2014. "Puccinia komarovii var. glanduliferae var. nov.: a fungal agent for the biological control of Himalayan balsam (Impatiens glandulifera)." European Journal of Plant Pathology. 141 (2), pp. 247-266. https://doi.org/10.1007/s10658-014-0539-x
First comprehensive phylogenetic analysis of the genus Erysiphe (Erysiphales, Erysiphaceae) II. The Uncinula lineage
Takamatsu, Susumu, Ito, Hanako, Shiroya, Yoshiaki, Kiss, Levente and Heluta, Vasyl. 2015. "First comprehensive phylogenetic analysis of the genus Erysiphe (Erysiphales, Erysiphaceae) II. The Uncinula lineage." Mycologia. 107 (5), pp. 903-914. https://doi.org/10.3852/15-062
Nuclear and chloroplast microsatellites show multiple introductions in the worldwide invasion history of common ragweed, Ambrosia artemisiifolia
Gaudeul, Myriam, Giraud, Tatiana, Kiss, Levente and Shykoff, Jacqui A.. 2011. "Nuclear and chloroplast microsatellites show multiple introductions in the worldwide invasion history of common ragweed, Ambrosia artemisiifolia." PLoS One. 6 (3). https://doi.org/10.1371/journal.pone.0017658
New records of microcyclic conidiogenesis in some powdery mildew fungi
Pintye, Alexandra, Legler, Sara Elisabetta and Kiss, Levente. 2011. "New records of microcyclic conidiogenesis in some powdery mildew fungi." Mycoscience. 52 (3), pp. 213-216. https://doi.org/10.1007/s10267-010-0093-0
Peach rusty spot is caused by the apple powdery mildew fungus, Podosphaera leucotricha
Jankovics, Tünde, Dolovac, Nenad, Bulajic, Aleksandra, Krstic, Branka, Pascal, Thierry, Bardin, Marc, Nicot, Philippe C. and Kiss, Levente. 2011. "Peach rusty spot is caused by the apple powdery mildew fungus, Podosphaera leucotricha." Plant Disease: an international journal of applied plant pathology. 95 (6), pp. 719-724. https://doi.org/10.1094/PDIS-10-10-0711
Limits of nuclear ribosomal DNA internal transcribed spacer (ITS) sequences as species barcodes for Fungi
Kiss, Levente. 2012. "Limits of nuclear ribosomal DNA internal transcribed spacer (ITS) sequences as species barcodes for Fungi." University of Adelaide. 109 (27), p. 1811. https://doi.org/10.1073/pnas.1207143109
Host phenology and geography as drivers of differentiation in generalist fungal mycoparasites
Pintye, Alexandra, Ropars, Jeanne, Harvey, Nick, Shin, Hyeon Dong, Leyronas, Christel, Nicot, Philippe C., Giraud, Tatiana and Kiss, Levente. 2015. "Host phenology and geography as drivers of differentiation in generalist fungal mycoparasites." PLoS One. 10 (3). https://doi.org/10.1371/journal.pone.0120703
Does the parasite follow its host? Occurrence of morphologically barely distinguishable powdery mildew anamorphs on Oenothera spp. in different parts of the world
Bereczky, Zsolt, Pintye, Alexandra, Csontos, Peter, Braun, Uwe and Kiss, Levente. 2015. "Does the parasite follow its host? Occurrence of morphologically barely distinguishable powdery mildew anamorphs on Oenothera spp. in different parts of the world." Mycoscience. 56 (3), pp. 267-272. https://doi.org/10.1016/j.myc.2014.08.001
Host jumps shaped the diversity of extant rust fungi (Pucciniales)
McTaggart, Alistair R., Shivas, Roger G., van der Nest, Magriet A., Roux, Jolanda, Wingfield, Brenda D. and Wingfield, Michael J.. 2015. "Host jumps shaped the diversity of extant rust fungi (Pucciniales)." New Phytologist. 209 (3), pp. 1149-1158. https://doi.org/10.1111/nph.13686
Synopsis of Phyllosticta in China
Zhang, Ke, Shivas, Roger G. and Cai, Lei. 2015. "Synopsis of Phyllosticta in China." Mycology. 6 (1), pp. 50-75. https://doi.org/10.1080/21501203.2015.1027507
Uredinopsis pteridis and Desmella aneimiae, the first rust fungi (Pucciniales) reported on ferns (Pteridophyta) in Australia
McTaggart, A. R., Geering, A. D. W. and Shivas, R. G.. 2014. "Uredinopsis pteridis and Desmella aneimiae, the first rust fungi (Pucciniales) reported on ferns (Pteridophyta) in Australia." Australasian Plant Pathology. 9 (1), pp. 149-152. https://doi.org/10.1007/s13314-014-0149-7
One stop shop: backbone trees for important phytopathogenic genera: I (2014)
Hyde, Kevin D., Nilsson, R. Henrik, Alias, S. Aisyah, Ariyawansa, Hiran A., Blair, Jaime E., Cai, Lei, de Cock, Arthur W. A. M., Dissanayake, Asha J., Glockling, Sally L., Goonasekara, Ishani D., Gorczak, Michal, Hahn, Matthias, Jayawardena, Ruvishika S., van Kan, Jan A. L., Lawrence, Matthew H., Levesque, C. Andre, Li, Xinghong, Liu, Jian-Kui, Maharachchikumbura, Sajeewa S. N., ..., Zhou, Nan. 2014. "One stop shop: backbone trees for important phytopathogenic genera: I (2014)." Fungal Diversity. 67 (1), pp. 21-125. https://doi.org/10.1007/s13225-014-0298-1
Cryptic fungal species unmasked
Shivas, Roger G. and Cai, Lei. 2012. "Cryptic fungal species unmasked." Microbiology Australia. 33 (1), pp. 36-37.
