Development of Debiasing Technique for Lung Nodule Chest X-ray Datasets to Generalize Deep Learning Models
Article
Article Title | Development of Debiasing Technique for Lung Nodule Chest X-ray Datasets to Generalize Deep Learning Models |
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ERA Journal ID | 34304 |
Article Category | Article |
Authors | Horry, Michael J., Chakraborty, Subrata, Pradhan, Biswajeet, Paul, Manoranjan, Zhu, Jing, Loh, Hui Wen, Barua, Prabal Datta and Acharya, U. Rajendra |
Journal Title | Sensors |
Journal Citation | 23 (14) |
Article Number | 6585 |
Number of Pages | 21 |
Year | 2023 |
Publisher | MDPI AG |
Place of Publication | Switzerland |
ISSN | 1424-8220 |
1424-8239 | |
Digital Object Identifier (DOI) | https://doi.org/10.3390/s23146585 |
Web Address (URL) | https://www.mdpi.com/1424-8220/23/14/6585 |
Abstract | Screening programs for early lung cancer diagnosis are uncommon, primarily due to the challenge of reaching at-risk patients located in rural areas far from medical facilities. To overcome this obstacle, a comprehensive approach is needed that combines mobility, low cost, speed, accuracy, and privacy. One potential solution lies in combining the chest X-ray imaging mode with federated deep learning, ensuring that no single data source can bias the model adversely. This study presents a pre-processing pipeline designed to debias chest X-ray images, thereby enhancing internal classification and external generalization. The pipeline employs a pruning mechanism to train a deep learning model for nodule detection, utilizing the most informative images from a publicly available lung nodule X-ray dataset. Histogram equalization is used to remove systematic differences in image brightness and contrast. Model training is then performed using combinations of lung field segmentation, close cropping, and rib/bone suppression. The resulting deep learning models, generated through this pre-processing pipeline, demonstrate successful generalization on an independent lung nodule dataset. By eliminating confounding variables in chest X-ray images and suppressing signal noise from the bone structures, the proposed deep learning lung nodule detection algorithm achieves an external generalization accuracy of 89%. This approach paves the way for the development of a low-cost and accessible deep learning-based clinical system for lung cancer screening. |
Keywords | chest X-ray; federated learning; deep learning; confounding bias; model generalization; lung cancer |
ANZSRC Field of Research 2020 | 400306. Computational physiology |
Byline Affiliations | University of Technology Sydney |
IBM, Australia | |
University of New England | |
National University of Malaysia | |
Charles Sturt University | |
Westmead Hospital, Australia | |
Singapore University of Social Sciences (SUSS), Singapore | |
School of Business | |
Cogninet Australia, Australia | |
School of Mathematics, Physics and Computing |
https://research.usq.edu.au/item/z1v9x/development-of-debiasing-technique-for-lung-nodule-chest-x-ray-datasets-to-generalize-deep-learning-models
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