Polyphasic characterization of four new plant pathogenic Phyllosticta species from China, Japan, and the United States
Zhou, Nan, Chen, Qian, Carroll, George, Zhang, Ning, Shivas, Roger G. and Cai, Lei. 2015. "Polyphasic characterization of four new plant pathogenic Phyllosticta species from China, Japan, and the United States." Fungal Biology. 119 (5), pp. 433-466. https://doi.org/10.1016/j.funbio.2014.08.006
Puccinia psidii in Queensland, Australia: disease symptoms, distribution and impact
Pegg, G. S., Giblin, F. R., McTaggart, A. R., Guymer, G. P., Taylor, H., Ireland, K. B., Shivas, R. G. and Perry, S.. 2014. "Puccinia psidii in Queensland, Australia: disease symptoms, distribution and impact." Plant Pathology. 63 (5), pp. 1005-1021. https://doi.org/10.1111/ppa.12173
Two new Entyloma species (Entylomatales, Ustilaginomycota) from the USA
Denchev, Teodor T., Denchev, Cvetomir M. and Shivas, Roger G.. 2013. "Two new Entyloma species (Entylomatales, Ustilaginomycota) from the USA." Mycobiota. 3 (3), pp. 35-39. https://doi.org/10.12664/mycobiota.2013.03.04
Emended description of Anomalomyces (Ustilaginales), including Anomalomyces yakirrae sp. nov. on Yakirra paucifl pauciflora (Poaceae) from Australia
Shivas, Roger G., Lutz, Matthias, McTaggart, Alistair R. and Vanky, Kalman. 2013. "Emended description of Anomalomyces (Ustilaginales), including Anomalomyces yakirrae sp. nov. on Yakirra paucifl pauciflora (Poaceae) from Australia." Mycobiota. 1, pp. 17-24. https://doi.org/10.12664/mycobiota.2013.01.03
Eriocortex eriocauli, gen. et sp. nov. (Ustilaginomycetes) from Australia
Vanky, Kalman, Shivas, Roger G., Barrett, Matthew D. and Lutz, Matthias. 2013. "Eriocortex eriocauli, gen. et sp. nov. (Ustilaginomycetes) from Australia." Mycobiota. 1, pp. 9-16. https://doi.org/10.12664/mycobiota.2013.01.02
Aizoago, a new genus, and two new species of smut fungi (Ustilaginales) on Tetragonia (Aizoaceae) in Australia
Vanky, Kalman and Shivas, Roger G.. 2013. "Aizoago, a new genus, and two new species of smut fungi (Ustilaginales) on Tetragonia (Aizoaceae) in Australia." Mycobiota. 1, pp. 1-7. https://doi.org/10.12664/mycobiota.2013.01.01
First detection of tomato powdery mildew caused by Oidium neolycopersici in South Africa
Lebeda, A., Mieslerova, B., Jankovics, T., Kiss, L. and van der Linde, E. J.. 2015. "First detection of tomato powdery mildew caused by Oidium neolycopersici in South Africa." South African Journal of Botany. 99, pp. 153-157. https://doi.org/10.1016/j.sajb.2015.03.196
Carpogenic germination of sclerotia of Sclerotinia minor and ascosporic infection of pyrethrum flowers
O'Malley, Thomas B., Hay, Frank S., Scott, Jason B., Gent, David H., Shivas, Roger G. and Pethybridge, Sarah J.. 2015. "Carpogenic germination of sclerotia of Sclerotinia minor and ascosporic infection of pyrethrum flowers." Canadian Journal of Plant Pathology. 37 (2), pp. 179-187. https://doi.org/10.1080/07060661.2015.1036122
The Colletotrichum boninense species complex
Damm, U., Cannon, P. F., Woudenberg, J. H C., Johnston, P. R., Weir, B. S., Tan, Y. P., Shivas, R. G. and Crous, P. W.. 2012. "The Colletotrichum boninense species complex." Studies in Mycology. 73 (73), pp. 1-36. https://doi.org/10.3114/sim0002
Erratum to: Identification of rust fungi (Pucciniales) on species of Allium in Australia (Australasian Plant Pathology, (2016), 45, 6, (581-592), 10.1007/s13313-016-0445-0)
McTaggart, Alistair R., Shivas, Roger G., Doungsa-ard, Chanintorn, Weese, Terri L., Beasley, Dean R., Hall, Barbara H., Metcalf, Dean A. and Geering, Andrew D W. 2016. "Erratum to: Identification of rust fungi (Pucciniales) on species of Allium in Australia (Australasian Plant Pathology, (2016), 45, 6, (581-592), 10.1007/s13313-016-0445-0)." Australasian Plant Pathology. 45 (6), pp. 593-594. https://doi.org/10.1007/s13313-016-0451-2
Three new species of Tilletia on Eriachne from north-western Australia
Li, Ying-Ming, Shivas, Roger Graham and Cai, Lei. 2014. "Three new species of Tilletia on Eriachne from north-western Australia." Mycoscience. 55 (5), pp. 361-366. https://doi.org/10.1016/j.myc.2013.12.003
Pathogenicity studies in avocado with three nectriaceous fungi, Calonectria ilicicola, Gliocladiopsis sp. and Ilyonectria liriodendri
Dann, E. K., Cooke, A. W., Forsberg, L. I., Pegg, K. G., Tan, Y. P. and Shivas, R. G.. 2012. "Pathogenicity studies in avocado with three nectriaceous fungi, Calonectria ilicicola, Gliocladiopsis sp. and Ilyonectria liriodendri." Plant Pathology. 61 (5), pp. 896-902. https://doi.org/10.1111/j.1365-3059.2011.02579.x
Powdery mildews on Clitoria in Australia
Liberato, José R. and Shivas, Roger G.. 2012. "Powdery mildews on Clitoria in Australia." Australasian Plant Disease Notes. 7 (1), pp. 111-114. https://doi.org/10.1007/s13314-012-0060-z
Fungal planet description sheets: 128-153
Crous, P. W., Shivas, R. G., Wingfield, M. J., Summerell, B. A., Rossman, A. Y., Alves, J. L., Adams, G. C., Barreto, R. W., Bell, A., Coutinho, M. L., Lombard, L., Quaedvlieg, W., Videira, S. I R, Groenewald, J. Z., Tan, Y. P., Mahoney, D. P., Macedo, F., Flory, S. L., Gates, G., ..., Walker, D. M.. 2012. "Fungal planet description sheets: 128-153." Persoonia. 29, pp. 146-201. https://doi.org/10.3767/003158512X661589
Epitypification and neotypification: guidelines with appropriate and inappropriate examples
Ariyawansa, Hiran A., Hawksworth, David L., Hyde, Kevin D., Jones, E. B. Gareth, Maharachchikumbura, Sajeewa S. N., Manamgoda, Dimuthu S., Thambugala, Kasun M., Udayanga, Dhanushka, Camporesi, Erio, Daranagama, Anupama, Jayawardena, Ruvishika, Liu, Jian-Kui, McKenzie, Eric H. C., Phookamsak, Rungtiwa, Senanayake, Indunil C., Shivas, Roger G., Tian, Qing and Xu, Jian-Chu. 2014. "Epitypification and neotypification: guidelines with appropriate and inappropriate examples." Fungal Diversity. 69 (1), pp. 57-91. https://doi.org/10.1007/s13225-014-0315-4
Survey and prioritisation of potential biological control agents for prickly acacia (Acacia nilotica subsp. indica) in southern India
Dhileepan, Kunjithapatham, Balu, Ayyapillai, Murugesan, Selvaraj, Senthilkumar, Ponnusamy and Shivas, Roger G.. 2013. "Survey and prioritisation of potential biological control agents for prickly acacia (Acacia nilotica subsp. indica) in southern India." Biocontrol Science and Technology. 23 (6), pp. 646-664. https://doi.org/10.1080/09583157.2013.788689
Naming and outline of Dothideomycetes–2014 including proposals for the protection or suppression of generic names
Wijayawardene, Nalin N., Crous, Pedro W., Kirk, Paul M., Hawksworth, David L., Boonmee, Saranyaphat, Braun, Uwe, Dai, Dong Qin, D'souza, Melvina J., Diederich, Paul, Dissanayake, Asha, Phookamsak, Rungtiwa, Hyde, Kevin D., Doilom, Mingkhuan, Hongsanan, Singang, Jayawardena, Ruvishika, Liu, Jian-Kui, Manamgoda, Dimuthu S., Thambugala, Kasun M., Wanasinghe, Dhanushka N., ..., Jaklitsch, Walter M.. 2014. "Naming and outline of Dothideomycetes–2014 including proposals for the protection or suppression of generic names." Fungal Diversity. 69 (1), pp. 1-55. https://doi.org/10.1007/s13225-014-0309-2
Fungal planet description sheets: 92-106
Crous, P. W., Verkley, G. J M, Groenewald, J. Z., Summerell, B. A., Shivas, R. G., Romberg, M. and Mel'nik, V. A.. 2011. "Fungal planet description sheets: 92-106." Persoonia. 27, pp. 130-162. https://doi.org/10.3767/003158511X617561
A re-appraisal of Harknessia (Diaporthales), and the introduction of Harknessiaceae fam. nov
Crous, P. W., Summerell, B. A., Shivas, R. G., Carnegie, A. J. and Groenewald, J. Z.. 2012. "A re-appraisal of Harknessia (Diaporthales), and the introduction of Harknessiaceae fam. nov." Persoonia. 28, pp. 49-65. https://doi.org/10.3767/003158512X639791
The evolution of species concepts and species recognition criteria in plant pathogenic fungi
Cai, Lei, Giraud, Tatiana, Zhang, Ning, Cai, Guohong, Begerow, Dominik and Shivas, Roger G.. 2011. "The evolution of species concepts and species recognition criteria in plant pathogenic fungi." Fungal Diversity. 50 (1), pp. 121-133. https://doi.org/10.1007/s13225-011-0127-8
Soral synapomorphies are significant for the systematics of the Ustilago-Sporisorium-Macalpinomyces complex (Ustilaginaceae)
McTaggart, A. R., Shivas, R. G., Geering, A. D W, Callaghan, B., Vanky, K. and Scharaschkin, T.. 2012. "Soral synapomorphies are significant for the systematics of the Ustilago-Sporisorium-Macalpinomyces complex (Ustilaginaceae)." Persoonia. 29, pp. 63-77. https://doi.org/10.3767/003158512X660562
A review of the Ustilago-Sporisorium-Macalpinomyces complex
McTaggart, A. R., Shivas, R. G., Geering, A. D. W., Vanky, K. and Scharaschkin, T.. 2012. "A review of the Ustilago-Sporisorium-Macalpinomyces complex." Persoonia. 29, pp. 55-62. https://doi.org/10.3767/003158512X660283
Taxonomic revision of Ustilago, Sporisorium and Macalpinomyces
McTaggart, A. R., Shivas, R. G., Geering, A. D. W., Vanky, K. and Scharaschkin, T.. 2012. "Taxonomic revision of Ustilago, Sporisorium and Macalpinomyces." Persoonia. 29, pp. 116-132. https://doi.org/10.3767/003158512X661462
Fungal planet description sheets: 214-280
Crous, P. W., Shivas, R. G., Quaedvlieg, W., Lombard, L., Groenewald, J. Z., van der Bank, M., Zhang, Y., Summerell, B. A., Guarro, J., Wingfield, M. J., Tan, Y. P., Cano-Lira, J. F., García, D., Marin-Felix, Y., Alvarado, P., Gené, J., Hernández-Restrepo, M., Marin-Felix, Y., Stchigel, A. M., ..., Wong, P. T. W.. 2014. "Fungal planet description sheets: 214-280." Persoonia. 32, pp. 184-306. https://doi.org/10.3767/003158514X682395
Fungal planet description sheets: 371–399
Crous, P. W., Wingfield, M. J., Le Roux, J. J., Richardson, D. M., Strasberg, D., Shivas, R. G., Alvarado, P., Edwards, J., Moreno, G., Sharma, R., Sonawane, M. S., Tan, Y. P., Altes, A., Barasubiye, T., Barnes, C. W., Blanchette, R. A., Boertmann, D., Bogo, A., Carlavilla, J. R., ..., Groenewald, J. Z.. 2015. "Fungal planet description sheets: 371–399." Persoonia. 35, pp. 264-327. https://doi.org/10.3767/003158515X690269
Fungal planet description sheets: 469-557
Crous, P. W., Wingfield, M. J., Burgess, T. I., Hardy, G. E. St. J., Crane, C., Barrett, S., Cano-Lira, J. F., Le Roux, J. J., Thangavel, R., Guarro, J., Stchigel, A. M., Martin, M. P., Alfredo, D. S., Barber, P. A., Barreto, R. W., Baseia, I. G., Cano-Canals, J., Cheewangkoon, R., Ferreira, R. J., ..., Groenewald, J. Z.. 2016. "Fungal planet description sheets: 469-557." Persoonia. 37, pp. 218-403. https://doi.org/10.3767/003158516X694499
The rusts on Goodeniaceae and Stylidiaceae
McTaggart, A. R., Geering, A. D. W. and Shivas, R. G.. 2014. "The rusts on Goodeniaceae and Stylidiaceae." Mycological Progress: international journal of fungal sciences. 13 (4), pp. 1017-1025. https://doi.org/10.1007/s11557-014-0989-8
Phylogeny and taxonomy of the genus Cylindrocladiella
Lombard, L., Shivas, R. G., To-Anun, C. and Crous, P. W.. 2012. "Phylogeny and taxonomy of the genus Cylindrocladiella." Mycological Progress: international journal of fungal sciences. 11 (4), pp. 835-868. https://doi.org/10.1007/s11557-011-0799-1
Sporisorium warambiense sp. nov., a fourth smut fungus on Xerochloa in Australia
Piatek, Marcin and Shivas, Roger G.. 2011. "Sporisorium warambiense sp. nov., a fourth smut fungus on Xerochloa in Australia." Mycological Progress: international journal of fungal sciences. 10 (1), pp. 57-60. https://doi.org/10.1007/s11557-010-0673-6
Real-time PCR assays for the detection of Puccinia psidii
Baskarathevan, Jeyaseelan, Taylor, R. K., Ho, W., Alexander, B. J. R., McDougal, R. L. and Shivas, R. G.. 2016. "Real-time PCR assays for the detection of Puccinia psidii." Plant Disease: an international journal of applied plant pathology. 100 (3), pp. 617-624. https://doi.org/10.1094/PDIS-08-15-0851-RE
First report of Didymella americana on baby lima bean (Phaseolus lunatus)
Gorny, Adrienne M., Pethybridge, Sarah J., Kikkert, Julie R. and Shivas, Roger G.. 2016. "First report of Didymella americana on baby lima bean (Phaseolus lunatus)." Canadian Journal of Plant Pathology. 38 (3), pp. 389-394. https://doi.org/10.1080/07060661.2016.1195877
Colletotrichum siamense, C. theobromicola and C. queenslandicum, from several plant species and the identification of C. asianum in the Northern Territory, Australia
James, R. S., Ray, J., Tan, Y. P. and Shivas, R. G.. 2014. "Colletotrichum siamense, C. theobromicola and C. queenslandicum, from several plant species and the identification of C. asianum in the Northern Territory, Australia." Australasian Plant Disease Notes. 9 (1), pp. 138-138. https://doi.org/10.1007/s13314-014-0138-x
Elucidation of the taxonomy and pathological status of Pyricularia associated with banana blast in Australia
Male, Mike F., Tan, Yu Pei, Vawdrey, Lynton L. and Shivas, Roger G.. 2011. "Elucidation of the taxonomy and pathological status of Pyricularia associated with banana blast in Australia." Australasian Plant Disease Notes. 6 (1), pp. 22-25. https://doi.org/10.1007/s13314-011-0008-8
First report of shoot blight of persimmon caused by Diaporthe neotheicola in Australia
Golzar, H., Wang, C., Tan, Y. P. and Shivas, R. G.. 2012. "First report of shoot blight of persimmon caused by Diaporthe neotheicola in Australia." Australasian Plant Disease Notes. 7 (1), pp. 115-117. https://doi.org/10.1007/s13314-012-0061-y
First report of Phoma multirostrata in Australia
Golzar, H., Lanoiselet, V., Wang, C., Tan, Y. P. and Shivas, R. G.. 2015. "First report of Phoma multirostrata in Australia." Australasian Plant Disease Notes. 10 (1), pp. 8-9. https://doi.org/10.1007/s13314-015-0161-6
A new host genus and species (Afzelia xylocarpa) for Phakopsora pachyrhizi found in Thailand
Seemadua, Suneerat, Bhasabutra, Tharntip, Beasley, Dean R., Tan, Yu Pei and Shivas, Roger G.. 2012. "A new host genus and species (Afzelia xylocarpa) for Phakopsora pachyrhizi found in Thailand." Australasian Plant Disease Notes. 7 (1), pp. 125-126. https://doi.org/10.1007/s13314-012-0064-8
First record of Prospodium appendiculatum on Tecoma stans in Thailand
Bhasabutra, Tharntip, Seemadua, Suneerat and Shivas, Roger G.. 2012. "First record of Prospodium appendiculatum on Tecoma stans in Thailand." Australasian Plant Disease Notes. 7 (1), pp. 123-124. https://doi.org/10.1007/s13314-012-0063-9
Recovery, pathogenicity and molecular sequencing of Calonectria ilicicola which causes collar rot on Carica papaya in Australia
Male, M. F., Tan, Y. P., Vawdrey, L. L. and Shivas, R. G.. 2012. "Recovery, pathogenicity and molecular sequencing of Calonectria ilicicola which causes collar rot on Carica papaya in Australia." Australasian Plant Disease Notes. 7 (1), pp. 137-138. https://doi.org/10.1007/s13314-012-0068-4
Thekopsora minima causes blueberry rust in south-eastern Queensland and northern New South Wales
McTaggart, A. R., Geering, A. D. W. and Shivas, R. G.. 2013. "Thekopsora minima causes blueberry rust in south-eastern Queensland and northern New South Wales." Australasian Plant Disease Notes. 8 (1), pp. 81-83. https://doi.org/10.1007/s13314-013-0101-2
First report of Vialaea minutella in Australia, its association with mango branch dieback and systematic placement of Vialaea in the Xylariales
McTaggart, A. R., Grice, K. R. and Shivas, R. G.. 2013. "First report of Vialaea minutella in Australia, its association with mango branch dieback and systematic placement of Vialaea in the Xylariales." Australasian Plant Disease Notes. 8 (1), pp. 63-66. https://doi.org/10.1007/s13314-013-0096-8
First report of Masseeëlla capparis in Australia
Liberato, J. R., McTaggart, A. R. and Shivas, R. G.. 2014. "First report of Masseeëlla capparis in Australia." Australasian Plant Disease Notes. 9 (1), pp. 121-125. https://doi.org/10.1007/s13314-013-0121-y
A co-evolutionary relationship exists between Endoraecium (Pucciniales) and its acacia hosts in Australia
McTaggart, A. R., Doungsa-Ard, C., Geering, A. D. W., Shivas, R. G. and Aime, M. C.. 2015. "A co-evolutionary relationship exists between Endoraecium (Pucciniales) and its acacia hosts in Australia." Persoonia. 35, pp. 50-62. https://doi.org/10.3767/003158515X687588
Confirmation of Paracercospora egenula causing leaf spot of eggplant in Hawaii
Vaghefi, Niloofar, Pethybridge, Sarah J., Shivas, Roger G. and Nelson, Scot C.. 2016. "Confirmation of Paracercospora egenula causing leaf spot of eggplant in Hawaii." Australasian Plant Disease Notes. 11 (1), pp. 35-37. https://doi.org/10.1007/s13314-016-0223-4
Plasmopara sphagneticolae sp. nov. (Peronosporales) on Sphagneticola (Asteraceae) in Australia
McTaggart, Alistair R., Shuey, Louise S., McKenna, Stephen G., Davis, Richard I. and Shivas, Roger G.. 2015. "Plasmopara sphagneticolae sp. nov. (Peronosporales) on Sphagneticola (Asteraceae) in Australia." Australasian Plant Pathology. 44 (1), pp. 81-85. https://doi.org/10.1007/s13313-014-0323-6
Fungi associated with foliar diseases of wild and cultivated rice (Oryza spp.) in northern Queensland
Khemmuk, Wanporn, Henry, Robert J., Geering, Andrew D. W. and Shivas, Roger G.. 2016. "Fungi associated with foliar diseases of wild and cultivated rice (Oryza spp.) in northern Queensland." Australasian Plant Pathology. 45 (3), pp. 297-308. https://doi.org/10.1007/s13313-016-0418-3
Review of Fusarium species isolated in association with mango malformation in Australia
Liew, E. C. Y., Laurence, M. H., Pearce, C. A., Shivas, R. G., Johnson, G. I., Tan, Y. P., Edwards, J., Perry, S., Cooke, A. W. and Summerell, B. A.. 2016. "Review of Fusarium species isolated in association with mango malformation in Australia." Australasian Plant Pathology. 45 (6), pp. 547-559. https://doi.org/10.1007/s13313-016-0454-z
Detection of Fusarium oxysporum f. sp. cubense tropical race 4 strain in northern Queensland
O'Neill, W. T., Pattemore, J. A., Perry, S., Beasley, D. R., Tan, Y. P., Smyth, A. L., Goosem, C. H., Thomson, K. M., Hobbs, R. L., Shivas, R. G., Henderson, J., O'Dwyer, C., Grice, K. R. E., Trevorrow, P., Pathania, N. and Vawdrey, L. L.. 2016. "Detection of Fusarium oxysporum f. sp. cubense tropical race 4 strain in northern Queensland." Australasian Plant Disease Notes. 11 (33), pp. 33-35. https://doi.org/10.1007/s13314-016-0218-1
Uromycladium falcatarium sp. nov., the cause of gall rust on Paraserianthes falcataria in south-east Asia
Doungsa-ard, Chanintorn, McTaggart, Alistair R., Geering, Andrew D. W., Dalisay, Teresita U., Ray, Jane and Shivas, Roger G.. 2015. "Uromycladium falcatarium sp. nov., the cause of gall rust on Paraserianthes falcataria in south-east Asia." Australasian Plant Pathology. 44 (1), pp. 25-30. https://doi.org/10.1007/s13313-014-0301-z
Towards a universal barcode of oomycetes - a comparison of the cox1 and cox2 loci
Choi, Young Joon, Kruse, Julia, Nam, Bora, Nigrelli, Lisa, Telle, Sabine, Thines, Marco, Ploch, Sebastian, Beakes, Gordon, Glockling, Sally, Shin, Hyeon Dong, Shivas, Roger G. and Voglmayr, Hermann. 2015. "Towards a universal barcode of oomycetes - a comparison of the cox1 and cox2 loci." Molecular Ecology Resources. 15 (6), pp. 1275-1288. https://doi.org/10.1111/1755-0998.12398
Identification of rust fungi (Pucciniales) on species of Allium in Australia
McTaggart, Alistair R., Shivas, Roger G., Doungsa-ard, Chanintorn, Weese, Terri L., Beasley, Dean R., Hall, Barbara H., Metcalf, Dean A. and Geering, Andrew D. W.. 2016. "Identification of rust fungi (Pucciniales) on species of Allium in Australia." Australasian Plant Pathology. 45 (6), pp. 581-592. https://doi.org/10.1007/s13313-016-0445-0
First report of Hemileia wrightiae on Wrightia spp. in Australia
Liberato, J. R. and Shivas, R. G.. 2011. "First report of Hemileia wrightiae on Wrightia spp. in Australia." Australasian Plant Disease Notes. 6 (1), pp. 80-83. https://doi.org/10.1007/s13314-011-0028-4
Refining a method for ascospore viability testing in overwintering chasmothecia of Erysiphe necator
Vagi, Pal, Caffi, Tito, Vaczy, Kalman Zoltan, Nemeth, Mark Z. and Kiss, Levente. 2016. "Refining a method for ascospore viability testing in overwintering chasmothecia of Erysiphe necator." European Journal of Plant Pathology. 144 (4), pp. 799-802. https://doi.org/10.1007/s10658-015-0797-2
Sporulation rate in culture and mycoparasitic activity, but not mycohost specificity, are the key factors for selecting Ampelomyces strains for biocontrol of grapevine powdery mildew (Erysiphe necator)
Legler, Sara Elisabetta, Pintye, Alexandra, Caffi, Tito, Gulyas, Szilvia, Bohar, Gyula, Rossi, Vittorio and Kiss, Levente. 2016. "Sporulation rate in culture and mycoparasitic activity, but not mycohost specificity, are the key factors for selecting Ampelomyces strains for biocontrol of grapevine powdery mildew (Erysiphe necator)." European Journal of Plant Pathology. 144 (4), pp. 723-736. https://doi.org/10.1007/s10658-015-0834-1
Molecular identification and pathogenicity assessment of a rust fungus infecting common ragweed (Ambrosia artemisiifolia) in its native North American range
Kassai-Jager, Edit, Seier, Marion K., Evans, Harry C. and Kiss, Levente. 2016. "Molecular identification and pathogenicity assessment of a rust fungus infecting common ragweed (Ambrosia artemisiifolia) in its native North American range." European Journal of Plant Pathology. 145 (1), pp. 81-87. https://doi.org/10.1007/s10658-015-0815-4
Ramichloridium spp. on Musa in northern Queensland: introducing Ramichloridium ducassei sp. nov. on leaf streaks of Ducasse banana
Shivas, R. G., Grice, K. R. E. and Young, A. J.. 2011. "Ramichloridium spp. on Musa in northern Queensland: introducing Ramichloridium ducassei sp. nov. on leaf streaks of Ducasse banana." Australasian Plant Pathology. 40 (1), pp. 61-65. https://doi.org/10.1007/s13313-010-0014-x
Green and brown bridges between weeds and crops reveal novel Diaporthe species in Australia
Thompson, S. M., Tan, Y. P., Shivas, R. G., Neate, S. M., Morin, L., Bissett, A. and Aitken, E. A. B.. 2015. "Green and brown bridges between weeds and crops reveal novel Diaporthe species in Australia." Persoonia. 35, pp. 39-49. https://doi.org/10.3767/003158515X687506
Fungal Planet description sheets: 281-319
Crous, P., Wingfield, M., Schumacher, R., Summerell, B., Giraldo, A., Gene, J., Guarro, J., Wanasinghe, D., Hyde, K., Camporesi, E., Jones, E., Thambugala, K., Malysheva, E., Malysheva, V., Acharya, K., Alvarez, J., Alvarado, P., Assefa, A., Barnes, C. W., ..., Groenewald, J.. 2014. "Fungal Planet description sheets: 281-319." Persoonia. 33, pp. 212-292. https://doi.org/10.3767/003158514X685680
Fusarium thapsinum is the dominant species associated with sorghum stalk rot in Queensland and northern New South Wales
Kelly, L., Tan, Y. P., Ryley, M. and Aitken, E.. 2011. "Fusarium thapsinum is the dominant species associated with sorghum stalk rot in Queensland and northern New South Wales." Tran-Nguyen, Lucy (ed.) 4th Asian Conference on Plant Pathology and the 18th Biennial Australasian Plant Pathology Society Conference (ACPP/APPS 2011): New Frontiers in Plant Pathology for Asia and Oceania. Darwin, Australia 26 - 29 Apr 2011 Toowoomba, Australia.
Stem cankers on sunflower (Helianthus annuus) in Australia reveal a complex of pathogenic Diaporthe (Phomopsis) species
Thompson, S. M., Tan, Y. P., Young, A. J., Neate, S. M., Aitken, E. A. B. and Shivas, R. G.. 2011. "Stem cankers on sunflower (Helianthus annuus) in Australia reveal a complex of pathogenic Diaporthe (Phomopsis) species." Persoonia. 27, pp. 80-89. https://doi.org/10.3767/003158511X617110
First report of the smut fungus Ustanciosporium appendiculatum in Australia
Shivas, R. G., McTaggart, A. R., Ryley, M. J., Scharaschkin, T. and Gambley, C. F.. 2010. "First report of the smut fungus Ustanciosporium appendiculatum in Australia." Australasian Plant Disease Notes. 5 (1), pp. 17-18. https://doi.org/10.1071/DN10007
Molecular phylogenetic analysis of Peronosclerospora (Oomycetes) reveals cryptic species and genetically distinct species parasitic to maize
Telle, Sabine, Shivas, Roger G., Ryley, Malcolm J. and Thines, Marco. 2011. "Molecular phylogenetic analysis of Peronosclerospora (Oomycetes) reveals cryptic species and genetically distinct species parasitic to maize." European Journal of Plant Pathology. 130 (4), pp. 521-528. https://doi.org/10.1007/s10658-011-9772-8
Peronosclerospora australiensis sp. nov. and Peronosclerospora sargae sp. nov., two newly recognised downy mildews in northern Australia, and their biosecurity implications
Shivas, R. G., Ryley, M. J ., Telle, S., Liberato, J. R. and Thines, M.. 2012. "Peronosclerospora australiensis sp. nov. and Peronosclerospora sargae sp. nov., two newly recognised downy mildews in northern Australia, and their biosecurity implications." Australasian Plant Pathology. 41 (2), pp. 125-130. https://doi.org/10.1007/s13313-011-0097-z
First report of the powdery mildew Erysiphe diffusa on soybean in Australia
McTaggart, A. R., Ryley, M. J. and Shivas, R. G.. 2012. "First report of the powdery mildew Erysiphe diffusa on soybean in Australia." Australasian Plant Disease Notes. 7 (1), pp. 127-129. https://doi.org/10.1007/s13314-012-0065-7
Indigenous fungi as pathogens of crops: some examples from Australia
Ryley, Malcolm and Shivas, Roger. 2013. "Indigenous fungi as pathogens of crops: some examples from Australia." Asian Mycological Congress 2013 and 13th International Marine and Freshwater Mycology Symposium (AMC 2013). Beijing, China 19 - 23 Aug 2103 Beijing, China.
Phyllosticta spp. on cultivated Citrus in Australia
Miles, A. K., Tan, Y. P., Tan, M. K., Donovan, N. J., Ghalayini, A. and Drenth, A.. 2013. "Phyllosticta spp. on cultivated Citrus in Australia ." Australasian Plant Pathology. 42 (4), pp. 461-467. https://doi.org/10.1007/s13313-013-0208-0
Xanthones from a microfungus of the genus Xylaria
Healy, Peter C., Hocking, Ailsa, Tran-Dinh, Nai, Pitt, John I., Shivas, Roger G., Mitchell, Jennifer K., Kotiw, Mike and Davis, Rohan A.. 2004. "Xanthones from a microfungus of the genus Xylaria." Phytochemistry: the international journal of plant chemistry, plant biochemistry and molecular biology. 65 (16), pp. 2373-2378. https://doi.org/10.1016/j.phytochem.2004.07.019
Phomoxins B and C: polyketides from an endophytic fungus of the genus eupenicillium
Davis, Rohan A., Andjic, Vesna, Kotiw, Michael and Shivas, Roger G.. 2005. "Phomoxins B and C: polyketides from an endophytic fungus of the genus eupenicillium." Phytochemistry: the international journal of plant chemistry, plant biochemistry and molecular biology. 66 (23), pp. 2771-2775. https://doi.org/10.1016/j.phytochem.2005.09.004
A case for re-inventory of Australia's plant pathogens
Hyde, K. D., Chomnunti, P., Crous, P. W., Groenewald, J. Z., Damm, U., Ko, T. W. Ko, Shivas, R. G., Summerell, B. A. and Tan, Y. P.. 2010. "A case for re-inventory of Australia's plant pathogens." Persoonia. 25, pp. 50-60. https://doi.org/10.3767/003158510X548668
Austropleospora osteospermi gen. et sp. nov. and its host specificity and distribution on Chrysanthemoides monilifera ssp. rotundata in Australia
Morin, Louise, Shivas, R. G., Piper, M. C. and Tan, Y. P.. 2010. "Austropleospora osteospermi gen. et sp. nov. and its host specificity and distribution on Chrysanthemoides monilifera ssp. rotundata in Australia ." Fungal Diversity. 40 (1), pp. 65-74. https://doi.org/10.1007/s13225-009-0007-7
Random Mutagenesis Identifies Novel Genes Involved in the Secretion of Antimicrobial, Cell Wall-Lytic Enzymes by Lactococcus lactis
Tan, Yu Pei, Giffard, Philip M., Barry, Daniel G., Huston, Wilhelmina M. and Turner, Mark S.. 2008. "Random Mutagenesis Identifies Novel Genes Involved in the Secretion of Antimicrobial, Cell Wall-Lytic Enzymes by Lactococcus lactis." Applied and Environmental Microbiology. 74 (24), pp. 7490-7496. https://doi.org/10.1128/AEM.00767-08
Inactivation of an Iron Transporter in Lactococcus lactis Results in Resistance to Tellurite and Oxidative Stress
Turner, Mark S., Tan, Yu Pei and Giffard, Philip M.. 2007. "Inactivation of an Iron Transporter in Lactococcus lactis Results in Resistance to Tellurite and Oxidative Stress." Applied and Environmental Microbiology. 73 (19), pp. 6144-6149. https://doi.org/10.1128/AEM.00413-07